EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000003312 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 6193 bases
Position: chrHT000119.1:247315-253507
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000006800	PRP3	PF08572.10	5.5e-72	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000006800	-	1784	-	ENSCINP00000006800	407 (aa)	-	F6TBF9

Gene Model

Click here to download ENSCING00000003312's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000003312's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000003312	-	99	58.711	ENSG00000117360	PRPF3	61	59.189	Homo_sapiens
ENSCING00000003312	-	99	59.615	ENSAPOG00000015584	prpf3	59	59.615	Acanthochromis_polyacanthus
ENSCING00000003312	-	99	58.711	ENSAMEG00000001630	PRPF3	61	59.189	Ailuropoda_melanoleuca
ENSCING00000003312	-	99	60.732	ENSACIG00000007876	prpf3	58	60.732	Amphilophus_citrinellus
ENSCING00000003312	-	99	59.856	ENSAOCG00000011449	prpf3	59	59.856	Amphiprion_ocellaris
ENSCING00000003312	-	99	59.809	ENSATEG00000023583	prpf3	59	59.809	Anabas_testudineus
ENSCING00000003312	-	99	58.810	ENSAPLG00000002440	PRPF3	61	59.524	Anas_platyrhynchos
ENSCING00000003312	-	99	58.333	ENSACAG00000003176	PRPF3	61	58.810	Anolis_carolinensis
ENSCING00000003312	-	99	58.711	ENSANAG00000026138	PRPF3	61	59.189	Aotus_nancymaae
ENSCING00000003312	-	99	60.048	ENSACLG00000020127	prpf3	60	60.048	Astatotilapia_calliptera
ENSCING00000003312	-	100	58.195	ENSAMXG00000007306	prpf3	59	58.195	Astyanax_mexicanus
ENSCING00000003312	-	99	58.711	ENSBTAG00000013946	PRPF3	61	59.189	Bos_taurus
ENSCING00000003312	-	89	48.404	WBGene00010844	prp-3	60	48.404	Caenorhabditis_elegans
ENSCING00000003312	-	99	58.711	ENSCJAG00000009926	PRPF3	61	59.189	Callithrix_jacchus
ENSCING00000003312	-	99	58.711	ENSCAFG00000011820	PRPF3	61	59.189	Canis_familiaris
ENSCING00000003312	-	71	61.379	ENSCAFG00020019653	PRPF3	52	61.379	Canis_lupus_dingo
ENSCING00000003312	-	99	58.711	ENSCHIG00000015434	PRPF3	61	59.189	Capra_hircus
ENSCING00000003312	-	99	58.711	ENSTSYG00000001383	PRPF3	61	59.189	Carlito_syrichta
ENSCING00000003312	-	99	55.000	ENSCAPG00000017812	PRPF3	65	55.396	Cavia_aperea
ENSCING00000003312	-	99	58.711	ENSCPOG00000008068	PRPF3	61	59.189	Cavia_porcellus
ENSCING00000003312	-	99	58.711	ENSCCAG00000026380	PRPF3	61	59.189	Cebus_capucinus
ENSCING00000003312	-	94	47.512	ENSCATG00000041778	PRPF3	54	51.117	Cercocebus_atys
ENSCING00000003312	-	99	58.711	ENSCLAG00000015009	PRPF3	61	59.189	Chinchilla_lanigera
ENSCING00000003312	-	99	58.095	ENSCPBG00000008216	PRPF3	61	58.670	Chrysemys_picta_bellii
ENSCING00000003312	-	100	83.894	ENSCSAVG00000008720	-	72	83.894	Ciona_savignyi
ENSCING00000003312	-	99	58.711	ENSCANG00000036769	PRPF3	61	59.189	Colobus_angolensis_palliatus
ENSCING00000003312	-	99	58.711	ENSCGRG00001019100	Prpf3	61	59.189	Cricetulus_griseus_chok1gshd
ENSCING00000003312	-	99	58.711	ENSCGRG00000007322	Prpf3	61	59.189	Cricetulus_griseus_crigri
ENSCING00000003312	-	99	59.662	ENSCSEG00000002532	prpf3	65	59.662	Cynoglossus_semilaevis
ENSCING00000003312	-	99	58.894	ENSCVAG00000009318	prpf3	59	59.135	Cyprinodon_variegatus
ENSCING00000003312	-	100	58.852	ENSDARG00000086425	prpf3	59	58.852	Danio_rerio
ENSCING00000003312	-	99	58.950	ENSDNOG00000005904	PRPF3	65	59.427	Dasypus_novemcinctus
ENSCING00000003312	-	99	58.950	ENSDORG00000008664	Prpf3	65	59.427	Dipodomys_ordii
ENSCING00000003312	-	99	54.067	FBgn0036915	Prp3	78	54.067	Drosophila_melanogaster
ENSCING00000003312	-	99	57.995	ENSETEG00000019124	PRPF3	61	58.473	Echinops_telfairi
ENSCING00000003312	-	99	57.820	ENSEBUG00000011680	prpf3	57	57.820	Eptatretus_burgeri
ENSCING00000003312	-	99	58.711	ENSEASG00005001566	PRPF3	61	59.189	Equus_asinus_asinus
ENSCING00000003312	-	99	58.711	ENSECAG00000019840	PRPF3	61	59.189	Equus_caballus
ENSCING00000003312	-	99	54.893	ENSEEUG00000007338	PRPF3	61	55.370	Erinaceus_europaeus
ENSCING00000003312	-	100	50.120	ENSELUG00000013624	prpf3	56	50.120	Esox_lucius
ENSCING00000003312	-	99	58.711	ENSFCAG00000013940	PRPF3	61	59.189	Felis_catus
ENSCING00000003312	-	99	58.711	ENSFDAG00000010365	PRPF3	61	59.189	Fukomys_damarensis
ENSCING00000003312	-	99	59.375	ENSFHEG00000021746	prpf3	60	59.615	Fundulus_heteroclitus
ENSCING00000003312	-	100	58.993	ENSGMOG00000008535	prpf3	59	58.993	Gadus_morhua
ENSCING00000003312	-	99	58.810	ENSGALG00000028205	PRPF3	61	59.524	Gallus_gallus
ENSCING00000003312	-	99	59.135	ENSGAFG00000012671	prpf3	60	59.375	Gambusia_affinis
ENSCING00000003312	-	99	58.852	ENSGACG00000011792	prpf3	59	58.612	Gasterosteus_aculeatus
ENSCING00000003312	-	99	58.095	ENSGAGG00000013765	PRPF3	76	57.110	Gopherus_agassizii
ENSCING00000003312	-	79	58.859	ENSGGOG00000013174	PRPF3	57	59.459	Gorilla_gorilla
ENSCING00000003312	-	99	59.091	ENSHBUG00000003493	prpf3	60	59.091	Haplochromis_burtoni
ENSCING00000003312	-	99	41.866	ENSHGLG00000016033	-	60	42.584	Heterocephalus_glaber_female
ENSCING00000003312	-	99	58.711	ENSHGLG00000016569	PRPF3	61	59.189	Heterocephalus_glaber_female
ENSCING00000003312	-	99	58.711	ENSHGLG00100007590	PRPF3	61	59.189	Heterocephalus_glaber_male
ENSCING00000003312	-	99	41.148	ENSHGLG00100008951	-	61	42.105	Heterocephalus_glaber_male
ENSCING00000003312	-	99	57.831	ENSHCOG00000014058	prpf3	59	58.072	Hippocampus_comes
ENSCING00000003312	-	100	58.711	ENSIPUG00000000902	PRPF3	62	57.746	Ictalurus_punctatus
ENSCING00000003312	-	99	58.711	ENSSTOG00000001889	PRPF3	61	59.189	Ictidomys_tridecemlineatus
ENSCING00000003312	-	99	58.010	ENSKMAG00000001390	prpf3	65	58.010	Kryptolebias_marmoratus
ENSCING00000003312	-	99	59.375	ENSLBEG00000026310	prpf3	66	59.375	Labrus_bergylta
ENSCING00000003312	-	90	52.507	ENSLACG00000010541	PRPF3	59	53.034	Latimeria_chalumnae
ENSCING00000003312	-	99	58.711	ENSLAFG00000004713	PRPF3	61	59.189	Loxodonta_africana
ENSCING00000003312	-	99	58.711	ENSMFAG00000039791	PRPF3	61	59.189	Macaca_fascicularis
ENSCING00000003312	-	86	60.112	ENSMMUG00000016301	PRPF3	56	60.112	Macaca_mulatta
ENSCING00000003312	-	99	58.711	ENSMNEG00000038161	PRPF3	61	59.189	Macaca_nemestrina
ENSCING00000003312	-	87	41.240	ENSMLEG00000041065	-	55	40.431	Mandrillus_leucophaeus
ENSCING00000003312	-	79	58.859	ENSMLEG00000040609	PRPF3	57	59.459	Mandrillus_leucophaeus
ENSCING00000003312	-	99	59.569	ENSMAMG00000014968	prpf3	65	59.524	Mastacembelus_armatus
ENSCING00000003312	-	99	60.584	ENSMZEG00005015970	prpf3	66	60.584	Maylandia_zebra
ENSCING00000003312	-	99	58.810	ENSMGAG00000000707	PRPF3	61	59.524	Meleagris_gallopavo
ENSCING00000003312	-	99	58.950	ENSMAUG00000017112	Prpf3	61	59.189	Mesocricetus_auratus
ENSCING00000003312	-	99	58.950	ENSMICG00000015386	PRPF3	76	59.427	Microcebus_murinus
ENSCING00000003312	-	99	58.711	ENSMOCG00000000242	Prpf3	61	59.189	Microtus_ochrogaster
ENSCING00000003312	-	99	54.126	ENSMMOG00000016131	prpf3	59	54.126	Mola_mola
ENSCING00000003312	-	99	58.950	ENSMODG00000018774	PRPF3	61	59.905	Monodelphis_domestica
ENSCING00000003312	-	99	61.017	ENSMALG00000007257	prpf3	59	61.017	Monopterus_albus
ENSCING00000003312	-	99	58.711	MGP_CAROLIEiJ_G0025354	Prpf3	61	59.189	Mus_caroli
ENSCING00000003312	-	99	58.711	ENSMUSG00000015748	Prpf3	61	59.189	Mus_musculus
ENSCING00000003312	-	99	58.711	MGP_PahariEiJ_G0026798	Prpf3	61	59.189	Mus_pahari
ENSCING00000003312	-	99	58.711	MGP_SPRETEiJ_G0026298	Prpf3	61	59.189	Mus_spretus
ENSCING00000003312	-	99	56.905	ENSMPUG00000005080	PRPF3	60	56.905	Mustela_putorius_furo
ENSCING00000003312	-	99	58.711	ENSMLUG00000004646	-	61	59.189	Myotis_lucifugus
ENSCING00000003312	-	99	58.711	ENSNGAG00000000910	Prpf3	61	59.189	Nannospalax_galili
ENSCING00000003312	-	99	58.852	ENSNBRG00000003462	prpf3	58	58.852	Neolamprologus_brichardi
ENSCING00000003312	-	86	60.112	ENSNLEG00000009841	PRPF3	57	60.112	Nomascus_leucogenys
ENSCING00000003312	-	79	49.249	ENSMEUG00000008733	PRPF3	52	50.450	Notamacropus_eugenii
ENSCING00000003312	-	99	58.711	ENSOPRG00000010139	PRPF3	61	59.189	Ochotona_princeps
ENSCING00000003312	-	99	58.711	ENSODEG00000011363	-	61	59.189	Octodon_degus
ENSCING00000003312	-	99	47.143	ENSODEG00000014412	-	62	47.381	Octodon_degus
ENSCING00000003312	-	99	59.615	ENSONIG00000006394	prpf3	59	59.615	Oreochromis_niloticus
ENSCING00000003312	-	99	53.081	ENSOANG00000015441	PRPF3	60	53.081	Ornithorhynchus_anatinus
ENSCING00000003312	-	99	58.711	ENSOCUG00000011760	PRPF3	61	59.189	Oryctolagus_cuniculus
ENSCING00000003312	-	99	58.852	ENSORLG00000010330	prpf3	60	58.852	Oryzias_latipes
ENSCING00000003312	-	99	58.852	ENSORLG00020009054	prpf3	60	58.852	Oryzias_latipes_hni
ENSCING00000003312	-	99	59.091	ENSORLG00015015016	prpf3	60	59.091	Oryzias_latipes_hsok
ENSCING00000003312	-	99	58.273	ENSOMEG00000000940	prpf3	65	58.273	Oryzias_melastigma
ENSCING00000003312	-	99	54.524	ENSOGAG00000005352	PRPF3	61	55.000	Otolemur_garnettii
ENSCING00000003312	-	99	58.711	ENSOARG00000020798	PRPF3	61	59.189	Ovis_aries
ENSCING00000003312	-	99	47.017	ENSPPAG00000043769	-	62	46.539	Pan_paniscus
ENSCING00000003312	-	99	58.711	ENSPPAG00000030983	PRPF3	61	59.189	Pan_paniscus
ENSCING00000003312	-	99	58.711	ENSPPRG00000000731	PRPF3	61	59.189	Panthera_pardus
ENSCING00000003312	-	99	58.711	ENSPTIG00000005516	PRPF3	61	59.189	Panthera_tigris_altaica
ENSCING00000003312	-	99	58.711	ENSPTRG00000001254	PRPF3	61	59.189	Pan_troglodytes
ENSCING00000003312	-	99	45.823	ENSPTRG00000047819	-	62	45.346	Pan_troglodytes
ENSCING00000003312	-	99	58.711	ENSPANG00000000499	PRPF3	61	59.189	Papio_anubis
ENSCING00000003312	-	100	59.242	ENSPKIG00000010501	prpf3	66	58.993	Paramormyrops_kingsleyae
ENSCING00000003312	-	99	58.473	ENSPSIG00000014877	PRPF3	61	58.473	Pelodiscus_sinensis
ENSCING00000003312	-	99	58.596	ENSPMGG00000007776	prpf3	64	58.596	Periophthalmus_magnuspinnatus
ENSCING00000003312	-	99	58.711	ENSPEMG00000011672	Prpf3	61	59.189	Peromyscus_maniculatus_bairdii
ENSCING00000003312	-	99	60.520	ENSPMAG00000005588	prpf3	93	60.520	Petromyzon_marinus
ENSCING00000003312	-	99	58.950	ENSPCIG00000008795	PRPF3	61	59.905	Phascolarctos_cinereus
ENSCING00000003312	-	99	59.472	ENSPFOG00000013638	prpf3	59	59.712	Poecilia_formosa
ENSCING00000003312	-	99	59.615	ENSPLAG00000018103	prpf3	60	59.856	Poecilia_latipinna
ENSCING00000003312	-	99	59.615	ENSPMEG00000023546	prpf3	60	59.856	Poecilia_mexicana
ENSCING00000003312	-	99	59.615	ENSPREG00000017216	prpf3	60	59.856	Poecilia_reticulata
ENSCING00000003312	-	63	53.462	ENSPPYG00000018646	-	50	53.462	Pongo_abelii
ENSCING00000003312	-	90	57.937	ENSPPYG00000000900	PRPF3	58	58.466	Pongo_abelii
ENSCING00000003312	-	99	58.711	ENSPCAG00000014908	PRPF3	61	59.189	Procavia_capensis
ENSCING00000003312	-	99	58.950	ENSPCOG00000013828	PRPF3	61	59.427	Propithecus_coquereli
ENSCING00000003312	-	99	58.234	ENSPVAG00000013472	PRPF3	61	58.711	Pteropus_vampyrus
ENSCING00000003312	-	99	58.852	ENSPNYG00000004279	prpf3	60	58.852	Pundamilia_nyererei
ENSCING00000003312	-	100	58.670	ENSPNAG00000001799	prpf3	66	58.670	Pygocentrus_nattereri
ENSCING00000003312	-	99	58.473	ENSRNOG00000025629	Prpf3	61	58.950	Rattus_norvegicus
ENSCING00000003312	-	70	52.713	ENSRBIG00000028854	PRPF3	51	54.264	Rhinopithecus_bieti
ENSCING00000003312	-	99	58.711	ENSRROG00000027464	PRPF3	61	59.189	Rhinopithecus_roxellana
ENSCING00000003312	-	99	51.790	ENSSBOG00000033104	PRPF3	58	52.267	Saimiri_boliviensis_boliviensis
ENSCING00000003312	-	99	58.711	ENSSHAG00000009548	PRPF3	61	59.666	Sarcophilus_harrisii
ENSCING00000003312	-	100	59.286	ENSSFOG00015022014	prpf3	66	59.286	Scleropages_formosus
ENSCING00000003312	-	99	58.852	ENSSMAG00000015739	prpf3	58	58.852	Scophthalmus_maximus
ENSCING00000003312	-	99	56.553	ENSSDUG00000006840	prpf3	58	56.763	Seriola_dumerili
ENSCING00000003312	-	99	59.091	ENSSLDG00000015423	prpf3	58	59.091	Seriola_lalandi_dorsalis
ENSCING00000003312	-	99	58.711	ENSSARG00000011064	PRPF3	61	59.189	Sorex_araneus
ENSCING00000003312	-	99	58.531	ENSSPUG00000000809	PRPF3	60	58.531	Sphenodon_punctatus
ENSCING00000003312	-	99	60.000	ENSSPAG00000018721	prpf3	65	60.000	Stegastes_partitus
ENSCING00000003312	-	99	58.711	ENSSSCG00000030119	PRPF3	76	59.189	Sus_scrofa
ENSCING00000003312	-	99	51.074	ENSTGUG00000004552	PRPF3	60	51.551	Taeniopygia_guttata
ENSCING00000003312	-	99	60.680	ENSTRUG00000014923	prpf3	61	60.680	Takifugu_rubripes
ENSCING00000003312	-	99	58.824	ENSTNIG00000008058	prpf3	60	58.824	Tetraodon_nigroviridis
ENSCING00000003312	-	99	54.458	ENSTBEG00000014072	PRPF3	65	55.635	Tupaia_belangeri
ENSCING00000003312	-	99	51.790	ENSTTRG00000010616	PRPF3	61	52.267	Tursiops_truncatus
ENSCING00000003312	-	99	58.711	ENSUAMG00000009345	PRPF3	76	59.189	Ursus_americanus
ENSCING00000003312	-	99	58.711	ENSUMAG00000003720	PRPF3	61	59.189	Ursus_maritimus
ENSCING00000003312	-	99	58.711	ENSVPAG00000005425	PRPF3	61	59.189	Vicugna_pacos
ENSCING00000003312	-	99	58.711	ENSVVUG00000007933	PRPF3	66	59.189	Vulpes_vulpes
ENSCING00000003312	-	99	59.102	ENSXETG00000018654	prpf3	61	59.102	Xenopus_tropicalis
ENSCING00000003312	-	99	60.437	ENSXMAG00000016347	prpf3	65	60.341	Xiphophorus_maculatus