EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000003655 (Gene tree)
Gene ID: 100186185
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 6842 bases
Position: chr4:3273251-3280092
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000007520	DEAD	PF00270.29	1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000007520	-	2110	-	ENSCINP00000007520	691 (aa)	-	F7AXN3

Gene Model

Click here to download ENSCING00000003655's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000003655's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000003655	-	67	72.727	ENSG00000089737	DDX24	76	48.187	Homo_sapiens
ENSCING00000003655	-	80	49.650	ENSAPOG00000014909	ddx24	57	52.874	Acanthochromis_polyacanthus
ENSCING00000003655	-	72	57.971	ENSAMEG00000015848	DDX24	61	57.971	Ailuropoda_melanoleuca
ENSCING00000003655	-	68	52.273	ENSACIG00000024338	ddx24	93	42.364	Amphilophus_citrinellus
ENSCING00000003655	-	80	49.184	ENSAOCG00000006168	ddx24	57	54.023	Amphiprion_ocellaris
ENSCING00000003655	-	79	48.718	ENSAPEG00000023765	ddx24	56	54.023	Amphiprion_percula
ENSCING00000003655	-	75	65.217	ENSATEG00000022048	ddx24	56	65.217	Anabas_testudineus
ENSCING00000003655	-	76	44.214	ENSAPLG00000011111	DDX24	69	44.214	Anas_platyrhynchos
ENSCING00000003655	-	81	43.415	ENSACAG00000008545	DDX24	70	44.792	Anolis_carolinensis
ENSCING00000003655	-	67	72.727	ENSANAG00000003080	DDX24	58	72.727	Aotus_nancymaae
ENSCING00000003655	-	76	59.551	ENSACLG00000022194	ddx24	60	58.889	Astatotilapia_calliptera
ENSCING00000003655	-	73	60.811	ENSAMXG00000014635	ddx24	68	44.592	Astyanax_mexicanus
ENSCING00000003655	-	72	58.824	ENSBTAG00000003423	DDX24	52	58.824	Bos_taurus
ENSCING00000003655	-	84	39.796	WBGene00018890	F55F8.2	61	42.798	Caenorhabditis_elegans
ENSCING00000003655	-	72	59.420	ENSCJAG00000009683	DDX24	76	48.187	Callithrix_jacchus
ENSCING00000003655	-	72	57.971	ENSCAFG00000017624	DDX24	66	57.971	Canis_familiaris
ENSCING00000003655	-	72	57.971	ENSCAFG00020014505	DDX24	61	57.971	Canis_lupus_dingo
ENSCING00000003655	-	72	58.824	ENSCHIG00000010074	DDX24	52	58.824	Capra_hircus
ENSCING00000003655	-	55	45.026	ENSTSYG00000025429	-	82	45.026	Carlito_syrichta
ENSCING00000003655	-	66	75.000	ENSTSYG00000030376	-	58	63.636	Carlito_syrichta
ENSCING00000003655	-	66	44.206	ENSCAPG00000007592	DDX24	61	46.135	Cavia_aperea
ENSCING00000003655	-	75	57.971	ENSCPOG00000005884	DDX24	56	57.971	Cavia_porcellus
ENSCING00000003655	-	72	59.420	ENSCCAG00000036112	DDX24	76	48.187	Cebus_capucinus
ENSCING00000003655	-	76	57.971	ENSCATG00000038277	DDX24	77	43.946	Cercocebus_atys
ENSCING00000003655	-	93	45.977	ENSCLAG00000011454	DDX24	64	57.971	Chinchilla_lanigera
ENSCING00000003655	-	72	57.971	ENSCSAG00000010975	DDX24	55	57.971	Chlorocebus_sabaeus
ENSCING00000003655	-	80	44.354	ENSCPBG00000008942	DDX24	70	45.267	Chrysemys_picta_bellii
ENSCING00000003655	-	99	71.652	ENSCSAVG00000001436	-	95	70.228	Ciona_savignyi
ENSCING00000003655	-	72	57.971	ENSCANG00000035722	-	51	57.971	Colobus_angolensis_palliatus
ENSCING00000003655	-	62	45.035	ENSCANG00000031880	-	73	44.598	Colobus_angolensis_palliatus
ENSCING00000003655	-	73	60.870	ENSCGRG00001009522	Ddx24	61	60.870	Cricetulus_griseus_chok1gshd
ENSCING00000003655	-	73	60.870	ENSCGRG00000015047	Ddx24	61	60.870	Cricetulus_griseus_crigri
ENSCING00000003655	-	71	63.768	ENSCSEG00000001004	ddx24	54	62.857	Cynoglossus_semilaevis
ENSCING00000003655	-	64	47.661	ENSCVAG00000005890	ddx24	81	47.186	Cyprinodon_variegatus
ENSCING00000003655	-	76	43.847	ENSDARG00000104708	ddx24	68	44.194	Danio_rerio
ENSCING00000003655	-	74	59.701	ENSDNOG00000005339	DDX24	54	57.971	Dasypus_novemcinctus
ENSCING00000003655	-	73	59.420	ENSDORG00000003636	Ddx24	83	43.841	Dipodomys_ordii
ENSCING00000003655	-	79	42.881	FBgn0034496	CG9143	69	43.080	Drosophila_melanogaster
ENSCING00000003655	-	76	59.420	ENSETEG00000009693	DDX24	67	59.420	Echinops_telfairi
ENSCING00000003655	-	55	44.125	ENSEBUG00000015781	-	61	44.125	Eptatretus_burgeri
ENSCING00000003655	-	72	59.420	ENSEASG00005021430	DDX24	55	59.420	Equus_asinus_asinus
ENSCING00000003655	-	72	59.420	ENSECAG00000008887	DDX24	55	59.420	Equus_caballus
ENSCING00000003655	-	76	57.971	ENSEEUG00000001618	DDX24	55	57.971	Erinaceus_europaeus
ENSCING00000003655	-	72	60.294	ENSELUG00000009567	ddx24	78	49.652	Esox_lucius
ENSCING00000003655	-	80	49.485	ENSFCAG00000010229	DDX24	64	57.971	Felis_catus
ENSCING00000003655	-	79	43.636	ENSFALG00000002491	DDX24	72	43.973	Ficedula_albicollis
ENSCING00000003655	-	73	57.971	ENSFDAG00000014561	DDX24	56	57.971	Fukomys_damarensis
ENSCING00000003655	-	76	44.674	ENSFHEG00000010949	ddx24	68	44.674	Fundulus_heteroclitus
ENSCING00000003655	-	80	43.212	ENSGMOG00000010403	ddx24	70	44.774	Gadus_morhua
ENSCING00000003655	-	81	44.498	ENSGALG00000010884	DDX24	71	45.671	Gallus_gallus
ENSCING00000003655	-	61	48.456	ENSGAFG00000009607	ddx24	86	48.380	Gambusia_affinis
ENSCING00000003655	-	79	41.653	ENSGACG00000008087	ddx24	60	63.889	Gasterosteus_aculeatus
ENSCING00000003655	-	72	59.420	ENSGGOG00000006739	DDX24	82	48.187	Gorilla_gorilla
ENSCING00000003655	-	76	59.551	ENSHBUG00000021747	ddx24	60	58.889	Haplochromis_burtoni
ENSCING00000003655	-	76	41.831	ENSHGLG00000010321	-	63	43.504	Heterocephalus_glaber_female
ENSCING00000003655	-	70	55.072	ENSHGLG00000003177	-	88	37.709	Heterocephalus_glaber_female
ENSCING00000003655	-	76	57.971	ENSHGLG00100013439	DDX24	61	57.971	Heterocephalus_glaber_male
ENSCING00000003655	-	76	50.000	ENSHCOG00000019867	ddx24	63	48.214	Hippocampus_comes
ENSCING00000003655	-	73	63.768	ENSIPUG00000007005	ddx24	58	63.768	Ictalurus_punctatus
ENSCING00000003655	-	73	57.971	ENSSTOG00000005355	DDX24	52	57.971	Ictidomys_tridecemlineatus
ENSCING00000003655	-	91	45.372	ENSJJAG00000010842	Ddx24	76	45.147	Jaculus_jaculus
ENSCING00000003655	-	76	55.682	ENSKMAG00000004507	ddx24	67	44.688	Kryptolebias_marmoratus
ENSCING00000003655	-	80	48.148	ENSLBEG00000020888	ddx24	64	41.653	Labrus_bergylta
ENSCING00000003655	-	76	46.325	ENSLACG00000006072	DDX24	71	46.325	Latimeria_chalumnae
ENSCING00000003655	-	75	60.563	ENSLOCG00000012997	ddx24	59	60.563	Lepisosteus_oculatus
ENSCING00000003655	-	72	62.319	ENSLAFG00000029076	DDX24	51	62.319	Loxodonta_africana
ENSCING00000003655	-	72	57.971	ENSMFAG00000033695	DDX24	51	57.971	Macaca_fascicularis
ENSCING00000003655	-	72	57.971	ENSMMUG00000007763	DDX24	83	47.927	Macaca_mulatta
ENSCING00000003655	-	72	57.971	ENSMNEG00000043984	DDX24	51	57.971	Macaca_nemestrina
ENSCING00000003655	-	72	57.971	ENSMLEG00000039614	DDX24	70	47.927	Mandrillus_leucophaeus
ENSCING00000003655	-	75	62.319	ENSMAMG00000003235	ddx24	57	61.429	Mastacembelus_armatus
ENSCING00000003655	-	76	59.551	ENSMZEG00005008402	ddx24	62	58.889	Maylandia_zebra
ENSCING00000003655	-	76	45.671	ENSMGAG00000013175	DDX24	72	45.501	Meleagris_gallopavo
ENSCING00000003655	-	73	59.420	ENSMAUG00000020026	Ddx24	57	59.420	Mesocricetus_auratus
ENSCING00000003655	-	76	59.420	ENSMICG00000008376	DDX24	79	44.468	Microcebus_murinus
ENSCING00000003655	-	73	57.971	ENSMOCG00000013171	Ddx24	57	57.971	Microtus_ochrogaster
ENSCING00000003655	-	83	48.673	ENSMMOG00000013945	ddx24	89	50.000	Mola_mola
ENSCING00000003655	-	76	45.267	ENSMODG00000002336	DDX24	70	45.611	Monodelphis_domestica
ENSCING00000003655	-	76	49.550	ENSMALG00000007688	ddx24	55	65.217	Monopterus_albus
ENSCING00000003655	-	76	59.420	MGP_CAROLIEiJ_G0018053	Ddx24	60	59.420	Mus_caroli
ENSCING00000003655	-	76	59.420	ENSMUSG00000041645	Ddx24	60	59.420	Mus_musculus
ENSCING00000003655	-	76	59.420	MGP_SPRETEiJ_G0018898	Ddx24	58	59.420	Mus_spretus
ENSCING00000003655	-	72	57.971	ENSMPUG00000003318	DDX24	61	57.971	Mustela_putorius_furo
ENSCING00000003655	-	72	59.420	ENSNGAG00000001003	-	57	59.420	Nannospalax_galili
ENSCING00000003655	-	91	42.299	ENSNGAG00000014769	-	70	44.560	Nannospalax_galili
ENSCING00000003655	-	75	60.674	ENSNBRG00000007296	ddx24	58	60.000	Neolamprologus_brichardi
ENSCING00000003655	-	60	43.813	ENSNLEG00000017240	DDX24	62	42.228	Nomascus_leucogenys
ENSCING00000003655	-	88	51.385	ENSMEUG00000010386	-	58	55.882	Notamacropus_eugenii
ENSCING00000003655	-	76	57.971	ENSODEG00000002236	-	84	47.570	Octodon_degus
ENSCING00000003655	-	76	59.551	ENSONIG00000020143	ddx24	63	58.889	Oreochromis_niloticus
ENSCING00000003655	-	56	31.683	ENSOANG00000002839	-	96	32.308	Ornithorhynchus_anatinus
ENSCING00000003655	-	76	43.271	ENSOANG00000014362	DDX24	70	43.537	Ornithorhynchus_anatinus
ENSCING00000003655	-	91	45.662	ENSOCUG00000002604	DDX24	55	59.420	Oryctolagus_cuniculus
ENSCING00000003655	-	81	41.561	ENSORLG00000004581	ddx24	68	42.712	Oryzias_latipes
ENSCING00000003655	-	81	48.113	ENSORLG00020008743	ddx24	68	42.542	Oryzias_latipes_hni
ENSCING00000003655	-	81	49.057	ENSORLG00015007758	ddx24	68	42.712	Oryzias_latipes_hsok
ENSCING00000003655	-	77	50.000	ENSOMEG00000023149	ddx24	68	44.521	Oryzias_melastigma
ENSCING00000003655	-	76	52.381	ENSOGAG00000005841	DDX24	62	52.381	Otolemur_garnettii
ENSCING00000003655	-	72	58.824	ENSOARG00000014341	DDX24	52	58.824	Ovis_aries
ENSCING00000003655	-	72	59.420	ENSPPAG00000038713	DDX24	76	48.187	Pan_paniscus
ENSCING00000003655	-	76	57.971	ENSPPRG00000007394	DDX24	64	57.971	Panthera_pardus
ENSCING00000003655	-	73	57.971	ENSPTIG00000013158	DDX24	69	47.113	Panthera_tigris_altaica
ENSCING00000003655	-	72	59.420	ENSPTRG00000006673	DDX24	76	47.927	Pan_troglodytes
ENSCING00000003655	-	72	57.971	ENSPANG00000022385	DDX24	51	57.971	Papio_anubis
ENSCING00000003655	-	76	56.989	ENSPKIG00000005168	ddx24	61	56.989	Paramormyrops_kingsleyae
ENSCING00000003655	-	97	40.591	ENSPSIG00000009329	DDX24	90	40.756	Pelodiscus_sinensis
ENSCING00000003655	-	62	47.430	ENSPMGG00000019572	ddx24	88	47.005	Periophthalmus_magnuspinnatus
ENSCING00000003655	-	73	59.420	ENSPEMG00000018618	Ddx24	56	59.420	Peromyscus_maniculatus_bairdii
ENSCING00000003655	-	76	45.739	ENSPCIG00000026635	DDX24	69	45.739	Phascolarctos_cinereus
ENSCING00000003655	-	78	44.221	ENSPFOG00000011214	ddx24	86	47.449	Poecilia_formosa
ENSCING00000003655	-	78	43.886	ENSPLAG00000010940	ddx24	87	47.846	Poecilia_latipinna
ENSCING00000003655	-	62	48.037	ENSPMEG00000006458	ddx24	87	47.619	Poecilia_mexicana
ENSCING00000003655	-	78	44.482	ENSPREG00000014459	ddx24	85	48.499	Poecilia_reticulata
ENSCING00000003655	-	72	59.420	ENSPPYG00000006095	DDX24	51	59.420	Pongo_abelii
ENSCING00000003655	-	73	60.870	ENSPCAG00000002873	DDX24	64	60.870	Procavia_capensis
ENSCING00000003655	-	69	63.415	ENSPCOG00000018298	DDX24	62	63.415	Propithecus_coquereli
ENSCING00000003655	-	73	59.420	ENSPVAG00000015101	DDX24	55	59.420	Pteropus_vampyrus
ENSCING00000003655	-	76	59.551	ENSPNYG00000022795	ddx24	60	58.889	Pundamilia_nyererei
ENSCING00000003655	-	72	62.319	ENSPNAG00000008956	ddx24	58	62.319	Pygocentrus_nattereri
ENSCING00000003655	-	76	59.420	ENSRNOG00000009166	Ddx24	61	59.420	Rattus_norvegicus
ENSCING00000003655	-	67	71.875	ENSRBIG00000039022	DDX24	76	47.668	Rhinopithecus_bieti
ENSCING00000003655	-	72	56.522	ENSRROG00000023933	-	76	44.041	Rhinopithecus_roxellana
ENSCING00000003655	-	62	43.418	ENSRROG00000039473	-	76	45.596	Rhinopithecus_roxellana
ENSCING00000003655	-	76	34.192	YBR142W	-	65	34.133	Saccharomyces_cerevisiae
ENSCING00000003655	-	72	59.420	ENSSBOG00000035521	DDX24	82	48.446	Saimiri_boliviensis_boliviensis
ENSCING00000003655	-	76	47.266	ENSSHAG00000009060	DDX24	69	47.266	Sarcophilus_harrisii
ENSCING00000003655	-	76	50.000	ENSSFOG00015015044	ddx24	60	49.524	Scleropages_formosus
ENSCING00000003655	-	78	51.485	ENSSMAG00000002784	ddx24	58	53.763	Scophthalmus_maximus
ENSCING00000003655	-	79	50.962	ENSSDUG00000001658	ddx24	56	60.000	Seriola_dumerili
ENSCING00000003655	-	75	60.870	ENSSLDG00000019202	ddx24	56	60.000	Seriola_lalandi_dorsalis
ENSCING00000003655	-	80	43.306	ENSSPUG00000017730	DDX24	71	43.932	Sphenodon_punctatus
ENSCING00000003655	-	80	48.843	ENSSPAG00000011620	ddx24	66	44.556	Stegastes_partitus
ENSCING00000003655	-	76	59.420	ENSSSCG00000002470	DDX24	64	59.420	Sus_scrofa
ENSCING00000003655	-	62	48.724	ENSTGUG00000012637	-	89	48.724	Taeniopygia_guttata
ENSCING00000003655	-	76	45.098	ENSTRUG00000006101	ddx24	65	45.374	Takifugu_rubripes
ENSCING00000003655	-	76	45.488	ENSTNIG00000017368	ddx24	67	45.488	Tetraodon_nigroviridis
ENSCING00000003655	-	72	57.971	ENSTTRG00000008795	DDX24	52	57.971	Tursiops_truncatus
ENSCING00000003655	-	54	49.211	ENSUAMG00000024662	DDX24	77	49.866	Ursus_americanus
ENSCING00000003655	-	73	57.971	ENSUMAG00000004481	DDX24	64	57.971	Ursus_maritimus
ENSCING00000003655	-	72	57.971	ENSVVUG00000018672	DDX24	66	57.971	Vulpes_vulpes
ENSCING00000003655	-	95	41.241	ENSXETG00000010314	ddx24	73	45.890	Xenopus_tropicalis
ENSCING00000003655	-	60	47.608	ENSXMAG00000013600	ddx24	84	46.452	Xiphophorus_maculatus