EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000003281 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 1991 bases
Position: chr9:1867764-1869754
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000006739	Methyltransf_8	PF05148.15	1.3e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000006739	-	991	-	ENSCINP00000006739	315 (aa)	-	F6WNH2

Gene Model

Click here to download ENSCING00000003281's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000003281's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000003281	-	88	35.737	ENSACIG00000019896	rrp8	65	36.593	Amphilophus_citrinellus
ENSCING00000003281	-	88	36.503	ENSAOCG00000008785	rrp8	57	36.012	Amphiprion_ocellaris
ENSCING00000003281	-	88	37.383	ENSAPEG00000008416	rrp8	57	36.310	Amphiprion_percula
ENSCING00000003281	-	89	35.866	ENSATEG00000014110	rrp8	61	35.866	Anabas_testudineus
ENSCING00000003281	-	88	37.582	ENSACLG00000002746	rrp8	56	38.312	Astatotilapia_calliptera
ENSCING00000003281	-	88	36.721	ENSAMXG00000005164	rrp8	57	37.049	Astyanax_mexicanus
ENSCING00000003281	-	100	51.534	ENSCSAVG00000006435	-	77	51.534	Ciona_savignyi
ENSCING00000003281	-	84	32.624	ENSCGRG00001003103	Rrp8	60	32.624	Cricetulus_griseus_chok1gshd
ENSCING00000003281	-	84	32.624	ENSCGRG00000014009	Rrp8	60	32.624	Cricetulus_griseus_crigri
ENSCING00000003281	-	83	36.304	ENSCSEG00000007330	rrp8	77	35.644	Cynoglossus_semilaevis
ENSCING00000003281	-	91	34.328	ENSCVAG00000012032	rrp8	59	34.328	Cyprinodon_variegatus
ENSCING00000003281	-	87	35.577	ENSDARG00000071652	rrp8	56	35.256	Danio_rerio
ENSCING00000003281	-	88	37.634	ENSGMOG00000007188	rrp8	73	37.193	Gadus_morhua
ENSCING00000003281	-	91	35.202	ENSGAFG00000012331	rrp8	71	35.202	Gambusia_affinis
ENSCING00000003281	-	88	39.568	ENSGACG00000011343	rrp8	70	39.568	Gasterosteus_aculeatus
ENSCING00000003281	-	88	38.889	ENSHBUG00000017131	rrp8	56	38.889	Haplochromis_burtoni
ENSCING00000003281	-	87	35.897	ENSIPUG00000017733	rrp8	57	35.897	Ictalurus_punctatus
ENSCING00000003281	-	88	35.202	ENSKMAG00000009229	rrp8	58	35.202	Kryptolebias_marmoratus
ENSCING00000003281	-	87	37.710	ENSLOCG00000009591	rrp8	55	37.710	Lepisosteus_oculatus
ENSCING00000003281	-	59	38.462	ENSLOCG00000013776	-	62	38.462	Lepisosteus_oculatus
ENSCING00000003281	-	88	38.235	ENSMZEG00005008926	rrp8	56	38.312	Maylandia_zebra
ENSCING00000003281	-	88	38.511	ENSNBRG00000023416	rrp8	75	38.511	Neolamprologus_brichardi
ENSCING00000003281	-	83	35.889	ENSONIG00000016861	rrp8	70	36.897	Oreochromis_niloticus
ENSCING00000003281	-	88	36.646	ENSORLG00020011413	rrp8	56	36.646	Oryzias_latipes_hni
ENSCING00000003281	-	88	38.333	ENSPNYG00000002878	rrp8	55	39.333	Pundamilia_nyererei
ENSCING00000003281	-	97	33.540	ENSPNAG00000024779	rrp8	61	34.056	Pygocentrus_nattereri
ENSCING00000003281	-	57	38.679	YDR083W	-	51	38.679	Saccharomyces_cerevisiae
ENSCING00000003281	-	93	35.362	ENSSFOG00015003917	rrp8	61	34.694	Scleropages_formosus
ENSCING00000003281	-	87	35.714	ENSSLDG00000000521	rrp8	58	35.714	Seriola_lalandi_dorsalis
ENSCING00000003281	-	88	36.875	ENSTRUG00000021812	rrp8	58	36.875	Takifugu_rubripes
ENSCING00000003281	-	91	34.069	ENSXMAG00000005011	rrp8	66	35.423	Xiphophorus_maculatus