EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCING00000003340 (Gene tree)
Gene ID
100182193
Gene Symbol
-
Alias
-
Full Name
ras-related protein Rab-5B-like
Gene Type
protein_coding
Species
Ciona_intestinalis
Status
putative
Strand
Minus strand
Length
5490 bases
Position
chrHT000103.1:357050-362539
Accession
100182193
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCINP00000006853MMR_HSR1PF01926.235.4e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCINT00000006853-740-ENSCINP00000006853217 (aa)XP_002122313F6S1S7
Gene Model
Click here to download ENSCING00000003340's gene model file
Pathways
Pathway IDPathway NameSource
cin04144EndocytosisKEGG
cin04145PhagosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000003340's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCING00000003340-9976.168ENSG00000108774RAB5C10089.516Homo_sapiens
ENSCING00000003340-8683.333ENSAPOG00000016864rab5c10074.545Acanthochromis_polyacanthus
ENSCING00000003340-9977.103ENSAMEG00000006003RAB5C9977.103Ailuropoda_melanoleuca
ENSCING00000003340-10074.545ENSACIG00000010896rab5c10075.000Amphilophus_citrinellus
ENSCING00000003340-8683.333ENSAOCG00000016614rab5c10074.545Amphiprion_ocellaris
ENSCING00000003340-8483.696ENSAPEG00000017868-10074.771Amphiprion_percula
ENSCING00000003340-9974.312ENSATEG00000001937rab5c10074.886Anabas_testudineus
ENSCING00000003340-9280.693ENSANAG00000025390RAB5C9980.693Aotus_nancymaae
ENSCING00000003340-9775.701ENSACLG00000008615-9775.814Astatotilapia_calliptera
ENSCING00000003340-10075.000ENSACLG00000002706rab5c10075.000Astatotilapia_calliptera
ENSCING00000003340-9576.190ENSAMXG00000037267-9976.190Astyanax_mexicanus
ENSCING00000003340-10074.661ENSAMXG00000043717rab5c10075.113Astyanax_mexicanus
ENSCING00000003340-9977.103ENSBTAG00000006982RAB5C9977.103Bos_taurus
ENSCING00000003340-8480.435WBGene00004268rab-58780.435Caenorhabditis_elegans
ENSCING00000003340-9977.103ENSCAFG00000015629RAB5C9977.103Canis_familiaris
ENSCING00000003340-9977.103ENSCAFG00020013537RAB5C9977.103Canis_lupus_dingo
ENSCING00000003340-9977.103ENSCHIG00000012960RAB5C9977.103Capra_hircus
ENSCING00000003340-9976.636ENSTSYG00000030531RAB5C9976.636Carlito_syrichta
ENSCING00000003340-9976.168ENSCCAG00000025940RAB5C9976.168Cebus_capucinus
ENSCING00000003340-9976.168ENSCATG00000040873RAB5C9976.168Cercocebus_atys
ENSCING00000003340-9976.168ENSCLAG00000016650RAB5C9976.168Chinchilla_lanigera
ENSCING00000003340-8284.270ENSCHOG00000009886RAB5C10084.270Choloepus_hoffmanni
ENSCING00000003340-9986.937ENSCSAVG00000000613-9990.123Ciona_savignyi
ENSCING00000003340-9975.701ENSCGRG00001014226Rab5c9975.701Cricetulus_griseus_chok1gshd
ENSCING00000003340-9975.701ENSCGRG00000007534Rab5c9975.701Cricetulus_griseus_crigri
ENSCING00000003340-9977.169ENSCSEG00000017024rab5c9977.169Cynoglossus_semilaevis
ENSCING00000003340-9975.229ENSCVAG00000009550rab5c9975.688Cyprinodon_variegatus
ENSCING00000003340-9976.636ENSDNOG00000038853RAB5C9976.636Dasypus_novemcinctus
ENSCING00000003340-9976.636ENSDORG00000006819Rab5c9976.636Dipodomys_ordii
ENSCING00000003340-9875.472FBgn0014010Rab59575.472Drosophila_melanogaster
ENSCING00000003340-9975.234ENSEBUG00000014794rab5c9975.234Eptatretus_burgeri
ENSCING00000003340-9975.926ENSEASG00005009281RAB5C10075.926Equus_asinus_asinus
ENSCING00000003340-9976.636ENSECAG00000025054RAB5C9976.636Equus_caballus
ENSCING00000003340-9977.103ENSEEUG00000002790RAB5C9977.103Erinaceus_europaeus
ENSCING00000003340-10074.091ENSELUG00000010439-10074.091Esox_lucius
ENSCING00000003340-9975.115ENSELUG00000018516rab5c9975.576Esox_lucius
ENSCING00000003340-9977.103ENSFCAG00000002148RAB5C9977.103Felis_catus
ENSCING00000003340-9976.168ENSFDAG00000021541RAB5C9976.168Fukomys_damarensis
ENSCING00000003340-10074.324ENSFHEG00000015268-10074.324Fundulus_heteroclitus
ENSCING00000003340-9974.771ENSFHEG00000012117rab5c9975.229Fundulus_heteroclitus
ENSCING00000003340-8683.333ENSGMOG00000015096rab5c9975.229Gadus_morhua
ENSCING00000003340-7981.977ENSGMOG00000001876-9981.977Gadus_morhua
ENSCING00000003340-10074.091ENSGAFG00000000884rab5c10074.545Gambusia_affinis
ENSCING00000003340-9277.941ENSGAFG00000003642-10073.991Gambusia_affinis
ENSCING00000003340-9975.576ENSGACG00000008659rab5c9975.576Gasterosteus_aculeatus
ENSCING00000003340-9976.168ENSGGOG00000005472RAB5C9976.168Gorilla_gorilla
ENSCING00000003340-10075.000ENSHBUG00000002014rab5c10075.000Haplochromis_burtoni
ENSCING00000003340-9775.701ENSHBUG00000006823-9775.814Haplochromis_burtoni
ENSCING00000003340-9877.209ENSHGLG00000012067RAB5C9977.209Heterocephalus_glaber_female
ENSCING00000003340-8682.888ENSHCOG00000004662rab5c9774.886Hippocampus_comes
ENSCING00000003340-9575.355ENSHCOG00000020238-9675.117Hippocampus_comes
ENSCING00000003340-9775.234ENSIPUG00000020082rab5c9975.234Ictalurus_punctatus
ENSCING00000003340-9976.168ENSSTOG00000006620RAB5C9976.168Ictidomys_tridecemlineatus
ENSCING00000003340-9976.636ENSJJAG00000021181Rab5c9976.636Jaculus_jaculus
ENSCING00000003340-10074.208ENSKMAG00000017417-10074.208Kryptolebias_marmoratus
ENSCING00000003340-9974.654ENSKMAG00000020038rab5c9976.147Kryptolebias_marmoratus
ENSCING00000003340-9774.299ENSLBEG00000010408-9674.766Labrus_bergylta
ENSCING00000003340-10075.000ENSLBEG00000004128rab5c10075.000Labrus_bergylta
ENSCING00000003340-9974.299ENSLOCG00000012566rab5c10074.299Lepisosteus_oculatus
ENSCING00000003340-9976.168ENSMFAG00000039627RAB5C9976.168Macaca_fascicularis
ENSCING00000003340-9976.168ENSMNEG00000000355RAB5C9976.168Macaca_nemestrina
ENSCING00000003340-10074.208ENSMAMG00000016207-10074.208Mastacembelus_armatus
ENSCING00000003340-9974.886ENSMAMG00000022322rab5c9976.256Mastacembelus_armatus
ENSCING00000003340-9775.701ENSMZEG00005021090-9775.814Maylandia_zebra
ENSCING00000003340-10075.000ENSMZEG00005022735rab5c10075.000Maylandia_zebra
ENSCING00000003340-9976.168ENSMAUG00000015005Rab5c9976.168Mesocricetus_auratus
ENSCING00000003340-9976.636ENSMICG00000041608RAB5C9976.636Microcebus_murinus
ENSCING00000003340-9976.168ENSMOCG00000018531-9976.168Microtus_ochrogaster
ENSCING00000003340-9976.712ENSMMOG00000020621rab5c9976.712Mola_mola
ENSCING00000003340-9973.853ENSMALG00000006052rab5c10074.222Monopterus_albus
ENSCING00000003340-9974.545ENSMALG00000022348-10074.545Monopterus_albus
ENSCING00000003340-9976.168MGP_CAROLIEiJ_G0017184Rab5c9976.168Mus_caroli
ENSCING00000003340-9976.168ENSMUSG00000019173Rab5c9976.168Mus_musculus
ENSCING00000003340-9976.168MGP_PahariEiJ_G0018314Rab5c9976.168Mus_pahari
ENSCING00000003340-9976.168MGP_SPRETEiJ_G0018027Rab5c9976.168Mus_spretus
ENSCING00000003340-9977.103ENSMPUG00000010554RAB5C9977.103Mustela_putorius_furo
ENSCING00000003340-9976.636ENSNGAG00000010286Rab5c9976.636Nannospalax_galili
ENSCING00000003340-9775.701ENSNBRG00000016922-9775.814Neolamprologus_brichardi
ENSCING00000003340-10075.000ENSNBRG00000018165rab5c10075.000Neolamprologus_brichardi
ENSCING00000003340-8280.899ENSOPRG00000008255RAB5C10080.899Ochotona_princeps
ENSCING00000003340-9976.636ENSODEG00000017920RAB5C9976.636Octodon_degus
ENSCING00000003340-10074.545ENSONIG00000001113rab5c10074.545Oreochromis_niloticus
ENSCING00000003340-9973.853ENSORLG00000003882rab5c10074.429Oryzias_latipes
ENSCING00000003340-9974.429ENSORLG00020008388rab5c10074.429Oryzias_latipes_hni
ENSCING00000003340-9973.853ENSORLG00015021900rab5c10074.429Oryzias_latipes_hsok
ENSCING00000003340-9973.853ENSOMEG00000023078rab5c10074.429Oryzias_melastigma
ENSCING00000003340-9976.168ENSOGAG00000009456RAB5C9976.168Otolemur_garnettii
ENSCING00000003340-9977.103ENSOARG00000018768RAB5C9977.103Ovis_aries
ENSCING00000003340-9976.168ENSPPAG00000037206RAB5C9976.168Pan_paniscus
ENSCING00000003340-9977.103ENSPPRG00000005745RAB5C9977.103Panthera_pardus
ENSCING00000003340-9977.103ENSPTIG00000008177RAB5C9977.103Panthera_tigris_altaica
ENSCING00000003340-9976.168ENSPTRG00000009194RAB5C9976.168Pan_troglodytes
ENSCING00000003340-9975.926ENSPKIG00000020112-9975.926Paramormyrops_kingsleyae
ENSCING00000003340-9975.688ENSPKIG00000001237-9975.688Paramormyrops_kingsleyae
ENSCING00000003340-9973.853ENSPMGG00000010792rab5c9875.229Periophthalmus_magnuspinnatus
ENSCING00000003340-9976.168ENSPEMG00000017971Rab5c9976.168Peromyscus_maniculatus_bairdii
ENSCING00000003340-9975.000ENSPMAG00000000008rab5c9975.000Petromyzon_marinus
ENSCING00000003340-9974.074ENSPMAG00000007867rab5c9974.074Petromyzon_marinus
ENSCING00000003340-9974.766ENSPMAG00000001399rab5c9974.766Petromyzon_marinus
ENSCING00000003340-9975.234ENSPCIG00000020225-9975.234Phascolarctos_cinereus
ENSCING00000003340-10074.091ENSPLAG00000004790rab5c10074.545Poecilia_latipinna
ENSCING00000003340-9775.117ENSPLAG00000016333-9974.545Poecilia_latipinna
ENSCING00000003340-8383.425ENSPMEG00000012614-9974.091Poecilia_mexicana
ENSCING00000003340-10074.091ENSPMEG00000011336rab5c10074.545Poecilia_mexicana
ENSCING00000003340-10074.091ENSPREG00000010146rab5c10074.545Poecilia_reticulata
ENSCING00000003340-8382.222ENSPREG00000022167-8683.929Poecilia_reticulata
ENSCING00000003340-9976.168ENSPPYG00000008398RAB5C9976.168Pongo_abelii
ENSCING00000003340-9976.852ENSPCAG00000016412RAB5C9976.852Procavia_capensis
ENSCING00000003340-9977.103ENSPCOG00000026327RAB5C9977.103Propithecus_coquereli
ENSCING00000003340-9976.636ENSPVAG00000003867RAB5C9976.636Pteropus_vampyrus
ENSCING00000003340-9775.701ENSPNYG00000015851-9775.814Pundamilia_nyererei
ENSCING00000003340-10075.000ENSPNYG00000010615rab5c10075.000Pundamilia_nyererei
ENSCING00000003340-10075.113ENSPNAG00000028138rab5c10075.113Pygocentrus_nattereri
ENSCING00000003340-9775.117ENSPNAG00000002218-9975.117Pygocentrus_nattereri
ENSCING00000003340-9976.168ENSRNOG00000018568Rab5c9976.168Rattus_norvegicus
ENSCING00000003340-9976.168ENSRBIG00000031376RAB5C9976.168Rhinopithecus_bieti
ENSCING00000003340-9976.168ENSRROG00000032895RAB5C9976.168Rhinopithecus_roxellana
ENSCING00000003340-9976.168ENSSBOG00000032552-9976.168Saimiri_boliviensis_boliviensis
ENSCING00000003340-9975.701ENSSHAG00000005267-9975.701Sarcophilus_harrisii
ENSCING00000003340-10071.818ENSSFOG00015009988-10071.818Scleropages_formosus
ENSCING00000003340-8682.796ENSSMAG00000007323rab5c10074.545Scophthalmus_maximus
ENSCING00000003340-10075.455ENSSDUG00000023008rab5c10075.455Seriola_dumerili
ENSCING00000003340-10076.364ENSSLDG00000017771rab5c10076.364Seriola_lalandi_dorsalis
ENSCING00000003340-9975.234ENSSPUG00000012950-9975.234Sphenodon_punctatus
ENSCING00000003340-10075.000ENSSPAG00000006436rab5c10075.000Stegastes_partitus
ENSCING00000003340-9977.103ENSSSCG00000032467RAB5C9977.103Sus_scrofa
ENSCING00000003340-9974.886ENSTRUG00000015590rab5c9975.688Takifugu_rubripes
ENSCING00000003340-9578.095ENSTNIG00000011711rab5c9578.095Tetraodon_nigroviridis
ENSCING00000003340-9976.168ENSTBEG00000007092RAB5C9976.168Tupaia_belangeri
ENSCING00000003340-9976.389ENSTTRG00000006673RAB5C10076.389Tursiops_truncatus
ENSCING00000003340-9977.103ENSUAMG00000024343RAB5C9977.103Ursus_americanus
ENSCING00000003340-9977.103ENSUMAG00000023270RAB5C9977.103Ursus_maritimus
ENSCING00000003340-10074.091ENSXCOG00000016788rab5c10074.545Xiphophorus_couchianus
ENSCING00000003340-9079.293ENSXCOG00000006300-10074.439Xiphophorus_couchianus
ENSCING00000003340-10074.091ENSXMAG00000003266rab5c10074.545Xiphophorus_maculatus
ENSCING00000003340-9675.829ENSXMAG00000022179-10074.439Xiphophorus_maculatus

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