EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000003567 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 11238 bases
Position: chr4:2453349-2464586
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000007371	tRNA_bind_2	PF13725.6	1.3e-60	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000007371	-	3219	-	ENSCINP00000007371	956 (aa)	-	F6Y8C3

Gene Model

Click here to download ENSCING00000003567's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000003567's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000003567	-	99	64.907	ENSG00000135372	NAT10	99	78.322	Homo_sapiens
ENSCING00000003567	-	100	66.460	ENSAPOG00000010634	nat10	91	66.460	Acanthochromis_polyacanthus
ENSCING00000003567	-	99	64.845	ENSAMEG00000008124	NAT10	92	64.948	Ailuropoda_melanoleuca
ENSCING00000003567	-	100	64.293	ENSACIG00000017852	nat10	91	64.293	Amphilophus_citrinellus
ENSCING00000003567	-	100	66.770	ENSAOCG00000004556	nat10	91	66.770	Amphiprion_ocellaris
ENSCING00000003567	-	100	66.770	ENSAPEG00000001116	nat10	91	66.770	Amphiprion_percula
ENSCING00000003567	-	100	66.254	ENSATEG00000015592	nat10	91	66.357	Anabas_testudineus
ENSCING00000003567	-	96	65.809	ENSAPLG00000007638	NAT10	93	65.916	Anas_platyrhynchos
ENSCING00000003567	-	99	65.186	ENSACAG00000013465	NAT10	93	65.393	Anolis_carolinensis
ENSCING00000003567	-	99	64.907	ENSANAG00000026850	NAT10	90	67.866	Aotus_nancymaae
ENSCING00000003567	-	100	66.667	ENSACLG00000007336	nat10	91	66.667	Astatotilapia_calliptera
ENSCING00000003567	-	100	65.564	ENSAMXG00000038087	nat10	98	65.564	Astyanax_mexicanus
ENSCING00000003567	-	99	64.912	ENSBTAG00000016747	NAT10	92	65.186	Bos_taurus
ENSCING00000003567	-	99	53.656	WBGene00018866	nath-10	92	53.656	Caenorhabditis_elegans
ENSCING00000003567	-	99	64.560	ENSCJAG00000010585	NAT10	92	64.803	Callithrix_jacchus
ENSCING00000003567	-	99	65.258	ENSCAFG00000007028	NAT10	92	65.361	Canis_familiaris
ENSCING00000003567	-	99	65.258	ENSCAFG00020004530	NAT10	96	65.361	Canis_lupus_dingo
ENSCING00000003567	-	99	64.948	ENSCHIG00000026081	NAT10	92	65.222	Capra_hircus
ENSCING00000003567	-	99	64.182	ENSTSYG00000013519	NAT10	92	64.286	Carlito_syrichta
ENSCING00000003567	-	100	64.736	ENSCPOG00000015736	NAT10	92	64.943	Cavia_porcellus
ENSCING00000003567	-	99	64.907	ENSCCAG00000003512	NAT10	92	65.150	Cebus_capucinus
ENSCING00000003567	-	99	64.803	ENSCATG00000037820	NAT10	90	67.746	Cercocebus_atys
ENSCING00000003567	-	100	64.633	ENSCLAG00000016692	NAT10	92	64.736	Chinchilla_lanigera
ENSCING00000003567	-	99	64.803	ENSCSAG00000005383	NAT10	92	65.047	Chlorocebus_sabaeus
ENSCING00000003567	-	92	53.707	ENSCHOG00000001629	NAT10	77	59.585	Choloepus_hoffmanni
ENSCING00000003567	-	99	66.805	ENSCPBG00000012518	NAT10	95	66.909	Chrysemys_picta_bellii
ENSCING00000003567	-	99	64.907	ENSCANG00000033310	NAT10	92	65.150	Colobus_angolensis_palliatus
ENSCING00000003567	-	99	64.700	ENSCGRG00001010534	NAT10	96	64.943	Cricetulus_griseus_chok1gshd
ENSCING00000003567	-	99	64.700	ENSCGRG00000012271	NAT10	92	64.943	Cricetulus_griseus_crigri
ENSCING00000003567	-	100	66.357	ENSCSEG00000013106	nat10	92	66.744	Cynoglossus_semilaevis
ENSCING00000003567	-	100	65.907	ENSDARG00000054259	nat10	92	66.010	Danio_rerio
ENSCING00000003567	-	99	64.536	ENSDNOG00000042452	NAT10	92	64.882	Dasypus_novemcinctus
ENSCING00000003567	-	99	64.264	ENSDORG00000006567	Nat10	92	64.736	Dipodomys_ordii
ENSCING00000003567	-	100	51.458	FBgn0027330	l(1)G0020	95	51.458	Drosophila_melanogaster
ENSCING00000003567	-	71	64.706	ENSETEG00000020037	-	69	64.706	Echinops_telfairi
ENSCING00000003567	-	99	65.052	ENSEBUG00000012661	nat10	93	65.155	Eptatretus_burgeri
ENSCING00000003567	-	99	64.596	ENSEASG00005020208	NAT10	92	64.840	Equus_asinus_asinus
ENSCING00000003567	-	99	64.675	ENSECAG00000011621	NAT10	99	64.921	Equus_caballus
ENSCING00000003567	-	99	57.927	ENSEEUG00000006899	NAT10	92	58.282	Erinaceus_europaeus
ENSCING00000003567	-	100	65.638	ENSELUG00000000189	nat10	93	67.204	Esox_lucius
ENSCING00000003567	-	99	64.943	ENSFCAG00000002028	NAT10	92	65.047	Felis_catus
ENSCING00000003567	-	99	65.078	ENSFALG00000001264	NAT10	90	65.078	Ficedula_albicollis
ENSCING00000003567	-	100	64.124	ENSFDAG00000010525	NAT10	92	64.227	Fukomys_damarensis
ENSCING00000003567	-	100	66.736	ENSFHEG00000009197	NAT10	91	66.736	Fundulus_heteroclitus
ENSCING00000003567	-	100	64.456	ENSGMOG00000002783	nat10	92	64.456	Gadus_morhua
ENSCING00000003567	-	99	65.528	ENSGALG00000014573	NAT10	93	65.631	Gallus_gallus
ENSCING00000003567	-	100	65.253	ENSGACG00000009849	nat10	92	65.357	Gasterosteus_aculeatus
ENSCING00000003567	-	99	65.768	ENSGAGG00000002160	NAT10	90	68.231	Gopherus_agassizii
ENSCING00000003567	-	99	65.114	ENSGGOG00000014560	NAT10	92	65.357	Gorilla_gorilla
ENSCING00000003567	-	100	66.667	ENSHBUG00000003769	nat10	93	67.092	Haplochromis_burtoni
ENSCING00000003567	-	100	64.219	ENSHGLG00000016891	NAT10	92	64.323	Heterocephalus_glaber_female
ENSCING00000003567	-	100	64.219	ENSHGLG00100016949	NAT10	92	64.323	Heterocephalus_glaber_male
ENSCING00000003567	-	100	67.322	ENSHCOG00000016765	nat10	91	67.322	Hippocampus_comes
ENSCING00000003567	-	99	65.114	ENSSTOG00000001817	-	92	65.357	Ictidomys_tridecemlineatus
ENSCING00000003567	-	99	64.536	ENSJJAG00000023042	Nat10	92	64.639	Jaculus_jaculus
ENSCING00000003567	-	100	66.977	ENSKMAG00000001467	nat10	91	66.977	Kryptolebias_marmoratus
ENSCING00000003567	-	100	65.942	ENSLBEG00000013233	nat10	91	66.046	Labrus_bergylta
ENSCING00000003567	-	99	65.222	ENSLACG00000004636	NAT10	92	65.325	Latimeria_chalumnae
ENSCING00000003567	-	99	66.387	ENSLOCG00000002896	nat10	94	66.597	Lepisosteus_oculatus
ENSCING00000003567	-	99	64.876	ENSLAFG00000012393	NAT10	92	65.186	Loxodonta_africana
ENSCING00000003567	-	99	65.150	ENSMFAG00000041013	NAT10	92	65.253	Macaca_fascicularis
ENSCING00000003567	-	99	65.010	ENSMMUG00000021646	NAT10	90	67.986	Macaca_mulatta
ENSCING00000003567	-	99	64.803	ENSMNEG00000041284	NAT10	92	65.047	Macaca_nemestrina
ENSCING00000003567	-	99	61.905	ENSMLEG00000017199	NAT10	92	62.151	Mandrillus_leucophaeus
ENSCING00000003567	-	100	66.632	ENSMAMG00000000316	nat10	91	66.736	Mastacembelus_armatus
ENSCING00000003567	-	100	66.563	ENSMZEG00005004998	nat10	93	65.817	Maylandia_zebra
ENSCING00000003567	-	96	65.775	ENSMGAG00000010206	NAT10	92	65.882	Meleagris_gallopavo
ENSCING00000003567	-	81	61.450	ENSMAUG00000010653	-	95	61.364	Mesocricetus_auratus
ENSCING00000003567	-	99	62.860	ENSMICG00000003627	NAT10	95	62.515	Microcebus_murinus
ENSCING00000003567	-	99	64.700	ENSMOCG00000021454	Nat10	92	64.803	Microtus_ochrogaster
ENSCING00000003567	-	89	64.550	ENSMMOG00000012266	nat10	95	65.127	Mola_mola
ENSCING00000003567	-	99	66.149	ENSMODG00000009890	NAT10	92	66.149	Monodelphis_domestica
ENSCING00000003567	-	100	65.635	ENSMALG00000008766	nat10	91	65.635	Monopterus_albus
ENSCING00000003567	-	99	64.907	ENSMUSG00000027185	Nat10	92	65.150	Mus_musculus
ENSCING00000003567	-	99	64.493	MGP_PahariEiJ_G0025454	Nat10	92	64.736	Mus_pahari
ENSCING00000003567	-	99	65.010	MGP_SPRETEiJ_G0024928	Nat10	92	65.150	Mus_spretus
ENSCING00000003567	-	99	65.155	ENSMPUG00000011636	NAT10	92	65.258	Mustela_putorius_furo
ENSCING00000003567	-	99	64.190	ENSMLUG00000016473	NAT10	92	64.536	Myotis_lucifugus
ENSCING00000003567	-	99	64.767	ENSNGAG00000013486	Nat10	92	65.181	Nannospalax_galili
ENSCING00000003567	-	100	66.770	ENSNBRG00000002262	nat10	92	66.770	Neolamprologus_brichardi
ENSCING00000003567	-	99	64.803	ENSNLEG00000017916	NAT10	95	63.113	Nomascus_leucogenys
ENSCING00000003567	-	74	72.559	ENSMEUG00000012722	-	74	72.559	Notamacropus_eugenii
ENSCING00000003567	-	99	64.700	ENSOPRG00000009758	NAT10	96	64.803	Ochotona_princeps
ENSCING00000003567	-	100	64.948	ENSODEG00000017069	NAT10	92	65.052	Octodon_degus
ENSCING00000003567	-	100	66.460	ENSONIG00000008445	nat10	91	66.460	Oreochromis_niloticus
ENSCING00000003567	-	99	66.322	ENSOANG00000007400	-	96	66.632	Ornithorhynchus_anatinus
ENSCING00000003567	-	99	65.217	ENSOCUG00000001398	NAT10	96	65.460	Oryctolagus_cuniculus
ENSCING00000003567	-	100	66.632	ENSORLG00000004830	nat10	91	66.632	Oryzias_latipes
ENSCING00000003567	-	100	66.529	ENSORLG00020012458	nat10	91	66.529	Oryzias_latipes_hni
ENSCING00000003567	-	100	66.219	ENSORLG00015005731	nat10	91	66.219	Oryzias_latipes_hsok
ENSCING00000003567	-	100	66.942	ENSOMEG00000013901	nat10	94	67.050	Oryzias_melastigma
ENSCING00000003567	-	99	64.603	ENSOGAG00000016737	NAT10	92	64.845	Otolemur_garnettii
ENSCING00000003567	-	99	65.052	ENSOARG00000018290	NAT10	92	65.155	Ovis_aries
ENSCING00000003567	-	99	65.010	ENSPPAG00000036069	NAT10	92	65.253	Pan_paniscus
ENSCING00000003567	-	99	64.943	ENSPPRG00000010254	NAT10	92	65.047	Panthera_pardus
ENSCING00000003567	-	99	64.943	ENSPTIG00000010705	NAT10	92	65.047	Panthera_tigris_altaica
ENSCING00000003567	-	99	65.010	ENSPTRG00000003494	NAT10	92	65.253	Pan_troglodytes
ENSCING00000003567	-	99	64.803	ENSPANG00000013723	NAT10	92	65.047	Papio_anubis
ENSCING00000003567	-	99	65.973	ENSPKIG00000004093	nat10	93	65.738	Paramormyrops_kingsleyae
ENSCING00000003567	-	99	66.494	ENSPSIG00000006469	NAT10	93	66.598	Pelodiscus_sinensis
ENSCING00000003567	-	99	64.803	ENSPEMG00000009451	Nat10	92	65.424	Peromyscus_maniculatus_bairdii
ENSCING00000003567	-	99	66.014	ENSPMAG00000003621	nat10	92	66.117	Petromyzon_marinus
ENSCING00000003567	-	99	65.841	ENSPCIG00000026378	NAT10	92	65.841	Phascolarctos_cinereus
ENSCING00000003567	-	100	66.736	ENSPFOG00000012532	nat10	92	66.736	Poecilia_formosa
ENSCING00000003567	-	100	66.736	ENSPLAG00000014361	nat10	92	66.736	Poecilia_latipinna
ENSCING00000003567	-	100	66.736	ENSPMEG00000003182	nat10	92	66.736	Poecilia_mexicana
ENSCING00000003567	-	96	64.579	ENSPREG00000016112	nat10	93	64.579	Poecilia_reticulata
ENSCING00000003567	-	95	56.522	ENSPCAG00000004327	NAT10	91	56.678	Procavia_capensis
ENSCING00000003567	-	99	64.493	ENSPCOG00000009633	NAT10	92	64.736	Propithecus_coquereli
ENSCING00000003567	-	92	71.177	ENSPVAG00000005560	NAT10	85	71.486	Pteropus_vampyrus
ENSCING00000003567	-	100	66.667	ENSPNYG00000021872	nat10	89	68.750	Pundamilia_nyererei
ENSCING00000003567	-	100	66.529	ENSPNAG00000019299	nat10	92	66.529	Pygocentrus_nattereri
ENSCING00000003567	-	99	64.286	ENSRNOG00000008663	Nat10	90	67.506	Rattus_norvegicus
ENSCING00000003567	-	99	65.010	ENSRBIG00000028922	NAT10	92	65.253	Rhinopithecus_bieti
ENSCING00000003567	-	99	65.010	ENSRROG00000011811	NAT10	92	65.253	Rhinopithecus_roxellana
ENSCING00000003567	-	99	54.673	YNL132W	-	93	54.673	Saccharomyces_cerevisiae
ENSCING00000003567	-	99	64.803	ENSSBOG00000023643	NAT10	92	65.150	Saimiri_boliviensis_boliviensis
ENSCING00000003567	-	96	66.131	ENSSHAG00000003443	NAT10	99	65.946	Sarcophilus_harrisii
ENSCING00000003567	-	100	66.357	ENSSFOG00015015371	nat10	93	66.460	Scleropages_formosus
ENSCING00000003567	-	100	66.149	ENSSMAG00000010588	nat10	91	66.253	Scophthalmus_maximus
ENSCING00000003567	-	100	66.563	ENSSDUG00000021879	nat10	91	66.667	Seriola_dumerili
ENSCING00000003567	-	100	66.563	ENSSLDG00000005278	nat10	89	68.750	Seriola_lalandi_dorsalis
ENSCING00000003567	-	69	80.508	ENSSARG00000013457	NAT10	83	80.508	Sorex_araneus
ENSCING00000003567	-	99	65.150	ENSSPUG00000010599	-	93	65.357	Sphenodon_punctatus
ENSCING00000003567	-	100	66.770	ENSSPAG00000013867	nat10	91	66.770	Stegastes_partitus
ENSCING00000003567	-	99	65.010	ENSSSCG00000013304	NAT10	97	67.505	Sus_scrofa
ENSCING00000003567	-	99	65.321	ENSTGUG00000005638	-	93	65.424	Taeniopygia_guttata
ENSCING00000003567	-	100	66.425	ENSTRUG00000017064	nat10	91	66.528	Takifugu_rubripes
ENSCING00000003567	-	100	66.287	ENSTNIG00000016044	nat10	91	66.391	Tetraodon_nigroviridis
ENSCING00000003567	-	83	78.689	ENSTBEG00000010311	NAT10	79	78.689	Tupaia_belangeri
ENSCING00000003567	-	92	61.898	ENSTTRG00000007748	NAT10	85	62.465	Tursiops_truncatus
ENSCING00000003567	-	99	65.052	ENSUAMG00000010017	NAT10	96	63.497	Ursus_americanus
ENSCING00000003567	-	99	65.052	ENSUMAG00000018144	NAT10	92	65.155	Ursus_maritimus
ENSCING00000003567	-	94	78.049	ENSVVUG00000010185	NAT10	95	78.049	Vulpes_vulpes
ENSCING00000003567	-	99	65.909	ENSXETG00000003782	nat10	92	65.909	Xenopus_tropicalis
ENSCING00000003567	-	86	68.712	ENSXCOG00000016365	nat10	89	68.833	Xiphophorus_couchianus
ENSCING00000003567	-	100	66.528	ENSXMAG00000007325	nat10	92	66.632	Xiphophorus_maculatus