EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCING00000003597 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_intestinalis
Status
putative
Strand
Plus strand
Length
13975 bases
Position
chr3:3899971-3913945
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCINP00000007408HA2PF04408.232.5e-2011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCINT00000007408-3468-ENSCINP000000074081131 (aa)-F6UYA6
Gene Model
Click here to download ENSCING00000003597's gene model file
Pathways
Pathway IDPathway NameSource
cin03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000003597's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCING00000003597-9863.206ENSG00000140829DHX389762.756Homo_sapiens
ENSCING00000003597-9862.024ENSAPOG00000010788dhx389862.591Acanthochromis_polyacanthus
ENSCING00000003597-9861.979ENSAMEG00000002227DHX389762.787Ailuropoda_melanoleuca
ENSCING00000003597-9862.764ENSACIG00000000573dhx389863.008Amphilophus_citrinellus
ENSCING00000003597-9863.391ENSAOCG00000007610dhx389863.063Amphiprion_ocellaris
ENSCING00000003597-7958.932ENSAOCG00000013483-9859.612Amphiprion_ocellaris
ENSCING00000003597-9861.613ENSAPEG00000011410dhx389862.177Amphiprion_percula
ENSCING00000003597-9765.860ENSATEG00000004692dhx389366.278Anabas_testudineus
ENSCING00000003597-9165.530ENSAPLG00000015279DHX389766.007Anas_platyrhynchos
ENSCING00000003597-9558.878ENSACAG00000008115DHX389759.362Anolis_carolinensis
ENSCING00000003597-9863.311ENSANAG00000022259DHX389762.777Aotus_nancymaae
ENSCING00000003597-9862.035ENSACLG00000001837dhx389761.672Astatotilapia_calliptera
ENSCING00000003597-9862.366ENSAMXG00000004396dhx389466.152Astyanax_mexicanus
ENSCING00000003597-9862.129ENSBTAG00000013265DHX389762.923Bos_taurus
ENSCING00000003597-9958.239WBGene00003389mog-19958.772Caenorhabditis_elegans
ENSCING00000003597-9863.311ENSCJAG00000015103DHX389961.509Callithrix_jacchus
ENSCING00000003597-9862.325ENSCAFG00000020228DHX389762.777Canis_familiaris
ENSCING00000003597-9862.026ENSCAFG00020020392DHX389762.479Canis_lupus_dingo
ENSCING00000003597-9862.211ENSCHIG00000027105DHX389763.171Capra_hircus
ENSCING00000003597-9762.819ENSTSYG00000012023DHX389763.232Carlito_syrichta
ENSCING00000003597-9861.878ENSCAPG00000016032DHX389762.235Cavia_aperea
ENSCING00000003597-9862.449ENSCPOG00000013965DHX389662.777Cavia_porcellus
ENSCING00000003597-9863.409ENSCCAG00000031157DHX389762.871Cebus_capucinus
ENSCING00000003597-9858.706ENSCATG00000036889DHX389758.361Cercocebus_atys
ENSCING00000003597-9863.009ENSCLAG00000008250DHX389763.206Chinchilla_lanigera
ENSCING00000003597-9863.372ENSCSAG00000004218DHX389762.920Chlorocebus_sabaeus
ENSCING00000003597-5180.584ENSCHOG00000009444-9674.732Choloepus_hoffmanni
ENSCING00000003597-9563.286ENSCPBG00000027010DHX389763.344Chrysemys_picta_bellii
ENSCING00000003597-9882.273ENSCSAVG00000001117-10094.929Ciona_savignyi
ENSCING00000003597-9863.553ENSCANG00000039299DHX389762.932Colobus_angolensis_palliatus
ENSCING00000003597-9862.644ENSCGRG00001021542Dhx389762.808Cricetulus_griseus_chok1gshd
ENSCING00000003597-9862.644ENSCGRG00000017386Dhx389762.808Cricetulus_griseus_crigri
ENSCING00000003597-9863.333ENSCSEG00000008437dhx389861.731Cynoglossus_semilaevis
ENSCING00000003597-9763.175ENSCVAG00000023150dhx389762.766Cyprinodon_variegatus
ENSCING00000003597-9862.419ENSDARG00000100013dhx389861.650Danio_rerio
ENSCING00000003597-9862.562ENSDNOG00000006717DHX389763.045Dasypus_novemcinctus
ENSCING00000003597-9862.541ENSDORG00000005226Dhx389762.951Dipodomys_ordii
ENSCING00000003597-8764.617FBgn0026713l(1)G00079472.222Drosophila_melanogaster
ENSCING00000003597-5281.591ENSETEG00000014663-5281.591Echinops_telfairi
ENSCING00000003597-9762.850ENSEBUG00000005875dhx389662.765Eptatretus_burgeri
ENSCING00000003597-9861.998ENSEASG00005013249DHX389963.027Equus_asinus_asinus
ENSCING00000003597-9376.258ENSECAG00000000526DHX389663.110Equus_caballus
ENSCING00000003597-9759.700ENSELUG00000014379dhx389759.950Esox_lucius
ENSCING00000003597-9862.162ENSFCAG00000005831DHX389762.942Felis_catus
ENSCING00000003597-9561.296ENSFALG00000002671DHX389761.595Ficedula_albicollis
ENSCING00000003597-9863.062ENSFDAG00000015601DHX389763.311Fukomys_damarensis
ENSCING00000003597-9863.529ENSFHEG00000006031dhx389764.601Fundulus_heteroclitus
ENSCING00000003597-9762.295ENSGMOG00000002840dhx389465.539Gadus_morhua
ENSCING00000003597-9561.610ENSGALG00000000787DHX389862.273Gallus_gallus
ENSCING00000003597-9762.866ENSGAFG00000017271dhx389762.459Gambusia_affinis
ENSCING00000003597-9763.102ENSGACG00000015776dhx389762.612Gasterosteus_aculeatus
ENSCING00000003597-9562.793ENSGAGG00000015601DHX389763.262Gopherus_agassizii
ENSCING00000003597-9863.206ENSGGOG00000013052DHX389762.756Gorilla_gorilla
ENSCING00000003597-9864.903ENSHBUG00000013363dhx389565.697Haplochromis_burtoni
ENSCING00000003597-9863.031ENSHGLG00000013308DHX389763.281Heterocephalus_glaber_female
ENSCING00000003597-9862.365ENSHGLG00100015625DHX389762.614Heterocephalus_glaber_male
ENSCING00000003597-9762.346ENSHCOG00000003102dhx389766.126Hippocampus_comes
ENSCING00000003597-9867.942ENSIPUG00000006233DHX389766.696Ictalurus_punctatus
ENSCING00000003597-9862.346ENSSTOG00000000534DHX389762.756Ictidomys_tridecemlineatus
ENSCING00000003597-9076.107ENSJJAG00000015149Dhx389676.107Jaculus_jaculus
ENSCING00000003597-9862.348ENSKMAG00000006694dhx389862.267Kryptolebias_marmoratus
ENSCING00000003597-9367.030ENSLBEG00000026364dhx389366.939Labrus_bergylta
ENSCING00000003597-9759.091ENSLACG00000013007DHX389760.083Latimeria_chalumnae
ENSCING00000003597-9862.541ENSLOCG00000004169dhx389862.368Lepisosteus_oculatus
ENSCING00000003597-9863.478ENSLAFG00000016360DHX389763.621Loxodonta_africana
ENSCING00000003597-9863.372ENSMFAG00000031852DHX389762.920Macaca_fascicularis
ENSCING00000003597-9863.289ENSMMUG00000000677DHX389762.838Macaca_mulatta
ENSCING00000003597-9863.372ENSMNEG00000045083DHX389762.920Macaca_nemestrina
ENSCING00000003597-9863.372ENSMLEG00000029417DHX389762.920Mandrillus_leucophaeus
ENSCING00000003597-9865.079ENSMAMG00000021512dhx389861.563Mastacembelus_armatus
ENSCING00000003597-9860.276ENSMZEG00005014283dhx389860.845Maylandia_zebra
ENSCING00000003597-9065.517ENSMGAG00000008791DHX389766.245Meleagris_gallopavo
ENSCING00000003597-8768.390ENSMAUG00000006330Dhx389769.041Mesocricetus_auratus
ENSCING00000003597-9862.510ENSMICG00000011402DHX389762.920Microcebus_murinus
ENSCING00000003597-9861.849ENSMOCG00000016798Dhx389762.804Microtus_ochrogaster
ENSCING00000003597-9864.487ENSMMOG00000016558dhx389864.156Mola_mola
ENSCING00000003597-9862.798ENSMODG00000002549DHX389762.789Monodelphis_domestica
ENSCING00000003597-9866.076ENSMALG00000021005dhx389366.076Monopterus_albus
ENSCING00000003597-9862.789MGP_CAROLIEiJ_G0031541Dhx389763.289Mus_caroli
ENSCING00000003597-9862.789ENSMUSG00000037993Dhx389763.289Mus_musculus
ENSCING00000003597-9863.123MGP_PahariEiJ_G0023141Dhx389763.123Mus_pahari
ENSCING00000003597-9862.789MGP_SPRETEiJ_G0032659Dhx389763.289Mus_spretus
ENSCING00000003597-9862.325ENSMPUG00000007766DHX389762.942Mustela_putorius_furo
ENSCING00000003597-9863.636ENSMLUG00000013866DHX389763.810Myotis_lucifugus
ENSCING00000003597-9863.259ENSNGAG00000014084Dhx389763.674Nannospalax_galili
ENSCING00000003597-9860.934ENSNBRG00000010899dhx389761.097Neolamprologus_brichardi
ENSCING00000003597-9863.476ENSNLEG00000005630DHX389763.162Nomascus_leucogenys
ENSCING00000003597-5774.889ENSMEUG00000007747-6974.889Notamacropus_eugenii
ENSCING00000003597-9759.153ENSOPRG00000012142-9759.322Ochotona_princeps
ENSCING00000003597-9862.261ENSOPRG00000001884DHX389862.594Ochotona_princeps
ENSCING00000003597-9862.418ENSODEG00000015472DHX389762.664Octodon_degus
ENSCING00000003597-9861.724ENSONIG00000005916dhx389862.450Oreochromis_niloticus
ENSCING00000003597-9863.062ENSOCUG00000009067DHX389763.394Oryctolagus_cuniculus
ENSCING00000003597-9762.724ENSORLG00000007853dhx389762.561Oryzias_latipes
ENSCING00000003597-9762.643ENSORLG00020009844dhx389762.561Oryzias_latipes_hni
ENSCING00000003597-9762.643ENSORLG00015007999dhx389762.561Oryzias_latipes_hsok
ENSCING00000003597-9762.745ENSOMEG00000001782dhx389762.582Oryzias_melastigma
ENSCING00000003597-9762.850ENSOGAG00000008658DHX389763.262Otolemur_garnettii
ENSCING00000003597-9860.082ENSOARG00000003723DHX389760.723Ovis_aries
ENSCING00000003597-9863.406ENSPPAG00000042488DHX389762.756Pan_paniscus
ENSCING00000003597-9862.162ENSPPRG00000008930DHX389762.942Panthera_pardus
ENSCING00000003597-9862.162ENSPTIG00000017274DHX389762.942Panthera_tigris_altaica
ENSCING00000003597-9863.406ENSPTRG00000008338DHX389762.756Pan_troglodytes
ENSCING00000003597-9863.372ENSPANG00000022057DHX389762.920Papio_anubis
ENSCING00000003597-9862.766ENSPKIG00000009708dhx389466.338Paramormyrops_kingsleyae
ENSCING00000003597-9365.730ENSPMGG00000006063dhx389762.573Periophthalmus_magnuspinnatus
ENSCING00000003597-9862.377ENSPEMG00000008011Dhx389762.705Peromyscus_maniculatus_bairdii
ENSCING00000003597-9862.541ENSPCIG00000001712DHX389962.871Phascolarctos_cinereus
ENSCING00000003597-9762.368ENSPFOG00000001246dhx389762.287Poecilia_formosa
ENSCING00000003597-9763.391ENSPLAG00000004022dhx389762.541Poecilia_latipinna
ENSCING00000003597-9763.309ENSPMEG00000015475dhx389762.459Poecilia_mexicana
ENSCING00000003597-9764.745ENSPREG00000023207dhx389763.870Poecilia_reticulata
ENSCING00000003597-9862.822ENSPPYG00000007515DHX389762.905Pongo_abelii
ENSCING00000003597-8076.579ENSPCAG00000010592DHX388772.323Procavia_capensis
ENSCING00000003597-9862.592ENSPCOG00000027770DHX389763.002Propithecus_coquereli
ENSCING00000003597-9365.233ENSPVAG00000010259DHX389566.456Pteropus_vampyrus
ENSCING00000003597-9864.185ENSPNYG00000013335dhx389763.825Pundamilia_nyererei
ENSCING00000003597-9867.117ENSPNAG00000004859dhx389863.443Pygocentrus_nattereri
ENSCING00000003597-9863.049ENSRNOG00000014619Dhx389763.071Rattus_norvegicus
ENSCING00000003597-9864.304ENSRBIG00000025475DHX389763.823Rhinopithecus_bieti
ENSCING00000003597-9863.372ENSRROG00000028630DHX389762.920Rhinopithecus_roxellana
ENSCING00000003597-6451.220YKR086WPRP166851.220Saccharomyces_cerevisiae
ENSCING00000003597-9863.027ENSSBOG00000021842DHX389762.777Saimiri_boliviensis_boliviensis
ENSCING00000003597-9059.484ENSSHAG00000016871DHX389757.273Sarcophilus_harrisii
ENSCING00000003597-9865.422ENSSFOG00015014930dhx389365.778Scleropages_formosus
ENSCING00000003597-9862.145ENSSMAG00000000095dhx389465.986Scophthalmus_maximus
ENSCING00000003597-9863.711ENSSDUG00000001413dhx389962.560Seriola_dumerili
ENSCING00000003597-9860.741ENSSLDG00000021050dhx389760.115Seriola_lalandi_dorsalis
ENSCING00000003597-9863.509ENSSPAG00000020537dhx389863.097Stegastes_partitus
ENSCING00000003597-9876.398ENSSSCG00000002748DHX389076.398Sus_scrofa
ENSCING00000003597-9560.693ENSTGUG00000008196DHX389859.836Taeniopygia_guttata
ENSCING00000003597-9863.184ENSTRUG00000017588dhx389863.020Takifugu_rubripes
ENSCING00000003597-9863.067ENSTNIG00000009345dhx389762.819Tetraodon_nigroviridis
ENSCING00000003597-9855.004ENSTBEG00000001426DHX389755.795Tupaia_belangeri
ENSCING00000003597-9562.799ENSTTRG00000001914DHX388875.939Tursiops_truncatus
ENSCING00000003597-9862.336ENSUAMG00000020435DHX389762.951Ursus_americanus
ENSCING00000003597-9863.277ENSUMAG00000018189DHX389763.766Ursus_maritimus
ENSCING00000003597-9862.325ENSVVUG00000017474DHX389762.777Vulpes_vulpes
ENSCING00000003597-9763.219ENSXETG00000023447dhx389963.849Xenopus_tropicalis
ENSCING00000003597-9863.347ENSXCOG00000011321dhx389862.939Xiphophorus_couchianus
ENSCING00000003597-9862.621ENSXMAG00000003292dhx389862.217Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us