EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000003676 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 1128 bases
Position: chr12:2459470-2460597
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000007582	MMR_HSR1	PF01926.23	2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000007582	-	1074	-	ENSCINP00000007582	357 (aa)	-	F6ZV18

Gene Model

Click here to download ENSCING00000003676's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000003676's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000003676	-	83	34.899	ENSG00000132591	ERAL1	67	34.899	Homo_sapiens
ENSCING00000003676	-	88	33.841	ENSAPOG00000000093	eral1	77	33.951	Acanthochromis_polyacanthus
ENSCING00000003676	-	83	34.228	ENSAMEG00000004602	ERAL1	67	34.228	Ailuropoda_melanoleuca
ENSCING00000003676	-	88	34.154	ENSACIG00000011545	eral1	73	34.154	Amphilophus_citrinellus
ENSCING00000003676	-	88	34.756	ENSAOCG00000014398	eral1	73	34.756	Amphiprion_ocellaris
ENSCING00000003676	-	88	34.451	ENSAPEG00000015466	eral1	73	34.451	Amphiprion_percula
ENSCING00000003676	-	88	33.030	ENSATEG00000005857	eral1	73	33.030	Anabas_testudineus
ENSCING00000003676	-	98	30.423	ENSANAG00000022216	-	79	30.423	Aotus_nancymaae
ENSCING00000003676	-	88	32.831	ENSACLG00000006437	eral1	72	32.831	Astatotilapia_calliptera
ENSCING00000003676	-	97	32.000	ENSAMXG00000037957	eral1	82	32.345	Astyanax_mexicanus
ENSCING00000003676	-	91	32.047	ENSBTAG00000015639	ERAL1	73	32.047	Bos_taurus
ENSCING00000003676	-	90	32.827	ENSCJAG00000045605	ERAL1	74	32.827	Callithrix_jacchus
ENSCING00000003676	-	83	34.228	ENSCAFG00000018813	ERAL1	67	34.228	Canis_familiaris
ENSCING00000003676	-	83	34.228	ENSCAFG00020011718	ERAL1	67	34.228	Canis_lupus_dingo
ENSCING00000003676	-	91	32.121	ENSCHIG00000021850	ERAL1	73	32.121	Capra_hircus
ENSCING00000003676	-	83	33.670	ENSTSYG00000007492	ERAL1	67	33.670	Carlito_syrichta
ENSCING00000003676	-	83	32.781	ENSCPOG00000009576	ERAL1	67	32.781	Cavia_porcellus
ENSCING00000003676	-	98	31.831	ENSCCAG00000036226	-	79	31.831	Cebus_capucinus
ENSCING00000003676	-	83	34.667	ENSCATG00000041378	ERAL1	67	34.667	Cercocebus_atys
ENSCING00000003676	-	83	31.579	ENSCLAG00000004778	ERAL1	83	37.984	Chinchilla_lanigera
ENSCING00000003676	-	83	35.117	ENSCSAG00000007105	ERAL1	67	35.117	Chlorocebus_sabaeus
ENSCING00000003676	-	83	35.235	ENSCANG00000028131	ERAL1	67	35.235	Colobus_angolensis_palliatus
ENSCING00000003676	-	90	30.982	ENSCGRG00001016601	Eral1	72	31.902	Cricetulus_griseus_chok1gshd
ENSCING00000003676	-	90	30.982	ENSCGRG00000002004	Eral1	72	31.902	Cricetulus_griseus_crigri
ENSCING00000003676	-	88	32.229	ENSCSEG00000016147	eral1	76	31.818	Cynoglossus_semilaevis
ENSCING00000003676	-	85	35.535	ENSCVAG00000013714	eral1	70	35.535	Cyprinodon_variegatus
ENSCING00000003676	-	89	32.722	ENSDARG00000059887	eral1	73	32.722	Danio_rerio
ENSCING00000003676	-	83	31.438	ENSDNOG00000044554	ERAL1	67	32.441	Dasypus_novemcinctus
ENSCING00000003676	-	98	31.006	ENSDORG00000011319	Eral1	80	31.006	Dipodomys_ordii
ENSCING00000003676	-	80	33.684	FBgn0038106	CG7488	71	33.684	Drosophila_melanogaster
ENSCING00000003676	-	58	35.047	ENSETEG00000011551	ERAL1	63	35.047	Echinops_telfairi
ENSCING00000003676	-	89	31.657	ENSEBUG00000004405	eral1	73	31.657	Eptatretus_burgeri
ENSCING00000003676	-	90	32.099	ENSEASG00005009864	ERAL1	72	32.099	Equus_asinus_asinus
ENSCING00000003676	-	90	31.988	ENSECAG00000013325	ERAL1	72	31.988	Equus_caballus
ENSCING00000003676	-	67	30.924	ENSEEUG00000005568	ERAL1	54	30.924	Erinaceus_europaeus
ENSCING00000003676	-	87	30.723	ENSELUG00000021860	eral1	72	30.723	Esox_lucius
ENSCING00000003676	-	83	32.450	ENSFCAG00000005232	ERAL1	67	32.450	Felis_catus
ENSCING00000003676	-	92	30.137	ENSFALG00000006357	ERAL1	93	30.137	Ficedula_albicollis
ENSCING00000003676	-	83	33.663	ENSFDAG00000001767	ERAL1	83	40.310	Fukomys_damarensis
ENSCING00000003676	-	85	34.906	ENSFHEG00000012028	eral1	70	34.906	Fundulus_heteroclitus
ENSCING00000003676	-	68	39.394	ENSGMOG00000014198	eral1	71	39.394	Gadus_morhua
ENSCING00000003676	-	88	36.170	ENSGAFG00000013837	eral1	71	36.170	Gambusia_affinis
ENSCING00000003676	-	85	35.484	ENSGACG00000020251	eral1	84	40.441	Gasterosteus_aculeatus
ENSCING00000003676	-	67	33.610	ENSGGOG00000015953	ERAL1	64	33.610	Gorilla_gorilla
ENSCING00000003676	-	88	32.831	ENSHBUG00000022014	eral1	72	32.831	Haplochromis_burtoni
ENSCING00000003676	-	83	32.013	ENSHGLG00000009773	ERAL1	67	32.013	Heterocephalus_glaber_female
ENSCING00000003676	-	83	32.013	ENSHGLG00100018820	ERAL1	67	32.013	Heterocephalus_glaber_male
ENSCING00000003676	-	87	33.739	ENSHCOG00000009314	eral1	75	33.739	Hippocampus_comes
ENSCING00000003676	-	94	33.708	ENSIPUG00000013409	eral1	79	33.708	Ictalurus_punctatus
ENSCING00000003676	-	85	33.993	ENSSTOG00000003459	ERAL1	68	33.993	Ictidomys_tridecemlineatus
ENSCING00000003676	-	67	31.950	ENSJJAG00000014664	-	81	31.950	Jaculus_jaculus
ENSCING00000003676	-	88	35.347	ENSKMAG00000012520	eral1	73	35.347	Kryptolebias_marmoratus
ENSCING00000003676	-	85	33.333	ENSLBEG00000016447	eral1	70	33.645	Labrus_bergylta
ENSCING00000003676	-	92	31.025	ENSLACG00000012328	ERAL1	86	31.025	Latimeria_chalumnae
ENSCING00000003676	-	91	32.022	ENSLOCG00000003302	eral1	80	30.563	Lepisosteus_oculatus
ENSCING00000003676	-	83	34.333	ENSMFAG00000000501	ERAL1	67	34.333	Macaca_fascicularis
ENSCING00000003676	-	85	33.876	ENSMMUG00000002776	ERAL1	56	34.333	Macaca_mulatta
ENSCING00000003676	-	92	33.333	ENSMNEG00000039112	ERAL1	75	33.333	Macaca_nemestrina
ENSCING00000003676	-	83	34.667	ENSMLEG00000040246	ERAL1	67	34.667	Mandrillus_leucophaeus
ENSCING00000003676	-	88	32.927	ENSMAMG00000006623	eral1	73	32.927	Mastacembelus_armatus
ENSCING00000003676	-	88	32.831	ENSMZEG00005000255	eral1	72	32.831	Maylandia_zebra
ENSCING00000003676	-	68	31.855	ENSMAUG00000001516	Eral1	74	33.065	Mesocricetus_auratus
ENSCING00000003676	-	83	33.333	ENSMICG00000005345	ERAL1	66	33.333	Microcebus_murinus
ENSCING00000003676	-	90	31.790	ENSMOCG00000022786	Eral1	72	32.716	Microtus_ochrogaster
ENSCING00000003676	-	85	33.750	ENSMMOG00000005143	eral1	79	33.750	Mola_mola
ENSCING00000003676	-	89	33.125	ENSMODG00000019305	ERAL1	75	33.125	Monodelphis_domestica
ENSCING00000003676	-	85	36.196	ENSMALG00000013394	eral1	83	36.196	Monopterus_albus
ENSCING00000003676	-	90	31.420	MGP_CAROLIEiJ_G0016788	Eral1	73	32.326	Mus_caroli
ENSCING00000003676	-	90	31.515	ENSMUSG00000020832	Eral1	73	32.424	Mus_musculus
ENSCING00000003676	-	90	31.420	MGP_SPRETEiJ_G0017631	Eral1	73	32.326	Mus_spretus
ENSCING00000003676	-	83	33.557	ENSMPUG00000014146	ERAL1	67	33.557	Mustela_putorius_furo
ENSCING00000003676	-	90	32.508	ENSMLUG00000013467	ERAL1	72	32.508	Myotis_lucifugus
ENSCING00000003676	-	83	33.893	ENSNGAG00000019318	Eral1	67	33.893	Nannospalax_galili
ENSCING00000003676	-	88	33.538	ENSNBRG00000015799	eral1	72	33.538	Neolamprologus_brichardi
ENSCING00000003676	-	83	34.564	ENSNLEG00000002994	ERAL1	67	34.564	Nomascus_leucogenys
ENSCING00000003676	-	90	31.193	ENSMEUG00000015582	ERAL1	80	31.193	Notamacropus_eugenii
ENSCING00000003676	-	83	32.323	ENSOPRG00000014488	ERAL1	66	33.333	Ochotona_princeps
ENSCING00000003676	-	59	34.884	ENSODEG00000011337	ERAL1	82	34.884	Octodon_degus
ENSCING00000003676	-	88	33.133	ENSONIG00000012792	eral1	78	33.133	Oreochromis_niloticus
ENSCING00000003676	-	90	31.498	ENSOCUG00000005572	ERAL1	74	31.498	Oryctolagus_cuniculus
ENSCING00000003676	-	88	33.851	ENSORLG00000011440	eral1	73	33.851	Oryzias_latipes
ENSCING00000003676	-	88	34.161	ENSORLG00020018272	eral1	73	34.161	Oryzias_latipes_hni
ENSCING00000003676	-	88	33.851	ENSORLG00015001511	eral1	73	33.851	Oryzias_latipes_hsok
ENSCING00000003676	-	88	32.710	ENSOMEG00000007662	eral1	72	32.710	Oryzias_melastigma
ENSCING00000003676	-	90	33.642	ENSOGAG00000011082	ERAL1	72	33.642	Otolemur_garnettii
ENSCING00000003676	-	91	31.595	ENSOARG00000004456	ERAL1	67	31.595	Ovis_aries
ENSCING00000003676	-	71	32.567	ENSPPAG00000033864	-	98	32.567	Pan_paniscus
ENSCING00000003676	-	83	32.450	ENSPPRG00000006097	ERAL1	67	32.450	Panthera_pardus
ENSCING00000003676	-	83	32.450	ENSPTIG00000013961	ERAL1	67	32.450	Panthera_tigris_altaica
ENSCING00000003676	-	83	34.899	ENSPTRG00000008938	ERAL1	67	34.899	Pan_troglodytes
ENSCING00000003676	-	83	34.667	ENSPANG00000023400	ERAL1	67	34.667	Papio_anubis
ENSCING00000003676	-	90	32.653	ENSPKIG00000016278	eral1	75	33.236	Paramormyrops_kingsleyae
ENSCING00000003676	-	88	34.043	ENSPMGG00000007387	eral1	76	34.043	Periophthalmus_magnuspinnatus
ENSCING00000003676	-	90	31.790	ENSPEMG00000000668	Eral1	72	31.790	Peromyscus_maniculatus_bairdii
ENSCING00000003676	-	82	33.003	ENSPMAG00000008076	eral1	86	33.003	Petromyzon_marinus
ENSCING00000003676	-	88	36.280	ENSPFOG00000018592	eral1	81	36.280	Poecilia_formosa
ENSCING00000003676	-	88	36.280	ENSPLAG00000022753	eral1	73	36.280	Poecilia_latipinna
ENSCING00000003676	-	88	36.280	ENSPMEG00000018207	eral1	75	36.728	Poecilia_mexicana
ENSCING00000003676	-	85	36.478	ENSPREG00000006895	eral1	73	36.478	Poecilia_reticulata
ENSCING00000003676	-	83	34.899	ENSPPYG00000008113	ERAL1	67	34.899	Pongo_abelii
ENSCING00000003676	-	90	31.532	ENSPCAG00000003013	ERAL1	74	31.532	Procavia_capensis
ENSCING00000003676	-	85	32.686	ENSPCOG00000023179	ERAL1	68	32.686	Propithecus_coquereli
ENSCING00000003676	-	90	32.121	ENSPVAG00000001796	ERAL1	74	32.121	Pteropus_vampyrus
ENSCING00000003676	-	88	32.831	ENSPNYG00000017330	eral1	72	32.831	Pundamilia_nyererei
ENSCING00000003676	-	96	33.242	ENSPNAG00000009960	eral1	81	33.242	Pygocentrus_nattereri
ENSCING00000003676	-	90	31.420	ENSRNOG00000010673	Eral1	72	32.024	Rattus_norvegicus
ENSCING00000003676	-	83	34.333	ENSRBIG00000006150	ERAL1	67	34.333	Rhinopithecus_bieti
ENSCING00000003676	-	83	34.000	ENSRROG00000026778	ERAL1	74	32.024	Rhinopithecus_roxellana
ENSCING00000003676	-	90	30.838	ENSSHAG00000014995	ERAL1	86	32.110	Sarcophilus_harrisii
ENSCING00000003676	-	92	34.637	ENSSFOG00015015511	eral1	88	34.637	Scleropages_formosus
ENSCING00000003676	-	88	34.848	ENSSMAG00000000305	eral1	73	35.152	Scophthalmus_maximus
ENSCING00000003676	-	88	32.727	ENSSDUG00000017121	eral1	73	33.030	Seriola_dumerili
ENSCING00000003676	-	88	32.927	ENSSLDG00000019349	eral1	73	33.232	Seriola_lalandi_dorsalis
ENSCING00000003676	-	88	33.435	ENSSPAG00000018370	eral1	73	33.435	Stegastes_partitus
ENSCING00000003676	-	90	31.832	ENSSSCG00000017776	ERAL1	74	31.832	Sus_scrofa
ENSCING00000003676	-	87	33.129	ENSTRUG00000000660	eral1	75	31.700	Takifugu_rubripes
ENSCING00000003676	-	75	38.095	ENSTNIG00000008531	eral1	92	43.165	Tetraodon_nigroviridis
ENSCING00000003676	-	83	32.441	ENSTTRG00000004107	ERAL1	67	32.441	Tursiops_truncatus
ENSCING00000003676	-	83	33.557	ENSUAMG00000015904	ERAL1	67	33.557	Ursus_americanus
ENSCING00000003676	-	83	33.557	ENSUMAG00000011679	ERAL1	67	33.557	Ursus_maritimus
ENSCING00000003676	-	74	31.698	ENSVPAG00000006626	ERAL1	70	31.698	Vicugna_pacos
ENSCING00000003676	-	83	34.228	ENSVVUG00000017651	ERAL1	74	32.523	Vulpes_vulpes
ENSCING00000003676	-	92	33.819	ENSXETG00000019633	eral1	87	33.819	Xenopus_tropicalis
ENSCING00000003676	-	89	35.135	ENSXCOG00000005705	eral1	75	35.135	Xiphophorus_couchianus
ENSCING00000003676	-	88	35.866	ENSXMAG00000005455	eral1	74	35.174	Xiphophorus_maculatus