EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000003384 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 2615 bases
Position: chr8:2595631-2598245
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000006941	zf-C2H2	PF00096.26	1.8e-23	1	4
ENSCINP00000006941	zf-C2H2	PF00096.26	1.8e-23	2	4
ENSCINP00000006941	zf-C2H2	PF00096.26	1.8e-23	3	4
ENSCINP00000006941	zf-C2H2	PF00096.26	1.8e-23	4	4
ENSCINP00000006941	zf-met	PF12874.7	4.9e-11	1	2
ENSCINP00000006941	zf-met	PF12874.7	4.9e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000006941	-	977	-	ENSCINP00000006941	293 (aa)	-	F6ZNG2

Gene Model

Click here to download ENSCING00000003384's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000003384's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000003384	-	96	36.000	ENSAPEG00000007889	-	74	36.000	Amphiprion_percula
ENSCING00000003384	-	92	30.120	ENSCING00000005713	-	69	30.120	Ciona_intestinalis
ENSCING00000003384	-	95	33.333	ENSCSAVG00000009574	-	98	30.247	Ciona_savignyi
ENSCING00000003384	-	98	31.410	ENSCSAVG00000006729	-	68	32.051	Ciona_savignyi
ENSCING00000003384	-	98	31.677	ENSCSEG00000005491	-	75	31.677	Cynoglossus_semilaevis
ENSCING00000003384	-	96	31.293	ENSCVAG00000002295	-	51	31.293	Cyprinodon_variegatus
ENSCING00000003384	-	98	30.400	ENSCVAG00000016098	-	83	31.788	Cyprinodon_variegatus
ENSCING00000003384	-	51	35.294	FBgn0033934	CG17385	58	35.294	Drosophila_melanogaster
ENSCING00000003384	-	96	34.337	ENSEBUG00000008392	-	75	36.364	Eptatretus_burgeri
ENSCING00000003384	-	98	35.570	ENSEBUG00000000735	-	97	35.570	Eptatretus_burgeri
ENSCING00000003384	-	99	35.374	ENSEBUG00000015522	-	65	35.374	Eptatretus_burgeri
ENSCING00000003384	-	96	33.333	ENSEBUG00000004841	-	80	34.000	Eptatretus_burgeri
ENSCING00000003384	-	98	32.877	ENSFHEG00000012990	-	92	32.877	Fundulus_heteroclitus
ENSCING00000003384	-	97	34.028	ENSFHEG00000013644	-	66	34.722	Fundulus_heteroclitus
ENSCING00000003384	-	98	34.783	ENSFHEG00000003596	-	65	34.783	Fundulus_heteroclitus
ENSCING00000003384	-	51	33.939	ENSGACG00000018415	-	98	32.727	Gasterosteus_aculeatus
ENSCING00000003384	-	96	32.026	ENSHCOG00000017437	-	69	34.586	Hippocampus_comes
ENSCING00000003384	-	98	32.323	ENSHCOG00000014881	-	68	32.323	Hippocampus_comes
ENSCING00000003384	-	94	42.308	ENSKMAG00000012909	-	78	42.308	Kryptolebias_marmoratus
ENSCING00000003384	-	96	31.579	ENSONIG00000003471	-	96	31.788	Oreochromis_niloticus
ENSCING00000003384	-	51	32.164	ENSONIG00000009894	-	87	33.333	Oreochromis_niloticus
ENSCING00000003384	-	97	30.000	ENSONIG00000007812	-	99	34.351	Oreochromis_niloticus
ENSCING00000003384	-	93	31.250	ENSORLG00015018254	-	87	42.000	Oryzias_latipes_hsok
ENSCING00000003384	-	54	35.088	ENSOMEG00000017673	-	62	35.088	Oryzias_melastigma
ENSCING00000003384	-	98	31.818	ENSPMGG00000000243	-	74	31.818	Periophthalmus_magnuspinnatus
ENSCING00000003384	-	99	31.609	ENSPMGG00000000458	-	97	32.394	Periophthalmus_magnuspinnatus
ENSCING00000003384	-	91	32.000	ENSPMGG00000019842	-	67	32.000	Periophthalmus_magnuspinnatus
ENSCING00000003384	-	53	39.344	ENSPMGG00000012289	-	60	39.344	Periophthalmus_magnuspinnatus
ENSCING00000003384	-	95	31.410	ENSPMAG00000007983	-	92	31.410	Petromyzon_marinus
ENSCING00000003384	-	98	32.192	ENSPFOG00000002879	-	99	32.192	Poecilia_formosa
ENSCING00000003384	-	98	32.886	ENSPMEG00000019229	-	63	32.886	Poecilia_mexicana
ENSCING00000003384	-	98	31.544	ENSPMEG00000022676	-	97	31.902	Poecilia_mexicana
ENSCING00000003384	-	92	32.174	ENSPREG00000015352	-	58	32.174	Poecilia_reticulata
ENSCING00000003384	-	98	32.215	ENSPREG00000007146	-	63	32.215	Poecilia_reticulata
ENSCING00000003384	-	94	31.765	ENSSDUG00000000946	-	90	31.765	Seriola_dumerili
ENSCING00000003384	-	61	36.782	ENSSLDG00000002515	-	65	36.782	Seriola_lalandi_dorsalis
ENSCING00000003384	-	66	35.556	ENSSPAG00000009405	-	50	35.556	Stegastes_partitus
ENSCING00000003384	-	98	31.707	ENSTNIG00000008154	-	53	34.228	Tetraodon_nigroviridis