EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000003314 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: GTP-binding protein 1-like
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 9245 bases
Position: chrHT000119.1:237803-247047
Accession: 100184487
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000006818	GTP_EFTU	PF00009.27	1.5e-22	1	1
ENSCINP00000006818	GTP_EFTU_D2	PF03144.25	1.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000006818	-	2458	XM_002130758	ENSCINP00000006818	576 (aa)	XP_002130794	F6SPK3

Gene Model

Click here to download ENSCING00000003314's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000003314's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000003314	-	89	71.735	ENSG00000100226	GTPBP1	99	64.000	Homo_sapiens
ENSCING00000003314	-	89	71.930	ENSAPOG00000006803	gtpbp1l	78	71.930	Acanthochromis_polyacanthus
ENSCING00000003314	-	93	68.909	ENSAPOG00000012168	gtpbp1	77	72.125	Acanthochromis_polyacanthus
ENSCING00000003314	-	89	71.735	ENSAMEG00000010713	GTPBP1	76	71.735	Ailuropoda_melanoleuca
ENSCING00000003314	-	94	68.946	ENSACIG00000006450	gtpbp1	79	71.961	Amphilophus_citrinellus
ENSCING00000003314	-	89	66.145	ENSACIG00000018369	gtpbp1l	78	66.211	Amphilophus_citrinellus
ENSCING00000003314	-	93	68.545	ENSAOCG00000018070	gtpbp1	77	71.735	Amphiprion_ocellaris
ENSCING00000003314	-	89	71.930	ENSAOCG00000017840	gtpbp1l	81	71.930	Amphiprion_ocellaris
ENSCING00000003314	-	93	68.545	ENSAPEG00000008015	gtpbp1	77	71.735	Amphiprion_percula
ENSCING00000003314	-	89	72.125	ENSAPEG00000008046	gtpbp1l	81	71.930	Amphiprion_percula
ENSCING00000003314	-	93	68.841	ENSATEG00000024804	gtpbp1	77	72.125	Anabas_testudineus
ENSCING00000003314	-	94	69.501	ENSATEG00000002110	gtpbp1l	82	71.540	Anabas_testudineus
ENSCING00000003314	-	89	71.820	ENSAPLG00000014138	GTPBP1	83	71.820	Anas_platyrhynchos
ENSCING00000003314	-	89	71.345	ENSACAG00000008070	GTPBP1	74	71.345	Anolis_carolinensis
ENSCING00000003314	-	89	71.735	ENSANAG00000037524	GTPBP1	78	71.735	Aotus_nancymaae
ENSCING00000003314	-	93	69.470	ENSACLG00000009588	gtpbp1l	78	72.266	Astatotilapia_calliptera
ENSCING00000003314	-	93	68.659	ENSACLG00000003178	gtpbp1	77	71.930	Astatotilapia_calliptera
ENSCING00000003314	-	89	72.125	ENSAMXG00000014812	gtpbp1	79	72.125	Astyanax_mexicanus
ENSCING00000003314	-	90	71.512	ENSAMXG00000013159	gtpbp1l	80	71.820	Astyanax_mexicanus
ENSCING00000003314	-	89	71.735	ENSBTAG00000010324	GTPBP1	85	71.680	Bos_taurus
ENSCING00000003314	-	92	52.523	WBGene00000480	cgp-1	83	54.386	Caenorhabditis_elegans
ENSCING00000003314	-	89	71.735	ENSCJAG00000011652	GTPBP1	77	71.735	Callithrix_jacchus
ENSCING00000003314	-	89	71.735	ENSCAFG00000001377	GTPBP1	77	71.735	Canis_familiaris
ENSCING00000003314	-	89	71.735	ENSCAFG00020002751	GTPBP1	77	71.735	Canis_lupus_dingo
ENSCING00000003314	-	89	71.735	ENSCHIG00000015505	GTPBP1	77	71.735	Capra_hircus
ENSCING00000003314	-	89	71.735	ENSTSYG00000008856	GTPBP1	76	71.735	Carlito_syrichta
ENSCING00000003314	-	88	71.739	ENSCAPG00000007480	GTPBP1	79	71.765	Cavia_aperea
ENSCING00000003314	-	93	67.442	ENSCPOG00000007667	GTPBP1	77	71.735	Cavia_porcellus
ENSCING00000003314	-	89	71.735	ENSCCAG00000033843	GTPBP1	77	71.735	Cebus_capucinus
ENSCING00000003314	-	89	71.735	ENSCATG00000037701	GTPBP1	77	71.735	Cercocebus_atys
ENSCING00000003314	-	93	67.442	ENSCLAG00000016782	GTPBP1	77	71.735	Chinchilla_lanigera
ENSCING00000003314	-	89	71.735	ENSCSAG00000006496	GTPBP1	77	71.735	Chlorocebus_sabaeus
ENSCING00000003314	-	95	67.391	ENSCPBG00000022999	GTPBP1	82	71.316	Chrysemys_picta_bellii
ENSCING00000003314	-	88	88.431	ENSCSAVG00000008731	-	99	88.431	Ciona_savignyi
ENSCING00000003314	-	89	71.735	ENSCANG00000037389	GTPBP1	77	71.735	Colobus_angolensis_palliatus
ENSCING00000003314	-	89	71.735	ENSCGRG00001016791	Gtpbp1	77	71.735	Cricetulus_griseus_chok1gshd
ENSCING00000003314	-	89	71.735	ENSCGRG00000004520	Gtpbp1	82	71.735	Cricetulus_griseus_crigri
ENSCING00000003314	-	93	68.659	ENSCSEG00000013001	gtpbp1	78	71.930	Cynoglossus_semilaevis
ENSCING00000003314	-	92	69.868	ENSCSEG00000001459	gtpbp1l	83	71.680	Cynoglossus_semilaevis
ENSCING00000003314	-	89	72.266	ENSCVAG00000011475	gtpbp1	77	72.266	Cyprinodon_variegatus
ENSCING00000003314	-	93	68.613	ENSCVAG00000011819	gtpbp1l	80	71.037	Cyprinodon_variegatus
ENSCING00000003314	-	89	72.461	ENSDARG00000053467	gtpbp1	78	72.461	Danio_rerio
ENSCING00000003314	-	94	68.966	ENSDARG00000042900	gtpbp1l	80	72.093	Danio_rerio
ENSCING00000003314	-	89	71.735	ENSDNOG00000010901	GTPBP1	77	71.735	Dasypus_novemcinctus
ENSCING00000003314	-	89	71.735	ENSDORG00000015795	Gtpbp1	77	71.735	Dipodomys_ordii
ENSCING00000003314	-	89	64.397	FBgn0027836	Dgp-1	77	64.397	Drosophila_melanogaster
ENSCING00000003314	-	72	66.586	ENSETEG00000008972	GTPBP1	71	66.586	Echinops_telfairi
ENSCING00000003314	-	93	69.444	ENSEBUG00000006404	gtpbp1	85	74.082	Eptatretus_burgeri
ENSCING00000003314	-	89	71.735	ENSEASG00005018753	GTPBP1	77	71.735	Equus_asinus_asinus
ENSCING00000003314	-	89	71.765	ENSECAG00000018027	GTPBP1	82	71.765	Equus_caballus
ENSCING00000003314	-	81	73.932	ENSEEUG00000002454	GTPBP1	70	73.932	Erinaceus_europaeus
ENSCING00000003314	-	73	61.798	ENSELUG00000019995	-	66	61.798	Esox_lucius
ENSCING00000003314	-	89	72.125	ENSELUG00000004553	gtpbp1	80	69.888	Esox_lucius
ENSCING00000003314	-	89	71.735	ENSFCAG00000010897	GTPBP1	77	71.735	Felis_catus
ENSCING00000003314	-	88	71.906	ENSFALG00000012474	GTPBP1	83	71.906	Ficedula_albicollis
ENSCING00000003314	-	89	71.765	ENSFDAG00000000554	GTPBP1	80	71.765	Fukomys_damarensis
ENSCING00000003314	-	89	72.656	ENSFHEG00000014632	gtpbp1	84	69.960	Fundulus_heteroclitus
ENSCING00000003314	-	66	73.171	ENSFHEG00000012700	gtpbp1l	65	79.412	Fundulus_heteroclitus
ENSCING00000003314	-	52	71.572	ENSGMOG00000008454	-	87	71.572	Gadus_morhua
ENSCING00000003314	-	89	71.930	ENSGALG00000030783	GTPBP1	77	71.930	Gallus_gallus
ENSCING00000003314	-	93	69.202	ENSGAFG00000011374	gtpbp1l	81	71.906	Gambusia_affinis
ENSCING00000003314	-	89	71.875	ENSGAFG00000018964	gtpbp1	77	71.875	Gambusia_affinis
ENSCING00000003314	-	93	67.812	ENSGACG00000012617	gtpbp1	76	71.316	Gasterosteus_aculeatus
ENSCING00000003314	-	69	75.421	ENSGAGG00000019929	GTPBP1	71	75.421	Gopherus_agassizii
ENSCING00000003314	-	52	76.094	ENSGGOG00000038424	-	76	76.094	Gorilla_gorilla
ENSCING00000003314	-	93	69.287	ENSHBUG00000008926	-	81	72.070	Haplochromis_burtoni
ENSCING00000003314	-	93	68.659	ENSHBUG00000007773	gtpbp1	77	71.930	Haplochromis_burtoni
ENSCING00000003314	-	89	71.930	ENSHGLG00000010884	GTPBP1	77	71.930	Heterocephalus_glaber_female
ENSCING00000003314	-	93	68.190	ENSHGLG00100006950	GTPBP1	78	71.850	Heterocephalus_glaber_male
ENSCING00000003314	-	89	71.345	ENSHCOG00000005409	gtpbp1	78	71.345	Hippocampus_comes
ENSCING00000003314	-	94	68.670	ENSHCOG00000009605	gtpbp1l	87	71.850	Hippocampus_comes
ENSCING00000003314	-	93	69.061	ENSIPUG00000013224	gtpbp1	88	69.245	Ictalurus_punctatus
ENSCING00000003314	-	89	71.765	ENSSTOG00000010766	GTPBP1	81	71.765	Ictidomys_tridecemlineatus
ENSCING00000003314	-	89	71.735	ENSJJAG00000011437	Gtpbp1	77	71.735	Jaculus_jaculus
ENSCING00000003314	-	89	71.930	ENSKMAG00000011667	gtpbp1l	77	71.930	Kryptolebias_marmoratus
ENSCING00000003314	-	93	68.670	ENSKMAG00000000729	gtpbp1	77	71.875	Kryptolebias_marmoratus
ENSCING00000003314	-	99	65.232	ENSLBEG00000017413	gtpbp1	76	71.709	Labrus_bergylta
ENSCING00000003314	-	90	72.254	ENSLBEG00000012322	gtpbp1l	85	72.008	Labrus_bergylta
ENSCING00000003314	-	90	73.025	ENSLOCG00000011287	gtpbp1l	77	73.489	Lepisosteus_oculatus
ENSCING00000003314	-	89	62.500	ENSLAFG00000010667	GTPBP1	84	62.500	Loxodonta_africana
ENSCING00000003314	-	89	71.735	ENSMFAG00000037252	GTPBP1	77	71.735	Macaca_fascicularis
ENSCING00000003314	-	89	71.735	ENSMMUG00000007277	GTPBP1	77	71.735	Macaca_mulatta
ENSCING00000003314	-	89	71.735	ENSMNEG00000035572	GTPBP1	77	71.735	Macaca_nemestrina
ENSCING00000003314	-	89	71.735	ENSMLEG00000031750	GTPBP1	77	71.735	Mandrillus_leucophaeus
ENSCING00000003314	-	93	69.708	ENSMAMG00000004504	gtpbp1l	84	69.343	Mastacembelus_armatus
ENSCING00000003314	-	93	67.818	ENSMAMG00000023709	gtpbp1	77	71.540	Mastacembelus_armatus
ENSCING00000003314	-	93	68.659	ENSMZEG00005012317	gtpbp1	77	71.930	Maylandia_zebra
ENSCING00000003314	-	93	69.470	ENSMZEG00005014218	gtpbp1l	78	72.266	Maylandia_zebra
ENSCING00000003314	-	89	69.804	ENSMGAG00000012411	GTPBP1	84	69.804	Meleagris_gallopavo
ENSCING00000003314	-	89	71.735	ENSMICG00000034218	GTPBP1	77	71.735	Microcebus_murinus
ENSCING00000003314	-	89	71.735	ENSMOCG00000022043	Gtpbp1	77	71.735	Microtus_ochrogaster
ENSCING00000003314	-	93	69.343	ENSMMOG00000011119	gtpbp1l	78	72.320	Mola_mola
ENSCING00000003314	-	93	68.000	ENSMMOG00000005017	gtpbp1	81	71.569	Mola_mola
ENSCING00000003314	-	89	71.540	ENSMODG00000009613	GTPBP1	77	71.540	Monodelphis_domestica
ENSCING00000003314	-	93	69.343	ENSMALG00000014627	gtpbp1l	83	69.343	Monopterus_albus
ENSCING00000003314	-	93	69.118	ENSMALG00000019926	gtpbp1	77	72.102	Monopterus_albus
ENSCING00000003314	-	89	71.930	MGP_CAROLIEiJ_G0020023	Gtpbp1	76	71.930	Mus_caroli
ENSCING00000003314	-	89	71.930	ENSMUSG00000042535	Gtpbp1	95	62.963	Mus_musculus
ENSCING00000003314	-	89	71.930	MGP_PahariEiJ_G0020025	Gtpbp1	77	71.930	Mus_pahari
ENSCING00000003314	-	89	71.930	MGP_SPRETEiJ_G0020921	Gtpbp1	77	71.930	Mus_spretus
ENSCING00000003314	-	89	71.735	ENSMPUG00000013174	GTPBP1	77	71.735	Mustela_putorius_furo
ENSCING00000003314	-	93	67.263	ENSMLUG00000003767	GTPBP1	77	71.540	Myotis_lucifugus
ENSCING00000003314	-	89	71.930	ENSNGAG00000010065	Gtpbp1	77	71.930	Nannospalax_galili
ENSCING00000003314	-	93	68.659	ENSNBRG00000007080	gtpbp1	79	71.930	Neolamprologus_brichardi
ENSCING00000003314	-	93	69.048	ENSNBRG00000011770	gtpbp1l	80	72.016	Neolamprologus_brichardi
ENSCING00000003314	-	82	70.355	ENSNLEG00000015164	GTPBP1	70	70.355	Nomascus_leucogenys
ENSCING00000003314	-	89	66.275	ENSMEUG00000015144	GTPBP1	85	66.275	Notamacropus_eugenii
ENSCING00000003314	-	89	71.735	ENSOPRG00000014827	GTPBP1	77	71.735	Ochotona_princeps
ENSCING00000003314	-	93	67.621	ENSODEG00000012443	GTPBP1	77	71.735	Octodon_degus
ENSCING00000003314	-	93	68.659	ENSONIG00000002088	gtpbp1	77	71.930	Oreochromis_niloticus
ENSCING00000003314	-	93	69.287	ENSONIG00000016913	gtpbp1l	78	72.266	Oreochromis_niloticus
ENSCING00000003314	-	89	54.198	ENSOANG00000010579	GTPBP1	93	54.771	Ornithorhynchus_anatinus
ENSCING00000003314	-	93	68.315	ENSOCUG00000024468	GTPBP1	79	71.345	Oryctolagus_cuniculus
ENSCING00000003314	-	95	69.541	ENSORLG00000010742	gtpbp1	84	66.802	Oryzias_latipes
ENSCING00000003314	-	95	69.541	ENSORLG00020014602	gtpbp1	78	72.515	Oryzias_latipes_hni
ENSCING00000003314	-	95	69.541	ENSORLG00015004356	gtpbp1	77	72.515	Oryzias_latipes_hsok
ENSCING00000003314	-	93	69.891	ENSOMEG00000015651	gtpbp1l	87	69.104	Oryzias_melastigma
ENSCING00000003314	-	95	69.174	ENSOMEG00000013252	-	84	74.730	Oryzias_melastigma
ENSCING00000003314	-	89	70.955	ENSOGAG00000000514	GTPBP1	77	70.955	Otolemur_garnettii
ENSCING00000003314	-	89	71.262	ENSOARG00000015877	GTPBP1	77	71.540	Ovis_aries
ENSCING00000003314	-	92	69.794	ENSPPAG00000024682	GTPBP1	75	71.654	Pan_paniscus
ENSCING00000003314	-	89	71.735	ENSPPRG00000006069	GTPBP1	77	71.735	Panthera_pardus
ENSCING00000003314	-	89	71.765	ENSPTIG00000021742	GTPBP1	76	71.765	Panthera_tigris_altaica
ENSCING00000003314	-	89	71.735	ENSPTRG00000014376	GTPBP1	76	71.735	Pan_troglodytes
ENSCING00000003314	-	89	71.735	ENSPANG00000013808	GTPBP1	74	71.735	Papio_anubis
ENSCING00000003314	-	89	72.320	ENSPKIG00000005548	gtpbp1l	78	72.320	Paramormyrops_kingsleyae
ENSCING00000003314	-	89	71.345	ENSPSIG00000004300	GTPBP1	76	71.345	Pelodiscus_sinensis
ENSCING00000003314	-	89	71.567	ENSPMGG00000018952	gtpbp1l	81	71.820	Periophthalmus_magnuspinnatus
ENSCING00000003314	-	93	68.852	ENSPMGG00000022453	gtpbp1	77	71.930	Periophthalmus_magnuspinnatus
ENSCING00000003314	-	96	66.316	ENSPEMG00000022105	Gtpbp1	77	71.765	Peromyscus_maniculatus_bairdii
ENSCING00000003314	-	82	74.098	ENSPCIG00000015134	GTPBP1	76	74.098	Phascolarctos_cinereus
ENSCING00000003314	-	89	72.070	ENSPFOG00000011239	gtpbp1	77	72.070	Poecilia_formosa
ENSCING00000003314	-	93	69.691	ENSPFOG00000013922	gtpbp1l	79	72.179	Poecilia_formosa
ENSCING00000003314	-	80	75.325	ENSPLAG00000017284	gtpbp1	84	75.325	Poecilia_latipinna
ENSCING00000003314	-	93	69.691	ENSPLAG00000007618	-	87	69.444	Poecilia_latipinna
ENSCING00000003314	-	89	72.070	ENSPMEG00000019270	gtpbp1	80	72.070	Poecilia_mexicana
ENSCING00000003314	-	93	69.691	ENSPMEG00000018339	-	84	67.532	Poecilia_mexicana
ENSCING00000003314	-	89	72.070	ENSPREG00000000559	gtpbp1	77	72.070	Poecilia_reticulata
ENSCING00000003314	-	93	69.147	ENSPREG00000000165	gtpbp1l	81	71.680	Poecilia_reticulata
ENSCING00000003314	-	51	75.932	ENSPPYG00000012009	-	99	75.932	Pongo_abelii
ENSCING00000003314	-	89	71.735	ENSPCOG00000028734	GTPBP1	77	71.735	Propithecus_coquereli
ENSCING00000003314	-	93	67.442	ENSPVAG00000010149	GTPBP1	77	71.540	Pteropus_vampyrus
ENSCING00000003314	-	93	69.287	ENSPNYG00000015449	gtpbp1l	81	71.875	Pundamilia_nyererei
ENSCING00000003314	-	93	68.659	ENSPNYG00000012846	gtpbp1	79	71.930	Pundamilia_nyererei
ENSCING00000003314	-	89	72.320	ENSPNAG00000016079	gtpbp1	78	72.320	Pygocentrus_nattereri
ENSCING00000003314	-	89	71.930	ENSRNOG00000014634	Gtpbp1	77	71.930	Rattus_norvegicus
ENSCING00000003314	-	97	65.744	ENSRBIG00000031386	GTPBP1	76	71.735	Rhinopithecus_bieti
ENSCING00000003314	-	97	65.744	ENSRROG00000044733	GTPBP1	77	71.735	Rhinopithecus_roxellana
ENSCING00000003314	-	97	67.145	ENSSBOG00000029683	GTPBP1	85	67.145	Saimiri_boliviensis_boliviensis
ENSCING00000003314	-	85	72.188	ENSSHAG00000015800	GTPBP1	84	72.188	Sarcophilus_harrisii
ENSCING00000003314	-	94	69.455	ENSSFOG00015004705	gtpbp1	78	72.621	Scleropages_formosus
ENSCING00000003314	-	89	71.150	ENSSMAG00000021142	gtpbp1l	88	70.980	Scophthalmus_maximus
ENSCING00000003314	-	89	71.569	ENSSMAG00000011143	gtpbp1	83	71.569	Scophthalmus_maximus
ENSCING00000003314	-	89	71.930	ENSSDUG00000000925	gtpbp1	77	71.930	Seriola_dumerili
ENSCING00000003314	-	89	72.461	ENSSDUG00000012562	gtpbp1l	78	72.461	Seriola_dumerili
ENSCING00000003314	-	89	71.930	ENSSLDG00000009033	gtpbp1	78	71.930	Seriola_lalandi_dorsalis
ENSCING00000003314	-	89	72.461	ENSSLDG00000020573	gtpbp1l	80	72.461	Seriola_lalandi_dorsalis
ENSCING00000003314	-	89	71.150	ENSSPUG00000011073	GTPBP1	75	71.150	Sphenodon_punctatus
ENSCING00000003314	-	89	72.320	ENSSPAG00000006728	-	80	72.387	Stegastes_partitus
ENSCING00000003314	-	93	68.659	ENSSPAG00000000971	gtpbp1	77	71.930	Stegastes_partitus
ENSCING00000003314	-	89	71.735	ENSSSCG00000000095	GTPBP1	83	74.514	Sus_scrofa
ENSCING00000003314	-	89	71.540	ENSTGUG00000010342	GTPBP1	77	71.540	Taeniopygia_guttata
ENSCING00000003314	-	89	71.345	ENSTRUG00000011622	gtpbp1l	79	71.345	Takifugu_rubripes
ENSCING00000003314	-	93	68.909	ENSTRUG00000007112	gtpbp1	75	72.320	Takifugu_rubripes
ENSCING00000003314	-	93	68.066	ENSTNIG00000018814	gtpbp1l	79	70.955	Tetraodon_nigroviridis
ENSCING00000003314	-	89	72.233	ENSTNIG00000012630	gtpbp1	77	72.233	Tetraodon_nigroviridis
ENSCING00000003314	-	89	71.735	ENSTTRG00000005629	GTPBP1	77	71.735	Tursiops_truncatus
ENSCING00000003314	-	83	71.698	ENSUAMG00000011635	-	100	71.698	Ursus_americanus
ENSCING00000003314	-	89	71.765	ENSUMAG00000014480	GTPBP1	82	71.765	Ursus_maritimus
ENSCING00000003314	-	89	71.735	ENSVVUG00000022607	GTPBP1	77	71.735	Vulpes_vulpes
ENSCING00000003314	-	89	70.955	ENSXETG00000006894	gtpbp1	79	70.955	Xenopus_tropicalis
ENSCING00000003314	-	93	69.517	ENSXCOG00000015928	gtpbp1l	82	72.244	Xiphophorus_couchianus
ENSCING00000003314	-	89	72.070	ENSXMAG00000014069	gtpbp1	79	72.070	Xiphophorus_maculatus
ENSCING00000003314	-	93	69.328	ENSXMAG00000010002	gtpbp1l	89	72.244	Xiphophorus_maculatus