EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000003377 (Gene tree)
Gene ID: 100186476
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 5984 bases
Position: chr4:3103684-3109667
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000006920	GTP_EFTU	PF00009.27	9.4e-64	1	1
ENSCINP00000006920	GTP_EFTU_D2	PF03144.25	1.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000006920	-	2411	-	ENSCINP00000006920	736 (aa)	-	F7A713

Gene Model

Click here to download ENSCING00000003377's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000003377's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000003377	-	96	44.337	ENSG00000164347	GFM2	100	62.500	Homo_sapiens
ENSCING00000003377	-	96	43.497	ENSAPOG00000005965	gfm2	92	43.497	Acanthochromis_polyacanthus
ENSCING00000003377	-	95	44.130	ENSAMEG00000000544	GFM2	90	43.961	Ailuropoda_melanoleuca
ENSCING00000003377	-	95	42.936	ENSACIG00000003338	gfm2	99	43.154	Amphilophus_citrinellus
ENSCING00000003377	-	96	43.776	ENSAOCG00000014342	gfm2	92	43.776	Amphiprion_ocellaris
ENSCING00000003377	-	96	43.776	ENSAPEG00000000424	gfm2	92	43.776	Amphiprion_percula
ENSCING00000003377	-	96	43.077	ENSATEG00000010821	gfm2	96	40.922	Anabas_testudineus
ENSCING00000003377	-	96	44.306	ENSAPLG00000007221	GFM2	91	45.000	Anas_platyrhynchos
ENSCING00000003377	-	94	45.557	ENSACAG00000009011	GFM2	90	45.557	Anolis_carolinensis
ENSCING00000003377	-	74	50.339	ENSANAG00000027737	GFM2	90	38.904	Aotus_nancymaae
ENSCING00000003377	-	95	43.539	ENSACLG00000027430	gfm2	94	43.436	Astatotilapia_calliptera
ENSCING00000003377	-	96	45.315	ENSAMXG00000009979	gfm2	93	45.315	Astyanax_mexicanus
ENSCING00000003377	-	95	44.306	ENSBTAG00000015519	GFM2	92	42.525	Bos_taurus
ENSCING00000003377	-	95	36.828	WBGene00022491	Y119D3B.14	98	36.437	Caenorhabditis_elegans
ENSCING00000003377	-	96	44.150	ENSCJAG00000016802	GFM2	90	44.150	Callithrix_jacchus
ENSCING00000003377	-	95	43.776	ENSCAFG00000008298	GFM2	89	43.776	Canis_familiaris
ENSCING00000003377	-	95	43.776	ENSCAFG00020016998	GFM2	92	43.776	Canis_lupus_dingo
ENSCING00000003377	-	95	44.506	ENSCHIG00000012765	GFM2	91	44.506	Capra_hircus
ENSCING00000003377	-	59	50.452	ENSTSYG00000011664	GFM2	85	50.452	Carlito_syrichta
ENSCING00000003377	-	90	33.135	ENSCAPG00000003480	GFM2	88	33.135	Cavia_aperea
ENSCING00000003377	-	95	44.507	ENSCPOG00000006332	GFM2	92	44.507	Cavia_porcellus
ENSCING00000003377	-	96	44.460	ENSCCAG00000029580	GFM2	90	44.460	Cebus_capucinus
ENSCING00000003377	-	96	45.455	ENSCATG00000036394	GFM2	90	45.455	Cercocebus_atys
ENSCING00000003377	-	96	44.663	ENSCLAG00000013440	GFM2	90	44.663	Chinchilla_lanigera
ENSCING00000003377	-	96	45.315	ENSCSAG00000015464	GFM2	90	45.315	Chlorocebus_sabaeus
ENSCING00000003377	-	81	50.000	ENSCHOG00000002245	GFM2	76	50.000	Choloepus_hoffmanni
ENSCING00000003377	-	95	45.315	ENSCPBG00000000761	GFM2	93	45.315	Chrysemys_picta_bellii
ENSCING00000003377	-	96	75.779	ENSCSAVG00000002108	-	99	76.591	Ciona_savignyi
ENSCING00000003377	-	96	45.175	ENSCANG00000042500	GFM2	90	45.175	Colobus_angolensis_palliatus
ENSCING00000003377	-	95	44.568	ENSCGRG00001022802	Gfm2	90	44.568	Cricetulus_griseus_chok1gshd
ENSCING00000003377	-	95	44.568	ENSCGRG00000001439	Gfm2	90	44.568	Cricetulus_griseus_crigri
ENSCING00000003377	-	96	43.785	ENSCSEG00000013115	gfm2	95	43.785	Cynoglossus_semilaevis
ENSCING00000003377	-	96	42.340	ENSCVAG00000010057	gfm2	97	39.390	Cyprinodon_variegatus
ENSCING00000003377	-	96	44.663	ENSDARG00000005561	gfm2	93	44.663	Danio_rerio
ENSCING00000003377	-	96	44.212	ENSDNOG00000005118	GFM2	90	44.212	Dasypus_novemcinctus
ENSCING00000003377	-	96	44.568	ENSDORG00000016231	Gfm2	91	44.568	Dipodomys_ordii
ENSCING00000003377	-	96	36.791	FBgn0051159	mRRF2	96	39.748	Drosophila_melanogaster
ENSCING00000003377	-	72	51.039	ENSETEG00000004090	GFM2	67	51.039	Echinops_telfairi
ENSCING00000003377	-	83	70.323	ENSEBUG00000012181	gfm2	93	70.323	Eptatretus_burgeri
ENSCING00000003377	-	80	68.310	ENSEASG00005018285	GFM2	85	68.310	Equus_asinus_asinus
ENSCING00000003377	-	96	39.672	ENSECAG00000006640	GFM2	91	39.672	Equus_caballus
ENSCING00000003377	-	87	39.578	ENSEEUG00000004656	GFM2	84	39.578	Erinaceus_europaeus
ENSCING00000003377	-	96	42.378	ENSELUG00000003075	gfm2	92	42.378	Esox_lucius
ENSCING00000003377	-	95	44.212	ENSFCAG00000011977	GFM2	89	44.351	Felis_catus
ENSCING00000003377	-	96	45.417	ENSFALG00000010106	GFM2	91	45.417	Ficedula_albicollis
ENSCING00000003377	-	96	39.301	ENSFDAG00000004993	GFM2	73	65.143	Fukomys_damarensis
ENSCING00000003377	-	96	44.023	ENSFHEG00000006210	gfm2	92	44.023	Fundulus_heteroclitus
ENSCING00000003377	-	95	42.958	ENSGMOG00000003177	gfm2	92	43.099	Gadus_morhua
ENSCING00000003377	-	96	44.521	ENSGALG00000014939	GFM2	92	44.521	Gallus_gallus
ENSCING00000003377	-	94	42.837	ENSGAFG00000000439	gfm2	91	42.979	Gambusia_affinis
ENSCING00000003377	-	98	41.754	ENSGACG00000015889	gfm2	99	41.754	Gasterosteus_aculeatus
ENSCING00000003377	-	95	45.518	ENSGAGG00000012347	GFM2	91	45.518	Gopherus_agassizii
ENSCING00000003377	-	92	44.877	ENSGGOG00000013739	GFM2	90	45.029	Gorilla_gorilla
ENSCING00000003377	-	95	43.619	ENSHBUG00000011021	gfm2	92	43.515	Haplochromis_burtoni
ENSCING00000003377	-	96	43.680	ENSHGLG00000000419	GFM2	98	43.680	Heterocephalus_glaber_female
ENSCING00000003377	-	96	43.680	ENSHGLG00100018383	GFM2	98	43.680	Heterocephalus_glaber_male
ENSCING00000003377	-	95	43.380	ENSHCOG00000008208	gfm2	96	39.662	Hippocampus_comes
ENSCING00000003377	-	96	44.429	ENSIPUG00000024153	gfm2	93	44.073	Ictalurus_punctatus
ENSCING00000003377	-	95	44.085	ENSSTOG00000007931	GFM2	91	44.265	Ictidomys_tridecemlineatus
ENSCING00000003377	-	95	44.803	ENSJJAG00000024278	Gfm2	90	44.803	Jaculus_jaculus
ENSCING00000003377	-	96	42.475	ENSKMAG00000013277	gfm2	92	42.475	Kryptolebias_marmoratus
ENSCING00000003377	-	96	42.318	ENSLBEG00000020327	gfm2	92	42.318	Labrus_bergylta
ENSCING00000003377	-	96	43.646	ENSLACG00000004622	GFM2	91	43.544	Latimeria_chalumnae
ENSCING00000003377	-	94	45.364	ENSLOCG00000005368	gfm2	92	45.364	Lepisosteus_oculatus
ENSCING00000003377	-	96	43.994	ENSLAFG00000018575	GFM2	90	43.767	Loxodonta_africana
ENSCING00000003377	-	96	45.315	ENSMFAG00000039713	GFM2	90	45.315	Macaca_fascicularis
ENSCING00000003377	-	96	45.315	ENSMMUG00000019998	GFM2	93	45.315	Macaca_mulatta
ENSCING00000003377	-	96	45.315	ENSMNEG00000034666	GFM2	90	45.315	Macaca_nemestrina
ENSCING00000003377	-	96	45.455	ENSMLEG00000038075	GFM2	90	45.455	Mandrillus_leucophaeus
ENSCING00000003377	-	96	43.619	ENSMAMG00000000452	gfm2	99	42.356	Mastacembelus_armatus
ENSCING00000003377	-	95	43.539	ENSMZEG00005004469	gfm2	94	43.436	Maylandia_zebra
ENSCING00000003377	-	96	42.441	ENSMGAG00000015100	GFM2	91	42.441	Meleagris_gallopavo
ENSCING00000003377	-	95	43.733	ENSMAUG00000022103	Gfm2	90	43.733	Mesocricetus_auratus
ENSCING00000003377	-	96	44.244	ENSMICG00000000749	GFM2	90	44.244	Microcebus_murinus
ENSCING00000003377	-	62	50.431	ENSMOCG00000019032	-	86	50.431	Microtus_ochrogaster
ENSCING00000003377	-	96	44.693	ENSMOCG00000004402	-	87	51.078	Microtus_ochrogaster
ENSCING00000003377	-	96	42.061	ENSMMOG00000004758	gfm2	98	42.222	Mola_mola
ENSCING00000003377	-	96	44.028	ENSMODG00000001892	GFM2	92	44.028	Monodelphis_domestica
ENSCING00000003377	-	95	43.236	ENSMALG00000010323	gfm2	92	43.375	Monopterus_albus
ENSCING00000003377	-	96	43.811	MGP_CAROLIEiJ_G0018814	Gfm2	72	64.205	Mus_caroli
ENSCING00000003377	-	96	43.811	ENSMUSG00000021666	Gfm2	72	64.205	Mus_musculus
ENSCING00000003377	-	96	43.838	MGP_PahariEiJ_G0015889	Gfm2	72	64.205	Mus_pahari
ENSCING00000003377	-	96	43.672	MGP_SPRETEiJ_G0019696	Gfm2	72	64.205	Mus_spretus
ENSCING00000003377	-	94	40.993	ENSMPUG00000005688	GFM2	98	40.993	Mustela_putorius_furo
ENSCING00000003377	-	96	43.497	ENSMLUG00000004761	GFM2	90	43.497	Myotis_lucifugus
ENSCING00000003377	-	96	45.007	ENSNGAG00000013586	Gfm2	90	45.184	Nannospalax_galili
ENSCING00000003377	-	95	43.601	ENSNBRG00000009181	gfm2	93	43.497	Neolamprologus_brichardi
ENSCING00000003377	-	96	44.105	ENSNLEG00000004979	GFM2	90	44.660	Nomascus_leucogenys
ENSCING00000003377	-	73	51.613	ENSMEUG00000007885	-	68	51.613	Notamacropus_eugenii
ENSCING00000003377	-	95	38.028	ENSOPRG00000001846	GFM2	90	38.028	Ochotona_princeps
ENSCING00000003377	-	96	44.944	ENSODEG00000002193	GFM2	97	43.539	Octodon_degus
ENSCING00000003377	-	95	43.515	ENSONIG00000011183	gfm2	92	43.515	Oreochromis_niloticus
ENSCING00000003377	-	96	45.098	ENSOANG00000015776	GFM2	92	45.098	Ornithorhynchus_anatinus
ENSCING00000003377	-	96	44.600	ENSOCUG00000005349	GFM2	92	44.881	Oryctolagus_cuniculus
ENSCING00000003377	-	97	42.818	ENSORLG00000003360	gfm2	97	42.818	Oryzias_latipes
ENSCING00000003377	-	98	40.669	ENSORLG00020011110	gfm2	99	43.266	Oryzias_latipes_hni
ENSCING00000003377	-	98	42.339	ENSORLG00015018196	gfm2	99	43.123	Oryzias_latipes_hsok
ENSCING00000003377	-	95	43.626	ENSOMEG00000013774	gfm2	93	43.626	Oryzias_melastigma
ENSCING00000003377	-	96	44.755	ENSOGAG00000008961	GFM2	90	44.755	Otolemur_garnettii
ENSCING00000003377	-	96	44.049	ENSOARG00000004491	GFM2	91	44.049	Ovis_aries
ENSCING00000003377	-	96	44.244	ENSPPAG00000036359	GFM2	90	44.660	Pan_paniscus
ENSCING00000003377	-	95	44.011	ENSPPRG00000002671	GFM2	90	44.150	Panthera_pardus
ENSCING00000003377	-	95	44.290	ENSPTIG00000021698	GFM2	89	44.553	Panthera_tigris_altaica
ENSCING00000003377	-	96	44.244	ENSPTRG00000016989	GFM2	90	44.660	Pan_troglodytes
ENSCING00000003377	-	96	45.455	ENSPANG00000013600	GFM2	90	45.455	Papio_anubis
ENSCING00000003377	-	96	44.930	ENSPKIG00000018878	gfm2	95	44.930	Paramormyrops_kingsleyae
ENSCING00000003377	-	95	45.265	ENSPSIG00000012954	GFM2	93	45.265	Pelodiscus_sinensis
ENSCING00000003377	-	97	41.949	ENSPMGG00000016783	gfm2	99	41.949	Periophthalmus_magnuspinnatus
ENSCING00000003377	-	96	44.444	ENSPEMG00000000622	Gfm2	90	44.444	Peromyscus_maniculatus_bairdii
ENSCING00000003377	-	89	41.496	ENSPMAG00000000472	gfm2	99	42.341	Petromyzon_marinus
ENSCING00000003377	-	66	37.275	ENSPCIG00000020810	-	84	37.275	Phascolarctos_cinereus
ENSCING00000003377	-	96	42.737	ENSPFOG00000012381	gfm2	93	42.877	Poecilia_formosa
ENSCING00000003377	-	96	42.598	ENSPLAG00000014750	gfm2	96	39.804	Poecilia_latipinna
ENSCING00000003377	-	96	43.017	ENSPMEG00000005813	gfm2	99	42.797	Poecilia_mexicana
ENSCING00000003377	-	96	42.737	ENSPREG00000021026	gfm2	94	41.446	Poecilia_reticulata
ENSCING00000003377	-	96	44.938	ENSPPYG00000015556	GFM2	89	44.938	Pongo_abelii
ENSCING00000003377	-	87	50.928	ENSPCAG00000015284	GFM2	82	50.928	Procavia_capensis
ENSCING00000003377	-	96	43.664	ENSPCOG00000022606	GFM2	90	43.664	Propithecus_coquereli
ENSCING00000003377	-	95	43.380	ENSPVAG00000005391	GFM2	90	43.460	Pteropus_vampyrus
ENSCING00000003377	-	95	43.258	ENSPNYG00000001950	gfm2	94	43.156	Pundamilia_nyererei
ENSCING00000003377	-	96	44.044	ENSPNAG00000018467	gfm2	93	44.367	Pygocentrus_nattereri
ENSCING00000003377	-	95	44.770	ENSRNOG00000025285	Gfm2	90	44.770	Rattus_norvegicus
ENSCING00000003377	-	96	44.522	ENSRBIG00000040962	GFM2	90	44.522	Rhinopithecus_bieti
ENSCING00000003377	-	96	44.382	ENSRROG00000036459	GFM2	90	44.382	Rhinopithecus_roxellana
ENSCING00000003377	-	95	32.638	YJL102W	-	94	32.638	Saccharomyces_cerevisiae
ENSCING00000003377	-	96	44.398	ENSSBOG00000021848	GFM2	90	44.398	Saimiri_boliviensis_boliviensis
ENSCING00000003377	-	96	44.073	ENSSHAG00000017593	GFM2	91	44.413	Sarcophilus_harrisii
ENSCING00000003377	-	98	42.629	ENSSFOG00015016059	gfm2	98	42.777	Scleropages_formosus
ENSCING00000003377	-	95	43.724	ENSSMAG00000010773	gfm2	95	43.724	Scophthalmus_maximus
ENSCING00000003377	-	96	43.490	ENSSDUG00000021273	gfm2	97	43.310	Seriola_dumerili
ENSCING00000003377	-	96	43.448	ENSSLDG00000014952	gfm2	97	42.207	Seriola_lalandi_dorsalis
ENSCING00000003377	-	85	35.549	ENSSLDG00000000387	-	94	35.549	Seriola_lalandi_dorsalis
ENSCING00000003377	-	73	54.417	ENSSARG00000009381	GFM2	69	54.417	Sorex_araneus
ENSCING00000003377	-	95	40.839	ENSSPUG00000000593	GFM2	88	40.756	Sphenodon_punctatus
ENSCING00000003377	-	96	42.657	ENSSPAG00000014163	gfm2	96	41.760	Stegastes_partitus
ENSCING00000003377	-	95	44.180	ENSSSCG00000014074	GFM2	90	44.460	Sus_scrofa
ENSCING00000003377	-	96	45.417	ENSTGUG00000005985	GFM2	91	45.417	Taeniopygia_guttata
ENSCING00000003377	-	95	43.017	ENSTRUG00000018513	gfm2	93	43.436	Takifugu_rubripes
ENSCING00000003377	-	96	40.788	ENSTNIG00000013438	gfm2	97	40.788	Tetraodon_nigroviridis
ENSCING00000003377	-	90	42.251	ENSTBEG00000012713	GFM2	91	42.251	Tupaia_belangeri
ENSCING00000003377	-	95	43.412	ENSTTRG00000005188	GFM2	90	43.412	Tursiops_truncatus
ENSCING00000003377	-	95	44.068	ENSUMAG00000007328	GFM2	89	44.068	Ursus_maritimus
ENSCING00000003377	-	68	45.419	ENSVPAG00000007367	GFM2	65	45.419	Vicugna_pacos
ENSCING00000003377	-	95	43.557	ENSVVUG00000009245	GFM2	89	43.557	Vulpes_vulpes
ENSCING00000003377	-	94	42.361	ENSXETG00000005076	gfm2	98	42.164	Xenopus_tropicalis
ENSCING00000003377	-	96	42.420	ENSXCOG00000015007	gfm2	97	42.559	Xiphophorus_couchianus
ENSCING00000003377	-	96	42.496	ENSXMAG00000000772	gfm2	93	42.637	Xiphophorus_maculatus