EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000003506 (Gene tree)
Gene ID: 100183370
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 10503 bases
Position: chr14:2861535-2872037
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000007200	ARS2	PF04959.13	3.3e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000007200	-	2714	-	ENSCINP00000007200	857 (aa)	-	F7BHR3

Gene Model

Click here to download ENSCING00000003506's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000003506's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000003506	-	54	52.292	ENSG00000087087	SRRT	96	55.556	Homo_sapiens
ENSCING00000003506	-	54	51.037	ENSAPOG00000002304	srrt	100	41.505	Acanthochromis_polyacanthus
ENSCING00000003506	-	54	51.674	ENSAMEG00000014506	SRRT	100	40.943	Ailuropoda_melanoleuca
ENSCING00000003506	-	54	51.245	ENSACIG00000015795	srrt	100	41.842	Amphilophus_citrinellus
ENSCING00000003506	-	75	51.037	ENSAOCG00000009693	srrt	100	42.304	Amphiprion_ocellaris
ENSCING00000003506	-	54	49.163	ENSAOCG00000009189	-	100	39.676	Amphiprion_ocellaris
ENSCING00000003506	-	75	51.037	ENSAPEG00000003646	srrt	95	48.008	Amphiprion_percula
ENSCING00000003506	-	54	49.163	ENSAPEG00000020016	-	100	39.676	Amphiprion_percula
ENSCING00000003506	-	54	51.255	ENSATEG00000014425	srrt	100	41.921	Anabas_testudineus
ENSCING00000003506	-	55	48.447	ENSATEG00000003652	-	86	48.247	Anabas_testudineus
ENSCING00000003506	-	55	52.092	ENSACAG00000001014	SRRT	100	41.602	Anolis_carolinensis
ENSCING00000003506	-	54	52.075	ENSANAG00000031718	SRRT	100	41.996	Aotus_nancymaae
ENSCING00000003506	-	54	50.622	ENSACLG00000013156	srrt	96	40.426	Astatotilapia_calliptera
ENSCING00000003506	-	54	51.875	ENSAMXG00000016671	srrt	97	41.477	Astyanax_mexicanus
ENSCING00000003506	-	54	51.867	ENSBTAG00000001134	SRRT	100	42.637	Bos_taurus
ENSCING00000003506	-	67	41.837	WBGene00017085	E01A2.2	94	38.523	Caenorhabditis_elegans
ENSCING00000003506	-	54	51.867	ENSCJAG00000014917	SRRT	100	42.064	Callithrix_jacchus
ENSCING00000003506	-	54	52.183	ENSCAFG00000023538	SRRT	100	42.261	Canis_familiaris
ENSCING00000003506	-	54	52.401	ENSCAFG00020013358	SRRT	100	42.354	Canis_lupus_dingo
ENSCING00000003506	-	54	51.844	ENSCHIG00000010495	SRRT	100	42.354	Capra_hircus
ENSCING00000003506	-	54	52.083	ENSTSYG00000036426	SRRT	96	41.877	Carlito_syrichta
ENSCING00000003506	-	54	51.464	ENSCAPG00000013586	SRRT	100	46.593	Cavia_aperea
ENSCING00000003506	-	77	51.440	ENSCPOG00000001739	SRRT	100	42.591	Cavia_porcellus
ENSCING00000003506	-	54	52.075	ENSCCAG00000015877	SRRT	100	41.996	Cebus_capucinus
ENSCING00000003506	-	54	52.292	ENSCATG00000036306	SRRT	100	43.187	Cercocebus_atys
ENSCING00000003506	-	54	52.075	ENSCLAG00000007568	SRRT	97	46.792	Chinchilla_lanigera
ENSCING00000003506	-	54	52.075	ENSCSAG00000017996	SRRT	100	42.967	Chlorocebus_sabaeus
ENSCING00000003506	-	53	48.936	ENSCHOG00000007815	SRRT	64	48.538	Choloepus_hoffmanni
ENSCING00000003506	-	71	43.038	ENSCPBG00000011553	SRRT	84	42.145	Chrysemys_picta_bellii
ENSCING00000003506	-	100	69.767	ENSCSAVG00000008394	-	90	83.947	Ciona_savignyi
ENSCING00000003506	-	54	52.292	ENSCANG00000034556	SRRT	100	43.062	Colobus_angolensis_palliatus
ENSCING00000003506	-	54	51.867	ENSCGRG00001001594	Srrt	100	42.077	Cricetulus_griseus_chok1gshd
ENSCING00000003506	-	61	51.440	ENSCGRG00000007292	Srrt	97	47.170	Cricetulus_griseus_crigri
ENSCING00000003506	-	55	48.649	ENSCSEG00000005233	-	100	38.154	Cynoglossus_semilaevis
ENSCING00000003506	-	54	49.254	ENSCSEG00000017878	srrt	100	39.339	Cynoglossus_semilaevis
ENSCING00000003506	-	86	45.623	ENSCVAG00000019848	srrt	100	42.665	Cyprinodon_variegatus
ENSCING00000003506	-	54	52.075	ENSDNOG00000003851	SRRT	100	42.747	Dasypus_novemcinctus
ENSCING00000003506	-	54	50.622	ENSDORG00000005584	Srrt	100	42.316	Dipodomys_ordii
ENSCING00000003506	-	86	49.592	FBgn0033062	Ars2	77	48.795	Drosophila_melanogaster
ENSCING00000003506	-	62	50.816	ENSETEG00000016175	SRRT	84	47.007	Echinops_telfairi
ENSCING00000003506	-	85	39.510	ENSEBUG00000008517	-	84	50.000	Eptatretus_burgeri
ENSCING00000003506	-	54	52.075	ENSEASG00005016956	SRRT	100	42.215	Equus_asinus_asinus
ENSCING00000003506	-	54	52.075	ENSECAG00000012292	SRRT	100	42.325	Equus_caballus
ENSCING00000003506	-	55	51.553	ENSELUG00000021216	-	100	40.948	Esox_lucius
ENSCING00000003506	-	54	52.282	ENSFCAG00000006855	SRRT	100	42.747	Felis_catus
ENSCING00000003506	-	54	50.207	ENSFDAG00000021347	SRRT	97	45.489	Fukomys_damarensis
ENSCING00000003506	-	65	51.613	ENSFHEG00000002756	srrt	91	51.852	Fundulus_heteroclitus
ENSCING00000003506	-	55	43.232	ENSFHEG00000004105	-	97	42.178	Fundulus_heteroclitus
ENSCING00000003506	-	54	49.359	ENSGMOG00000018619	srrt	100	40.409	Gadus_morhua
ENSCING00000003506	-	67	49.460	ENSGMOG00000018694	-	69	48.608	Gadus_morhua
ENSCING00000003506	-	54	51.245	ENSGAFG00000005423	srrt	100	40.885	Gambusia_affinis
ENSCING00000003506	-	54	47.059	ENSGAFG00000020383	-	100	39.663	Gambusia_affinis
ENSCING00000003506	-	53	48.807	ENSGACG00000001100	-	100	38.245	Gasterosteus_aculeatus
ENSCING00000003506	-	86	44.430	ENSGACG00000020387	srrt	100	41.828	Gasterosteus_aculeatus
ENSCING00000003506	-	54	52.292	ENSGGOG00000001508	SRRT	99	42.967	Gorilla_gorilla
ENSCING00000003506	-	54	50.622	ENSHBUG00000002942	srrt	96	40.405	Haplochromis_burtoni
ENSCING00000003506	-	54	51.646	ENSHGLG00000008344	Srrt	98	45.310	Heterocephalus_glaber_female
ENSCING00000003506	-	54	52.292	ENSHGLG00100018857	Srrt	98	47.538	Heterocephalus_glaber_male
ENSCING00000003506	-	86	43.350	ENSHCOG00000005403	srrt	100	40.216	Hippocampus_comes
ENSCING00000003506	-	69	47.890	ENSHCOG00000008904	-	95	44.821	Hippocampus_comes
ENSCING00000003506	-	54	52.292	ENSSTOG00000013776	SRRT	100	42.841	Ictidomys_tridecemlineatus
ENSCING00000003506	-	86	43.455	ENSJJAG00000010446	Srrt	97	47.710	Jaculus_jaculus
ENSCING00000003506	-	55	48.367	ENSKMAG00000008468	-	100	39.739	Kryptolebias_marmoratus
ENSCING00000003506	-	86	45.928	ENSKMAG00000013599	srrt	100	42.983	Kryptolebias_marmoratus
ENSCING00000003506	-	89	42.484	ENSLBEG00000016308	srrt	100	41.630	Labrus_bergylta
ENSCING00000003506	-	88	37.124	ENSLACG00000001089	SRRT	100	36.819	Latimeria_chalumnae
ENSCING00000003506	-	53	51.534	ENSLOCG00000013658	srrt	59	51.462	Lepisosteus_oculatus
ENSCING00000003506	-	54	52.075	ENSLAFG00000007725	SRRT	100	43.063	Loxodonta_africana
ENSCING00000003506	-	54	52.292	ENSMFAG00000033745	SRRT	100	43.062	Macaca_fascicularis
ENSCING00000003506	-	54	52.075	ENSMMUG00000021255	SRRT	100	42.967	Macaca_mulatta
ENSCING00000003506	-	54	52.075	ENSMNEG00000041864	SRRT	100	43.077	Macaca_nemestrina
ENSCING00000003506	-	54	52.292	ENSMLEG00000029479	SRRT	100	43.062	Mandrillus_leucophaeus
ENSCING00000003506	-	55	47.862	ENSMAMG00000010681	-	100	40.463	Mastacembelus_armatus
ENSCING00000003506	-	54	50.531	ENSMAMG00000014311	srrt	100	41.594	Mastacembelus_armatus
ENSCING00000003506	-	54	50.622	ENSMZEG00005016135	srrt	96	40.405	Maylandia_zebra
ENSCING00000003506	-	54	51.660	ENSMAUG00000011386	Srrt	100	46.753	Mesocricetus_auratus
ENSCING00000003506	-	54	51.867	ENSMICG00000009471	SRRT	100	42.747	Microcebus_murinus
ENSCING00000003506	-	54	51.867	ENSMOCG00000001971	Srrt	97	47.529	Microtus_ochrogaster
ENSCING00000003506	-	54	48.832	ENSMMOG00000011137	-	88	41.098	Mola_mola
ENSCING00000003506	-	86	45.382	ENSMMOG00000016399	srrt	100	42.536	Mola_mola
ENSCING00000003506	-	54	48.473	ENSMODG00000004862	SRRT	91	49.605	Monodelphis_domestica
ENSCING00000003506	-	55	41.213	ENSMALG00000005567	-	85	41.314	Monopterus_albus
ENSCING00000003506	-	86	43.622	ENSMALG00000018604	srrt	100	41.731	Monopterus_albus
ENSCING00000003506	-	54	51.867	MGP_CAROLIEiJ_G0027870	Srrt	93	52.874	Mus_caroli
ENSCING00000003506	-	54	51.867	ENSMUSG00000037364	Srrt	93	52.874	Mus_musculus
ENSCING00000003506	-	54	51.867	MGP_PahariEiJ_G0024456	Srrt	93	52.874	Mus_pahari
ENSCING00000003506	-	54	51.867	MGP_SPRETEiJ_G0028875	Srrt	93	52.874	Mus_spretus
ENSCING00000003506	-	54	52.075	ENSMPUG00000015839	SRRT	100	42.215	Mustela_putorius_furo
ENSCING00000003506	-	54	51.660	ENSMLUG00000009975	SRRT	100	42.232	Myotis_lucifugus
ENSCING00000003506	-	54	51.867	ENSNGAG00000023715	Srrt	100	44.855	Nannospalax_galili
ENSCING00000003506	-	54	49.580	ENSNBRG00000019100	srrt	100	41.311	Neolamprologus_brichardi
ENSCING00000003506	-	82	47.246	ENSNLEG00000011987	SRRT	98	40.241	Nomascus_leucogenys
ENSCING00000003506	-	54	44.211	ENSMEUG00000011941	SRRT	100	36.964	Notamacropus_eugenii
ENSCING00000003506	-	62	48.946	ENSOPRG00000002502	-	55	56.923	Ochotona_princeps
ENSCING00000003506	-	54	51.674	ENSODEG00000016856	SRRT	100	42.358	Octodon_degus
ENSCING00000003506	-	54	50.622	ENSONIG00000004242	srrt	100	40.575	Oreochromis_niloticus
ENSCING00000003506	-	86	44.819	ENSORLG00000008120	srrt	100	42.546	Oryzias_latipes
ENSCING00000003506	-	86	44.659	ENSORLG00020003058	srrt	100	42.437	Oryzias_latipes_hni
ENSCING00000003506	-	86	44.689	ENSORLG00015008062	srrt	100	42.437	Oryzias_latipes_hsok
ENSCING00000003506	-	71	51.250	ENSOMEG00000003155	srrt	100	41.730	Oryzias_melastigma
ENSCING00000003506	-	55	50.520	ENSOMEG00000006963	-	100	40.980	Oryzias_melastigma
ENSCING00000003506	-	54	52.075	ENSOGAG00000017242	SRRT	100	42.857	Otolemur_garnettii
ENSCING00000003506	-	54	52.083	ENSOARG00000015645	SRRT	100	42.308	Ovis_aries
ENSCING00000003506	-	54	52.292	ENSPPAG00000041090	SRRT	100	43.062	Pan_paniscus
ENSCING00000003506	-	54	52.510	ENSPPRG00000009557	SRRT	100	42.278	Panthera_pardus
ENSCING00000003506	-	54	52.282	ENSPTIG00000014355	SRRT	100	42.747	Panthera_tigris_altaica
ENSCING00000003506	-	54	52.292	ENSPTRG00000019511	SRRT	100	43.062	Pan_troglodytes
ENSCING00000003506	-	54	51.224	ENSPANG00000020763	SRRT	94	42.606	Papio_anubis
ENSCING00000003506	-	86	45.046	ENSPKIG00000005434	srrt	100	42.431	Paramormyrops_kingsleyae
ENSCING00000003506	-	55	52.119	ENSPKIG00000022212	-	100	39.894	Paramormyrops_kingsleyae
ENSCING00000003506	-	54	51.915	ENSPSIG00000016311	SRRT	100	41.685	Pelodiscus_sinensis
ENSCING00000003506	-	54	50.312	ENSPMGG00000002841	srrt	100	41.750	Periophthalmus_magnuspinnatus
ENSCING00000003506	-	54	51.046	ENSPEMG00000010834	Srrt	97	47.328	Peromyscus_maniculatus_bairdii
ENSCING00000003506	-	85	42.838	ENSPMAG00000009614	-	100	38.852	Petromyzon_marinus
ENSCING00000003506	-	56	50.806	ENSPCIG00000000816	SRRT	100	42.257	Phascolarctos_cinereus
ENSCING00000003506	-	54	50.830	ENSPFOG00000005704	srrt	100	41.858	Poecilia_formosa
ENSCING00000003506	-	54	47.479	ENSPFOG00000016554	-	100	39.798	Poecilia_formosa
ENSCING00000003506	-	54	50.208	ENSPLAG00000021992	srrt	100	40.753	Poecilia_latipinna
ENSCING00000003506	-	54	47.689	ENSPLAG00000004526	-	100	39.418	Poecilia_latipinna
ENSCING00000003506	-	54	50.830	ENSPMEG00000001182	srrt	100	42.123	Poecilia_mexicana
ENSCING00000003506	-	86	42.931	ENSPREG00000022308	srrt	100	41.858	Poecilia_reticulata
ENSCING00000003506	-	71	50.307	ENSPCAG00000001621	SRRT	100	41.593	Procavia_capensis
ENSCING00000003506	-	54	52.292	ENSPCOG00000025751	SRRT	100	42.747	Propithecus_coquereli
ENSCING00000003506	-	63	45.436	ENSPVAG00000000834	SRRT	100	38.710	Pteropus_vampyrus
ENSCING00000003506	-	54	50.622	ENSPNYG00000018710	srrt	100	40.405	Pundamilia_nyererei
ENSCING00000003506	-	62	51.562	ENSPNAG00000010629	srrt	100	33.666	Pygocentrus_nattereri
ENSCING00000003506	-	54	43.265	ENSRNOG00000048277	AABR07035787.1	99	41.002	Rattus_norvegicus
ENSCING00000003506	-	54	52.075	ENSRBIG00000035718	SRRT	100	42.967	Rhinopithecus_bieti
ENSCING00000003506	-	54	52.075	ENSRROG00000030622	SRRT	100	42.967	Rhinopithecus_roxellana
ENSCING00000003506	-	54	52.292	ENSSBOG00000033570	SRRT	100	41.996	Saimiri_boliviensis_boliviensis
ENSCING00000003506	-	56	50.402	ENSSHAG00000007349	-	99	44.970	Sarcophilus_harrisii
ENSCING00000003506	-	54	52.211	ENSSFOG00015017293	srrt	100	40.644	Scleropages_formosus
ENSCING00000003506	-	54	47.303	ENSSMAG00000018195	-	100	38.851	Scophthalmus_maximus
ENSCING00000003506	-	86	44.887	ENSSMAG00000015342	srrt	100	42.316	Scophthalmus_maximus
ENSCING00000003506	-	54	51.983	ENSSDUG00000012049	srrt	100	42.042	Seriola_dumerili
ENSCING00000003506	-	55	40.249	ENSSDUG00000002051	-	94	40.417	Seriola_dumerili
ENSCING00000003506	-	71	51.983	ENSSLDG00000017477	srrt	100	42.191	Seriola_lalandi_dorsalis
ENSCING00000003506	-	54	49.793	ENSSPAG00000005665	srrt	98	41.953	Stegastes_partitus
ENSCING00000003506	-	54	41.247	ENSSPAG00000018943	-	98	40.515	Stegastes_partitus
ENSCING00000003506	-	52	51.844	ENSSSCG00000024789	SRRT	98	41.114	Sus_scrofa
ENSCING00000003506	-	54	51.046	ENSTRUG00000016075	srrt	100	40.514	Takifugu_rubripes
ENSCING00000003506	-	56	47.791	ENSTNIG00000003111	-	100	39.107	Tetraodon_nigroviridis
ENSCING00000003506	-	54	50.000	ENSTNIG00000011779	srrt	99	42.363	Tetraodon_nigroviridis
ENSCING00000003506	-	54	52.075	ENSTTRG00000011104	SRRT	100	42.123	Tursiops_truncatus
ENSCING00000003506	-	54	52.075	ENSUAMG00000027997	SRRT	96	42.395	Ursus_americanus
ENSCING00000003506	-	54	52.075	ENSUMAG00000011295	SRRT	100	42.215	Ursus_maritimus
ENSCING00000003506	-	54	52.183	ENSVVUG00000023572	SRRT	100	42.261	Vulpes_vulpes
ENSCING00000003506	-	62	52.239	ENSXETG00000025124	srrt	78	48.996	Xenopus_tropicalis
ENSCING00000003506	-	54	40.043	ENSXCOG00000013105	-	91	40.552	Xiphophorus_couchianus
ENSCING00000003506	-	54	47.269	ENSXMAG00000002090	-	100	39.888	Xiphophorus_maculatus
ENSCING00000003506	-	86	43.857	ENSXMAG00000007627	srrt	100	42.536	Xiphophorus_maculatus