EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000003470 (Gene tree)
Gene ID: 778803
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 906 bases
Position: chrHT000074.1:187643-188548
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000007111	zf-C2H2	PF00096.26	2.3e-54	1	10
ENSCINP00000007111	zf-C2H2	PF00096.26	2.3e-54	2	10
ENSCINP00000007111	zf-C2H2	PF00096.26	2.3e-54	3	10
ENSCINP00000007111	zf-C2H2	PF00096.26	2.3e-54	4	10
ENSCINP00000007111	zf-C2H2	PF00096.26	2.3e-54	5	10
ENSCINP00000007111	zf-C2H2	PF00096.26	2.3e-54	6	10
ENSCINP00000007111	zf-C2H2	PF00096.26	2.3e-54	7	10
ENSCINP00000007111	zf-C2H2	PF00096.26	2.3e-54	8	10
ENSCINP00000007111	zf-C2H2	PF00096.26	2.3e-54	9	10
ENSCINP00000007111	zf-C2H2	PF00096.26	2.3e-54	10	10
ENSCINP00000007111	zf-met	PF12874.7	2.4e-14	1	2
ENSCINP00000007111	zf-met	PF12874.7	2.4e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000007111	-	906	-	ENSCINP00000007111	301 (aa)	-	F6UAX0

Gene Model

Click here to download ENSCING00000003470's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000003470's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000003470	-	100	64.977	ENSCING00000018801	zf(c2h2)-138	90	64.977	Ciona_intestinalis
ENSCING00000003470	-	96	48.951	ENSCSAVG00000010156	-	94	48.951	Ciona_savignyi
ENSCING00000003470	-	94	57.554	ENSCGRG00001013602	-	96	57.554	Cricetulus_griseus_chok1gshd
ENSCING00000003470	-	94	51.852	ENSCGRG00001002297	-	86	51.852	Cricetulus_griseus_chok1gshd
ENSCING00000003470	-	94	56.306	ENSCGRG00001007163	-	82	56.306	Cricetulus_griseus_chok1gshd
ENSCING00000003470	-	94	55.556	ENSCGRG00000018332	Zfp53	84	55.556	Cricetulus_griseus_crigri
ENSCING00000003470	-	94	54.579	ENSCGRG00000000778	-	86	54.506	Cricetulus_griseus_crigri
ENSCING00000003470	-	94	47.535	ENSEBUG00000008792	-	88	47.535	Eptatretus_burgeri
ENSCING00000003470	-	94	49.823	ENSEBUG00000016878	-	84	49.823	Eptatretus_burgeri
ENSCING00000003470	-	99	46.643	ENSEBUG00000001525	-	85	46.643	Eptatretus_burgeri
ENSCING00000003470	-	94	53.047	ENSEBUG00000012823	-	77	53.047	Eptatretus_burgeri
ENSCING00000003470	-	95	51.835	ENSEBUG00000005655	-	75	48.828	Eptatretus_burgeri
ENSCING00000003470	-	99	46.643	ENSEBUG00000012454	-	93	46.643	Eptatretus_burgeri
ENSCING00000003470	-	94	57.721	ENSMAUG00000000939	-	78	57.721	Mesocricetus_auratus
ENSCING00000003470	-	94	54.506	ENSMAUG00000004844	-	91	54.506	Mesocricetus_auratus
ENSCING00000003470	-	94	56.318	ENSMAUG00000005974	-	90	56.318	Mesocricetus_auratus
ENSCING00000003470	-	94	56.828	ENSMOCG00000006946	Zfp53	87	56.828	Microtus_ochrogaster
ENSCING00000003470	-	94	60.256	ENSMOCG00000007851	-	90	60.256	Microtus_ochrogaster
ENSCING00000003470	-	95	58.407	MGP_CAROLIEiJ_G0021132	Zfp948	89	58.407	Mus_caroli
ENSCING00000003470	-	94	56.184	ENSMUSG00000062743	Zfp677	84	56.184	Mus_musculus
ENSCING00000003470	-	94	44.656	ENSPSIG00000009270	-	79	44.656	Pelodiscus_sinensis
ENSCING00000003470	-	94	54.545	ENSPEMG00000007241	-	96	54.545	Peromyscus_maniculatus_bairdii
ENSCING00000003470	-	94	57.875	ENSPEMG00000023883	-	85	57.875	Peromyscus_maniculatus_bairdii
ENSCING00000003470	-	94	56.184	ENSRNOG00000052406	LOC102552527	87	56.184	Rattus_norvegicus