EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000003395 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 8799 bases
Position: chrHT000025.1:463584-472382
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000006949	DRIM	PF07539.12	7.5e-133	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000006949	-	7944	-	ENSCINP00000006949	2648 (aa)	-	F6ZN98

Gene Model

Click here to download ENSCING00000003395's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000003395's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000003395	-	95	31.760	ENSACLG00000008064	utp20	98	32.272	Astatotilapia_calliptera
ENSCING00000003395	-	98	31.066	ENSBTAG00000003239	UTP20	99	31.066	Bos_taurus
ENSCING00000003395	-	96	30.083	ENSCAPG00000014920	UTP20	96	30.033	Cavia_aperea
ENSCING00000003395	-	99	30.266	ENSCLAG00000011569	UTP20	99	30.302	Chinchilla_lanigera
ENSCING00000003395	-	76	41.270	ENSCHOG00000003532	UTP20	76	41.270	Choloepus_hoffmanni
ENSCING00000003395	-	96	65.956	ENSCSAVG00000008252	-	99	65.956	Ciona_savignyi
ENSCING00000003395	-	75	45.113	ENSETEG00000019983	UTP20	80	45.113	Echinops_telfairi
ENSCING00000003395	-	85	43.265	ENSEASG00005019981	UTP20	86	43.265	Equus_asinus_asinus
ENSCING00000003395	-	85	43.265	ENSECAG00000006876	UTP20	86	43.265	Equus_caballus
ENSCING00000003395	-	55	36.364	ENSEEUG00000003774	UTP20	57	36.364	Erinaceus_europaeus
ENSCING00000003395	-	87	38.699	ENSFHEG00000004142	utp20	93	38.699	Fundulus_heteroclitus
ENSCING00000003395	-	69	30.919	ENSGAGG00000011169	UTP20	96	30.866	Gopherus_agassizii
ENSCING00000003395	-	91	31.263	ENSHCOG00000005421	utp20	93	30.591	Hippocampus_comes
ENSCING00000003395	-	86	36.316	ENSLOCG00000015197	utp20	92	36.316	Lepisosteus_oculatus
ENSCING00000003395	-	65	47.458	ENSNBRG00000019464	utp20	82	47.458	Neolamprologus_brichardi
ENSCING00000003395	-	78	47.059	ENSOPRG00000010546	UTP20	69	47.059	Ochotona_princeps
ENSCING00000003395	-	89	36.364	ENSORLG00000008900	utp20	93	36.364	Oryzias_latipes
ENSCING00000003395	-	86	38.983	ENSORLG00020005879	utp20	91	38.983	Oryzias_latipes_hni
ENSCING00000003395	-	86	39.249	ENSORLG00015002843	utp20	91	39.249	Oryzias_latipes_hsok
ENSCING00000003395	-	89	36.080	ENSOMEG00000023583	utp20	94	36.080	Oryzias_melastigma
ENSCING00000003395	-	65	41.951	ENSPCAG00000012791	UTP20	74	41.951	Procavia_capensis
ENSCING00000003395	-	81	32.558	ENSTBEG00000011917	UTP20	78	32.558	Tupaia_belangeri
ENSCING00000003395	-	78	37.222	ENSVPAG00000011620	UTP20	91	30.338	Vicugna_pacos
ENSCING00000003395	-	96	30.812	ENSVVUG00000018110	UTP20	95	30.812	Vulpes_vulpes