EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000003620 (Gene tree)
Gene ID: 100182767
Gene Symbol: -
Alias: -
Full Name: eukaryotic translation initiation factor 3 subunit B-like
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 8921 bases
Position: chr3:3940787-3949707
Accession: 100182767
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000007461	RRM_1	PF00076.22	6.4e-08	1	1
ENSCINP00000007461	eIF2A	PF08662.11	7.4e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000007461	-	2763	XM_002130001	ENSCINP00000007461	700 (aa)	XP_002130037	F6U8C7

Gene Model

Click here to download ENSCING00000003620's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000003620's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000003620	-	96	60.503	ENSG00000106263	EIF3B	99	63.399	Homo_sapiens
ENSCING00000003620	-	95	60.629	ENSAPOG00000002297	eif3bb	96	61.094	Acanthochromis_polyacanthus
ENSCING00000003620	-	95	60.479	ENSACIG00000015396	eif3bb	96	60.942	Amphilophus_citrinellus
ENSCING00000003620	-	95	60.329	ENSAOCG00000010921	eif3bb	96	60.790	Amphiprion_ocellaris
ENSCING00000003620	-	95	60.479	ENSAPEG00000000844	eif3bb	96	60.942	Amphiprion_percula
ENSCING00000003620	-	95	59.880	ENSATEG00000008626	eif3bb	96	60.334	Anabas_testudineus
ENSCING00000003620	-	93	61.009	ENSAPLG00000016062	EIF3B	98	61.502	Anas_platyrhynchos
ENSCING00000003620	-	94	60.152	ENSACAG00000008874	-	73	60.030	Anolis_carolinensis
ENSCING00000003620	-	96	60.503	ENSANAG00000020360	EIF3B	81	61.120	Aotus_nancymaae
ENSCING00000003620	-	92	59.351	ENSACLG00000000870	eif3bb	96	60.030	Astatotilapia_calliptera
ENSCING00000003620	-	96	60.299	ENSAMXG00000009773	eif3ba	96	60.731	Astyanax_mexicanus
ENSCING00000003620	-	96	60.503	ENSBTAG00000007474	EIF3B	83	61.120	Bos_taurus
ENSCING00000003620	-	96	32.682	WBGene00001225	eif-3.B	96	33.142	Caenorhabditis_elegans
ENSCING00000003620	-	96	60.503	ENSCJAG00000001442	EIF3B	81	61.120	Callithrix_jacchus
ENSCING00000003620	-	96	60.448	ENSCAFG00000016418	EIF3B	81	60.817	Canis_familiaris
ENSCING00000003620	-	96	58.507	ENSCAFG00020020771	EIF3B	83	58.850	Canis_lupus_dingo
ENSCING00000003620	-	96	60.355	ENSCHIG00000009941	EIF3B	83	60.968	Capra_hircus
ENSCING00000003620	-	96	58.271	ENSTSYG00000008256	EIF3B	97	58.308	Carlito_syrichta
ENSCING00000003620	-	90	53.006	ENSCAPG00000006394	-	94	54.167	Cavia_aperea
ENSCING00000003620	-	93	57.034	ENSCAPG00000009347	-	96	57.590	Cavia_aperea
ENSCING00000003620	-	97	60.352	ENSCPOG00000012541	-	83	60.961	Cavia_porcellus
ENSCING00000003620	-	97	60.499	ENSCPOG00000031410	-	83	61.111	Cavia_porcellus
ENSCING00000003620	-	96	60.503	ENSCCAG00000021556	EIF3B	93	59.756	Cebus_capucinus
ENSCING00000003620	-	96	60.503	ENSCATG00000040107	EIF3B	80	61.120	Cercocebus_atys
ENSCING00000003620	-	97	60.499	ENSCLAG00000006140	EIF3B	83	61.111	Chinchilla_lanigera
ENSCING00000003620	-	96	55.178	ENSCSAG00000017603	EIF3B	80	55.825	Chlorocebus_sabaeus
ENSCING00000003620	-	50	62.687	ENSCHOG00000006142	-	57	62.687	Choloepus_hoffmanni
ENSCING00000003620	-	95	60.928	ENSCPBG00000020654	EIF3B	85	60.296	Chrysemys_picta_bellii
ENSCING00000003620	-	96	60.503	ENSCANG00000042097	EIF3B	95	61.120	Colobus_angolensis_palliatus
ENSCING00000003620	-	96	60.651	ENSCGRG00001019278	Eif3b	82	61.271	Cricetulus_griseus_chok1gshd
ENSCING00000003620	-	96	60.651	ENSCGRG00000004618	Eif3b	82	61.271	Cricetulus_griseus_crigri
ENSCING00000003620	-	95	60.030	ENSCSEG00000020931	eif3bb	96	60.486	Cynoglossus_semilaevis
ENSCING00000003620	-	92	60.587	ENSCVAG00000015650	eif3bb	96	61.246	Cyprinodon_variegatus
ENSCING00000003620	-	96	60.060	ENSDARG00000059654	eif3ba	96	60.486	Danio_rerio
ENSCING00000003620	-	96	59.733	ENSDARG00000074213	eif3bb	98	60.030	Danio_rerio
ENSCING00000003620	-	96	60.207	ENSDNOG00000049572	EIF3B	80	60.633	Dasypus_novemcinctus
ENSCING00000003620	-	97	58.198	ENSDORG00000001401	Eif3b	83	58.761	Dipodomys_ordii
ENSCING00000003620	-	95	46.277	FBgn0034237	eIF3b	96	46.142	Drosophila_melanogaster
ENSCING00000003620	-	92	58.760	ENSETEG00000001719	EIF3B	97	58.934	Echinops_telfairi
ENSCING00000003620	-	95	60.241	ENSEBUG00000004379	eif3bb	94	60.455	Eptatretus_burgeri
ENSCING00000003620	-	96	60.207	ENSEASG00005021167	EIF3B	82	60.817	Equus_asinus_asinus
ENSCING00000003620	-	96	60.207	ENSECAG00000013671	EIF3B	82	60.817	Equus_caballus
ENSCING00000003620	-	82	57.000	ENSEEUG00000014359	EIF3B	86	57.000	Erinaceus_europaeus
ENSCING00000003620	-	95	59.435	ENSELUG00000021762	eif3bb	96	59.459	Esox_lucius
ENSCING00000003620	-	96	60.503	ENSFCAG00000005392	EIF3B	81	61.120	Felis_catus
ENSCING00000003620	-	96	61.012	ENSFALG00000013907	EIF3B	91	61.550	Ficedula_albicollis
ENSCING00000003620	-	96	60.651	ENSFDAG00000007558	EIF3B	84	61.271	Fukomys_damarensis
ENSCING00000003620	-	92	60.093	ENSFHEG00000002563	eif3bb	96	60.638	Fundulus_heteroclitus
ENSCING00000003620	-	96	56.805	ENSGMOG00000006100	eif3bb	96	57.014	Gadus_morhua
ENSCING00000003620	-	96	60.773	ENSGALG00000040999	EIF3B	81	61.246	Gallus_gallus
ENSCING00000003620	-	52	58.242	ENSGAFG00000004114	eif3bb	87	58.242	Gambusia_affinis
ENSCING00000003620	-	96	59.145	ENSGACG00000016738	eif3bb	96	59.398	Gasterosteus_aculeatus
ENSCING00000003620	-	96	60.475	ENSGAGG00000003659	EIF3B	82	61.094	Gopherus_agassizii
ENSCING00000003620	-	69	58.045	ENSGGOG00000016291	EIF3B	71	58.824	Gorilla_gorilla
ENSCING00000003620	-	92	59.351	ENSHBUG00000019329	eif3bb	96	60.030	Haplochromis_burtoni
ENSCING00000003620	-	96	60.207	ENSHGLG00000015253	EIF3B	83	60.817	Heterocephalus_glaber_female
ENSCING00000003620	-	96	60.207	ENSHGLG00100015005	EIF3B	84	60.817	Heterocephalus_glaber_male
ENSCING00000003620	-	93	59.356	ENSHCOG00000020583	eif3bb	96	60.152	Hippocampus_comes
ENSCING00000003620	-	96	60.896	ENSIPUG00000018347	eif3b	96	61.187	Ictalurus_punctatus
ENSCING00000003620	-	96	60.799	ENSSTOG00000021545	EIF3B	91	61.422	Ictidomys_tridecemlineatus
ENSCING00000003620	-	98	59.942	ENSJJAG00000014658	Eif3b	84	60.534	Jaculus_jaculus
ENSCING00000003620	-	92	60.433	ENSKMAG00000007432	eif3bb	96	60.790	Kryptolebias_marmoratus
ENSCING00000003620	-	95	60.329	ENSLBEG00000005233	eif3bb	96	60.790	Labrus_bergylta
ENSCING00000003620	-	96	59.970	ENSLACG00000010357	EIF3B	95	60.426	Latimeria_chalumnae
ENSCING00000003620	-	95	60.511	ENSLOCG00000004215	eif3bb	95	61.035	Lepisosteus_oculatus
ENSCING00000003620	-	96	59.970	ENSLAFG00000001540	EIF3B	84	60.574	Loxodonta_africana
ENSCING00000003620	-	96	60.503	ENSMFAG00000046100	EIF3B	85	61.120	Macaca_fascicularis
ENSCING00000003620	-	96	59.971	ENSMMUG00000015529	EIF3B	81	60.570	Macaca_mulatta
ENSCING00000003620	-	96	60.503	ENSMNEG00000042021	EIF3B	80	61.120	Macaca_nemestrina
ENSCING00000003620	-	96	60.503	ENSMLEG00000042295	EIF3B	97	61.120	Mandrillus_leucophaeus
ENSCING00000003620	-	95	60.180	ENSMAMG00000008654	eif3bb	96	60.638	Mastacembelus_armatus
ENSCING00000003620	-	92	59.351	ENSMZEG00005011827	eif3bb	96	60.030	Maylandia_zebra
ENSCING00000003620	-	93	61.009	ENSMGAG00000002719	EIF3B	98	61.502	Meleagris_gallopavo
ENSCING00000003620	-	96	60.651	ENSMAUG00000020259	Eif3b	83	61.271	Mesocricetus_auratus
ENSCING00000003620	-	96	60.651	ENSMICG00000010103	EIF3B	81	61.086	Microcebus_murinus
ENSCING00000003620	-	96	60.799	ENSMOCG00000000390	Eif3b	82	61.422	Microtus_ochrogaster
ENSCING00000003620	-	95	60.329	ENSMMOG00000003655	eif3bb	96	60.790	Mola_mola
ENSCING00000003620	-	96	60.207	ENSMODG00000009778	EIF3B	78	60.817	Monodelphis_domestica
ENSCING00000003620	-	95	55.965	ENSMALG00000002494	eif3bb	97	56.353	Monopterus_albus
ENSCING00000003620	-	96	60.651	MGP_CAROLIEiJ_G0027948	Eif3b	91	57.233	Mus_caroli
ENSCING00000003620	-	96	60.651	ENSMUSG00000056076	Eif3b	91	57.233	Mus_musculus
ENSCING00000003620	-	96	60.651	MGP_PahariEiJ_G0024520	Eif3b	91	57.233	Mus_pahari
ENSCING00000003620	-	96	60.651	MGP_SPRETEiJ_G0028952	Eif3b	91	57.233	Mus_spretus
ENSCING00000003620	-	93	60.305	ENSMPUG00000017919	EIF3B	96	60.938	Mustela_putorius_furo
ENSCING00000003620	-	96	60.857	ENSMLUG00000013740	EIF3B	96	61.480	Myotis_lucifugus
ENSCING00000003620	-	96	60.651	ENSNGAG00000016188	Eif3b	83	61.271	Nannospalax_galili
ENSCING00000003620	-	76	64.286	ENSNBRG00000008582	eif3bb	95	64.530	Neolamprologus_brichardi
ENSCING00000003620	-	96	55.391	ENSNLEG00000008647	EIF3B	81	55.891	Nomascus_leucogenys
ENSCING00000003620	-	72	63.900	ENSMEUG00000000880	EIF3B	68	63.900	Notamacropus_eugenii
ENSCING00000003620	-	92	57.519	ENSOPRG00000014504	EIF3B	97	57.680	Ochotona_princeps
ENSCING00000003620	-	97	55.000	ENSODEG00000012851	EIF3B	82	55.489	Octodon_degus
ENSCING00000003620	-	92	59.815	ENSONIG00000003283	eif3bb	96	60.486	Oreochromis_niloticus
ENSCING00000003620	-	87	59.473	ENSOANG00000004314	EIF3B	97	60.135	Ornithorhynchus_anatinus
ENSCING00000003620	-	96	60.383	ENSOCUG00000010289	EIF3B	97	60.994	Oryctolagus_cuniculus
ENSCING00000003620	-	97	59.882	ENSORLG00000008861	eif3bb	97	60.451	Oryzias_latipes
ENSCING00000003620	-	97	59.882	ENSORLG00020012732	eif3bb	97	60.451	Oryzias_latipes_hni
ENSCING00000003620	-	95	60.060	ENSORLG00015000357	eif3bb	97	60.451	Oryzias_latipes_hsok
ENSCING00000003620	-	95	60.329	ENSOMEG00000017895	eif3bb	96	61.094	Oryzias_melastigma
ENSCING00000003620	-	96	55.800	ENSOGAG00000006319	EIF3B	89	56.306	Otolemur_garnettii
ENSCING00000003620	-	96	56.259	ENSOARG00000005137	EIF3B	93	56.777	Ovis_aries
ENSCING00000003620	-	96	60.503	ENSPPAG00000032833	EIF3B	93	61.120	Pan_paniscus
ENSCING00000003620	-	96	60.597	ENSPPRG00000003071	EIF3B	83	60.968	Panthera_pardus
ENSCING00000003620	-	93	60.458	ENSPTIG00000013328	EIF3B	81	61.094	Panthera_tigris_altaica
ENSCING00000003620	-	96	60.503	ENSPTRG00000046041	-	85	61.120	Pan_troglodytes
ENSCING00000003620	-	96	60.503	ENSPTRG00000018860	EIF3B	85	61.120	Pan_troglodytes
ENSCING00000003620	-	96	60.503	ENSPANG00000014557	EIF3B	85	61.120	Papio_anubis
ENSCING00000003620	-	96	60.597	ENSPKIG00000011735	eif3bb	96	60.883	Paramormyrops_kingsleyae
ENSCING00000003620	-	95	60.329	ENSPKIG00000009981	eif3ba	96	60.883	Paramormyrops_kingsleyae
ENSCING00000003620	-	95	61.377	ENSPSIG00000009889	EIF3B	90	61.689	Pelodiscus_sinensis
ENSCING00000003620	-	96	60.507	ENSPMGG00000016466	eif3bb	97	60.790	Periophthalmus_magnuspinnatus
ENSCING00000003620	-	96	60.799	ENSPEMG00000021554	Eif3b	82	61.422	Peromyscus_maniculatus_bairdii
ENSCING00000003620	-	89	60.480	ENSPMAG00000005331	eif3bb	96	60.480	Petromyzon_marinus
ENSCING00000003620	-	93	60.458	ENSPCIG00000009464	EIF3B	95	61.094	Phascolarctos_cinereus
ENSCING00000003620	-	92	60.248	ENSPFOG00000001449	eif3bb	96	60.790	Poecilia_formosa
ENSCING00000003620	-	92	57.187	ENSPLAG00000005120	eif3bb	96	57.791	Poecilia_latipinna
ENSCING00000003620	-	92	60.248	ENSPMEG00000015157	eif3bb	97	60.790	Poecilia_mexicana
ENSCING00000003620	-	92	60.342	ENSPREG00000006422	eif3bb	96	60.790	Poecilia_reticulata
ENSCING00000003620	-	95	60.629	ENSPPYG00000017313	EIF3B	75	60.817	Pongo_abelii
ENSCING00000003620	-	61	60.135	ENSPCAG00000010455	-	69	60.135	Procavia_capensis
ENSCING00000003620	-	96	60.503	ENSPCOG00000025894	EIF3B	81	60.935	Propithecus_coquereli
ENSCING00000003620	-	92	60.155	ENSPVAG00000013735	EIF3B	90	60.502	Pteropus_vampyrus
ENSCING00000003620	-	92	50.689	ENSPNYG00000014859	eif3bb	95	51.506	Pundamilia_nyererei
ENSCING00000003620	-	96	60.746	ENSPNAG00000021677	eif3ba	96	61.187	Pygocentrus_nattereri
ENSCING00000003620	-	96	60.651	ENSRNOG00000001253	Eif3b	82	61.271	Rattus_norvegicus
ENSCING00000003620	-	93	60.337	ENSRBIG00000030590	EIF3B	92	60.972	Rhinopithecus_bieti
ENSCING00000003620	-	96	60.503	ENSRROG00000035023	EIF3B	85	61.120	Rhinopithecus_roxellana
ENSCING00000003620	-	96	60.503	ENSSBOG00000001954	EIF3B	83	61.120	Saimiri_boliviensis_boliviensis
ENSCING00000003620	-	96	60.266	ENSSHAG00000001063	EIF3B	79	60.876	Sarcophilus_harrisii
ENSCING00000003620	-	95	60.928	ENSSFOG00015005824	eif3ba	95	61.492	Scleropages_formosus
ENSCING00000003620	-	96	60.896	ENSSFOG00015006390	eif3bb	95	61.187	Scleropages_formosus
ENSCING00000003620	-	96	59.613	ENSSMAG00000021264	eif3bb	96	60.030	Scophthalmus_maximus
ENSCING00000003620	-	95	60.479	ENSSDUG00000016761	eif3bb	96	60.942	Seriola_dumerili
ENSCING00000003620	-	92	60.278	ENSSLDG00000022874	eif3bb	96	61.094	Seriola_lalandi_dorsalis
ENSCING00000003620	-	92	60.310	ENSSARG00000006036	EIF3B	97	60.502	Sorex_araneus
ENSCING00000003620	-	93	60.092	ENSSPUG00000001870	EIF3B	98	60.469	Sphenodon_punctatus
ENSCING00000003620	-	92	60.278	ENSSPAG00000013403	eif3bb	96	60.942	Stegastes_partitus
ENSCING00000003620	-	96	60.503	ENSSSCG00000039390	EIF3B	84	61.120	Sus_scrofa
ENSCING00000003620	-	96	60.296	ENSTGUG00000008140	EIF3B	98	60.758	Taeniopygia_guttata
ENSCING00000003620	-	95	59.880	ENSTRUG00000011064	eif3bb	96	60.486	Takifugu_rubripes
ENSCING00000003620	-	95	60.270	ENSTNIG00000004648	eif3bb	98	60.303	Tetraodon_nigroviridis
ENSCING00000003620	-	95	53.731	ENSTBEG00000012836	EIF3B	75	53.846	Tupaia_belangeri
ENSCING00000003620	-	95	53.892	ENSTTRG00000014713	EIF3B	77	54.009	Tursiops_truncatus
ENSCING00000003620	-	96	59.524	ENSUAMG00000000800	EIF3B	96	60.938	Ursus_americanus
ENSCING00000003620	-	96	59.524	ENSUMAG00000007200	EIF3B	96	60.938	Ursus_maritimus
ENSCING00000003620	-	96	59.463	ENSVVUG00000004280	EIF3B	98	61.156	Vulpes_vulpes
ENSCING00000003620	-	94	59.697	ENSXETG00000020593	eif3b	96	59.545	Xenopus_tropicalis
ENSCING00000003620	-	92	59.845	ENSXCOG00000008279	eif3bb	96	60.334	Xiphophorus_couchianus
ENSCING00000003620	-	92	59.690	ENSXMAG00000004705	eif3bb	96	60.182	Xiphophorus_maculatus