EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000003319 (Gene tree)
Gene ID: 778861
Gene Symbol: zf(matrin)-2
Alias: -
Full Name: zinc finger protein
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 2536 bases
Position: chr8:2851107-2853642
Accession: 778861
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000006811	zf-met	PF12874.7	6.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000006811	-	1172	-	ENSCINP00000006811	349 (aa)	-	Q1RPZ2

Gene Model

Click here to download ENSCING00000003319's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000003319's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000003319	zf(matrin)-2	63	84.091	ENSG00000104897	SF3A2	100	87.407	Homo_sapiens
ENSCING00000003319	zf(matrin)-2	87	69.307	ENSACIG00000018153	sf3a2	81	80.753	Amphilophus_citrinellus
ENSCING00000003319	zf(matrin)-2	64	79.832	ENSAOCG00000015960	sf3a2	81	79.498	Amphiprion_ocellaris
ENSCING00000003319	zf(matrin)-2	64	79.832	ENSAPEG00000012336	sf3a2	81	79.498	Amphiprion_percula
ENSCING00000003319	zf(matrin)-2	64	79.832	ENSATEG00000015449	sf3a2	81	79.498	Anabas_testudineus
ENSCING00000003319	zf(matrin)-2	53	85.405	ENSANAG00000034031	-	96	79.902	Aotus_nancymaae
ENSCING00000003319	zf(matrin)-2	87	70.530	ENSACLG00000002356	sf3a2	81	80.335	Astatotilapia_calliptera
ENSCING00000003319	zf(matrin)-2	64	79.832	ENSAMXG00000032428	sf3a2	79	79.498	Astyanax_mexicanus
ENSCING00000003319	zf(matrin)-2	62	78.605	WBGene00008683	repo-1	96	78.605	Caenorhabditis_elegans
ENSCING00000003319	zf(matrin)-2	52	86.264	ENSCAPG00000003402	-	90	86.264	Cavia_aperea
ENSCING00000003319	zf(matrin)-2	63	84.091	ENSCCAG00000009812	SF3A2	87	85.946	Cebus_capucinus
ENSCING00000003319	zf(matrin)-2	63	85.000	ENSCPBG00000018569	SF3A2	70	85.000	Chrysemys_picta_bellii
ENSCING00000003319	zf(matrin)-2	63	84.091	ENSCGRG00000011089	Sf3a2	94	86.264	Cricetulus_griseus_crigri
ENSCING00000003319	zf(matrin)-2	70	75.862	ENSCSEG00000014308	sf3a2	85	79.339	Cynoglossus_semilaevis
ENSCING00000003319	zf(matrin)-2	62	86.512	ENSCVAG00000021349	sf3a2	73	86.512	Cyprinodon_variegatus
ENSCING00000003319	zf(matrin)-2	62	86.512	ENSDARG00000021107	sf3a2	77	86.512	Danio_rerio
ENSCING00000003319	zf(matrin)-2	62	83.333	FBgn0036314	Sf3a2	84	82.063	Drosophila_melanogaster
ENSCING00000003319	zf(matrin)-2	63	83.636	ENSFCAG00000030476	SF3A2	50	83.945	Felis_catus
ENSCING00000003319	zf(matrin)-2	53	86.559	ENSFALG00000013785	-	80	64.821	Ficedula_albicollis
ENSCING00000003319	zf(matrin)-2	52	86.264	ENSFDAG00000020911	-	93	86.264	Fukomys_damarensis
ENSCING00000003319	zf(matrin)-2	64	80.672	ENSFHEG00000002392	sf3a2	82	80.083	Fundulus_heteroclitus
ENSCING00000003319	zf(matrin)-2	77	72.325	ENSGMOG00000012186	sf3a2	79	79.498	Gadus_morhua
ENSCING00000003319	zf(matrin)-2	62	86.047	ENSGALG00000021679	SF3A2	70	85.000	Gallus_gallus
ENSCING00000003319	zf(matrin)-2	80	66.786	ENSGAFG00000008478	sf3a2	81	80.672	Gambusia_affinis
ENSCING00000003319	zf(matrin)-2	64	80.252	ENSGACG00000015255	sf3a2	82	79.916	Gasterosteus_aculeatus
ENSCING00000003319	zf(matrin)-2	50	84.483	ENSGAGG00000008500	SF3A2	64	84.884	Gopherus_agassizii
ENSCING00000003319	zf(matrin)-2	87	70.530	ENSHBUG00000021796	sf3a2	81	80.335	Haplochromis_burtoni
ENSCING00000003319	zf(matrin)-2	63	84.091	ENSHGLG00000015102	SF3A2	88	86.339	Heterocephalus_glaber_female
ENSCING00000003319	zf(matrin)-2	63	84.091	ENSHGLG00100000418	SF3A2	88	86.339	Heterocephalus_glaber_male
ENSCING00000003319	zf(matrin)-2	65	80.083	ENSHCOG00000001223	sf3a2	83	80.083	Hippocampus_comes
ENSCING00000003319	zf(matrin)-2	64	79.412	ENSIPUG00000019071	sf3a2	80	79.079	Ictalurus_punctatus
ENSCING00000003319	zf(matrin)-2	63	84.091	ENSSTOG00000007495	SF3A2	90	79.781	Ictidomys_tridecemlineatus
ENSCING00000003319	zf(matrin)-2	63	84.091	ENSJJAG00000010635	Sf3a2	96	85.405	Jaculus_jaculus
ENSCING00000003319	zf(matrin)-2	62	86.977	ENSKMAG00000006295	sf3a2	73	86.977	Kryptolebias_marmoratus
ENSCING00000003319	zf(matrin)-2	83	68.966	ENSLBEG00000000677	sf3a2	84	78.226	Labrus_bergylta
ENSCING00000003319	zf(matrin)-2	62	85.581	ENSLACG00000008744	SF3A2	72	83.556	Latimeria_chalumnae
ENSCING00000003319	zf(matrin)-2	63	85.000	ENSLOCG00000005835	sf3a2	77	79.498	Lepisosteus_oculatus
ENSCING00000003319	zf(matrin)-2	64	79.412	ENSMAMG00000009881	sf3a2	96	68.836	Mastacembelus_armatus
ENSCING00000003319	zf(matrin)-2	87	70.530	ENSMZEG00005025609	sf3a2	81	80.335	Maylandia_zebra
ENSCING00000003319	zf(matrin)-2	62	86.047	ENSMGAG00000001950	SF3A2	70	85.000	Meleagris_gallopavo
ENSCING00000003319	zf(matrin)-2	52	86.264	ENSMAUG00000005644	-	94	86.264	Mesocricetus_auratus
ENSCING00000003319	zf(matrin)-2	64	72.269	ENSMMOG00000010657	sf3a2	85	71.967	Mola_mola
ENSCING00000003319	zf(matrin)-2	64	80.252	ENSMALG00000020442	sf3a2	83	78.138	Monopterus_albus
ENSCING00000003319	zf(matrin)-2	63	84.091	MGP_CAROLIEiJ_G0015602	-	94	86.264	Mus_caroli
ENSCING00000003319	zf(matrin)-2	63	84.091	ENSMUSG00000020211	Sf3a2	94	86.264	Mus_musculus
ENSCING00000003319	zf(matrin)-2	63	84.091	MGP_PahariEiJ_G0031015	-	94	86.264	Mus_pahari
ENSCING00000003319	zf(matrin)-2	63	84.091	MGP_SPRETEiJ_G0016420	-	94	86.264	Mus_spretus
ENSCING00000003319	zf(matrin)-2	52	85.714	ENSNGAG00000023309	-	94	85.714	Nannospalax_galili
ENSCING00000003319	zf(matrin)-2	87	68.874	ENSNBRG00000019872	sf3a2	81	80.335	Neolamprologus_brichardi
ENSCING00000003319	zf(matrin)-2	54	84.492	ENSODEG00000013722	-	100	84.492	Octodon_degus
ENSCING00000003319	zf(matrin)-2	79	72.760	ENSONIG00000010198	sf3a2	81	80.753	Oreochromis_niloticus
ENSCING00000003319	zf(matrin)-2	59	84.466	ENSOANG00000013649	-	98	84.466	Ornithorhynchus_anatinus
ENSCING00000003319	zf(matrin)-2	71	78.313	ENSORLG00000015301	sf3a2	84	78.776	Oryzias_latipes
ENSCING00000003319	zf(matrin)-2	71	77.912	ENSORLG00020017235	sf3a2	84	78.776	Oryzias_latipes_hni
ENSCING00000003319	zf(matrin)-2	85	67.450	ENSORLG00015017116	sf3a2	84	78.776	Oryzias_latipes_hsok
ENSCING00000003319	zf(matrin)-2	87	67.213	ENSOMEG00000020860	sf3a2	84	78.776	Oryzias_melastigma
ENSCING00000003319	zf(matrin)-2	63	84.091	ENSOARG00000014357	SF3A2	53	84.404	Ovis_aries
ENSCING00000003319	zf(matrin)-2	79	68.662	ENSPKIG00000009487	sf3a2	76	79.916	Paramormyrops_kingsleyae
ENSCING00000003319	zf(matrin)-2	63	84.234	ENSPSIG00000010839	SF3A2	69	84.545	Pelodiscus_sinensis
ENSCING00000003319	zf(matrin)-2	62	85.581	ENSPMGG00000017249	sf3a2	82	83.491	Periophthalmus_magnuspinnatus
ENSCING00000003319	zf(matrin)-2	80	68.214	ENSPFOG00000015945	sf3a2	84	78.138	Poecilia_formosa
ENSCING00000003319	zf(matrin)-2	80	68.214	ENSPLAG00000010052	sf3a2	84	78.543	Poecilia_latipinna
ENSCING00000003319	zf(matrin)-2	80	68.214	ENSPMEG00000000184	sf3a2	84	78.138	Poecilia_mexicana
ENSCING00000003319	zf(matrin)-2	80	68.214	ENSPREG00000017808	sf3a2	84	78.543	Poecilia_reticulata
ENSCING00000003319	zf(matrin)-2	87	70.530	ENSPNYG00000006928	sf3a2	81	80.335	Pundamilia_nyererei
ENSCING00000003319	zf(matrin)-2	64	80.252	ENSPNAG00000027582	sf3a2	79	79.916	Pygocentrus_nattereri
ENSCING00000003319	zf(matrin)-2	62	85.116	ENSSHAG00000011677	-	89	84.091	Sarcophilus_harrisii
ENSCING00000003319	zf(matrin)-2	55	77.487	ENSSHAG00000011646	-	69	76.531	Sarcophilus_harrisii
ENSCING00000003319	zf(matrin)-2	63	85.909	ENSSFOG00015010920	sf3a2	71	78.629	Scleropages_formosus
ENSCING00000003319	zf(matrin)-2	85	68.814	ENSSMAG00000002629	sf3a2	85	78.049	Scophthalmus_maximus
ENSCING00000003319	zf(matrin)-2	85	69.153	ENSSDUG00000015810	sf3a2	93	65.273	Seriola_dumerili
ENSCING00000003319	zf(matrin)-2	85	69.492	ENSSLDG00000010874	sf3a2	93	65.273	Seriola_lalandi_dorsalis
ENSCING00000003319	zf(matrin)-2	64	79.832	ENSSPAG00000004960	sf3a2	81	79.498	Stegastes_partitus
ENSCING00000003319	zf(matrin)-2	59	86.341	ENSTGUG00000000305	SF3A2	100	86.341	Taeniopygia_guttata
ENSCING00000003319	zf(matrin)-2	64	80.252	ENSTRUG00000009045	sf3a2	78	83.556	Takifugu_rubripes
ENSCING00000003319	zf(matrin)-2	64	80.252	ENSTNIG00000015318	sf3a2	78	84.000	Tetraodon_nigroviridis
ENSCING00000003319	zf(matrin)-2	62	85.581	ENSXETG00000024943	sf3a2	53	84.862	Xenopus_tropicalis
ENSCING00000003319	zf(matrin)-2	62	86.977	ENSXCOG00000008222	sf3a2	83	79.835	Xiphophorus_couchianus
ENSCING00000003319	zf(matrin)-2	62	86.977	ENSXMAG00000029068	sf3a2	83	79.835	Xiphophorus_maculatus