EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000003680 (Gene tree)
Gene ID: 100181450
Gene Symbol: -
Alias: -
Full Name: eukaryotic translation initiation factor 3 subunit D-like
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 4983 bases
Position: chr4:3284946-3289928
Accession: 100181450
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000007610	eIF-3_zeta	PF05091.12	3.4e-208	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000007610	-	2253	-	ENSCINP00000007610	554 (aa)	XP_002126137	F6XIP9

Gene Model

Click here to download ENSCING00000003680's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000003680's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000003680	-	96	65.306	ENSG00000100353	EIF3D	96	65.177	Homo_sapiens
ENSCING00000003680	-	96	65.863	ENSAPOG00000002054	eif3d	98	65.458	Acanthochromis_polyacanthus
ENSCING00000003680	-	96	64.935	ENSAMEG00000009639	EIF3D	96	64.804	Ailuropoda_melanoleuca
ENSCING00000003680	-	96	66.048	ENSACIG00000013847	eif3d	94	65.922	Amphilophus_citrinellus
ENSCING00000003680	-	96	65.863	ENSAOCG00000022455	eif3d	96	65.736	Amphiprion_ocellaris
ENSCING00000003680	-	54	60.328	ENSAOCG00000005916	-	97	60.328	Amphiprion_ocellaris
ENSCING00000003680	-	96	65.863	ENSAPEG00000020361	eif3d	96	65.736	Amphiprion_percula
ENSCING00000003680	-	96	65.492	ENSATEG00000020784	eif3d	96	65.363	Anabas_testudineus
ENSCING00000003680	-	97	58.410	ENSAPLG00000002632	EIF3D	99	58.178	Anas_platyrhynchos
ENSCING00000003680	-	96	65.121	ENSACAG00000016308	EIF3D	96	64.991	Anolis_carolinensis
ENSCING00000003680	-	96	65.306	ENSANAG00000026835	EIF3D	96	65.177	Aotus_nancymaae
ENSCING00000003680	-	96	66.048	ENSACLG00000021167	eif3d	96	65.922	Astatotilapia_calliptera
ENSCING00000003680	-	72	67.654	ENSACLG00000021712	eif3d	77	67.494	Astatotilapia_calliptera
ENSCING00000003680	-	72	67.654	ENSACLG00000021768	EIF3D	81	67.494	Astatotilapia_calliptera
ENSCING00000003680	-	72	67.654	ENSACLG00000021852	eif3d	81	67.494	Astatotilapia_calliptera
ENSCING00000003680	-	72	67.654	ENSACLG00000021430	EIF3D	89	67.494	Astatotilapia_calliptera
ENSCING00000003680	-	96	66.976	ENSAMXG00000017547	eif3d	96	66.853	Astyanax_mexicanus
ENSCING00000003680	-	96	65.121	ENSBTAG00000001988	EIF3D	96	64.991	Bos_taurus
ENSCING00000003680	-	95	46.000	WBGene00001227	eif-3.D	96	46.182	Caenorhabditis_elegans
ENSCING00000003680	-	96	65.306	ENSCJAG00000013831	EIF3D	95	71.134	Callithrix_jacchus
ENSCING00000003680	-	96	64.935	ENSCAFG00000001544	EIF3D	96	64.804	Canis_familiaris
ENSCING00000003680	-	99	64.247	ENSCAFG00020004483	EIF3D	96	64.804	Canis_lupus_dingo
ENSCING00000003680	-	96	65.121	ENSCHIG00000012106	EIF3D	96	64.991	Capra_hircus
ENSCING00000003680	-	96	65.306	ENSTSYG00000008540	EIF3D	95	71.134	Carlito_syrichta
ENSCING00000003680	-	99	63.225	ENSCAPG00000015164	EIF3D	96	63.504	Cavia_aperea
ENSCING00000003680	-	96	65.121	ENSCPOG00000002529	EIF3D	96	64.804	Cavia_porcellus
ENSCING00000003680	-	96	65.306	ENSCCAG00000027331	EIF3D	96	65.177	Cebus_capucinus
ENSCING00000003680	-	96	65.306	ENSCATG00000045003	EIF3D	95	67.401	Cercocebus_atys
ENSCING00000003680	-	99	64.247	ENSCLAG00000016545	EIF3D	98	64.717	Chinchilla_lanigera
ENSCING00000003680	-	99	64.738	ENSCSAG00000007898	EIF3D	99	64.845	Chlorocebus_sabaeus
ENSCING00000003680	-	96	62.942	ENSCHOG00000004811	EIF3D	96	62.804	Choloepus_hoffmanni
ENSCING00000003680	-	96	64.935	ENSCPBG00000016309	EIF3D	97	64.804	Chrysemys_picta_bellii
ENSCING00000003680	-	99	91.444	ENSCSAVG00000001450	-	96	92.052	Ciona_savignyi
ENSCING00000003680	-	96	65.306	ENSCANG00000031179	EIF3D	96	65.177	Colobus_angolensis_palliatus
ENSCING00000003680	-	96	65.121	ENSCGRG00001016584	EIF3D	96	64.991	Cricetulus_griseus_chok1gshd
ENSCING00000003680	-	96	65.121	ENSCGRG00000000302	EIF3D	96	64.991	Cricetulus_griseus_crigri
ENSCING00000003680	-	96	65.863	ENSCSEG00000020548	eif3d	96	65.736	Cynoglossus_semilaevis
ENSCING00000003680	-	77	78.182	ENSCVAG00000001999	eif3d	84	78.182	Cyprinodon_variegatus
ENSCING00000003680	-	96	66.976	ENSDARG00000021257	eif3d	100	80.488	Danio_rerio
ENSCING00000003680	-	53	58.446	ENSDNOG00000018482	EIF3D	92	58.108	Dasypus_novemcinctus
ENSCING00000003680	-	96	65.306	ENSDORG00000010491	Eif3d	96	65.177	Dipodomys_ordii
ENSCING00000003680	-	99	50.178	FBgn0037994	eIF3d2	96	50.000	Drosophila_melanogaster
ENSCING00000003680	-	95	56.822	FBgn0040227	eIF3d1	93	56.822	Drosophila_melanogaster
ENSCING00000003680	-	89	60.111	ENSETEG00000016315	-	98	60.111	Echinops_telfairi
ENSCING00000003680	-	64	52.466	ENSETEG00000020233	-	100	52.466	Echinops_telfairi
ENSCING00000003680	-	92	56.057	ENSETEG00000009404	-	96	55.847	Echinops_telfairi
ENSCING00000003680	-	94	54.991	ENSETEG00000002070	-	99	54.991	Echinops_telfairi
ENSCING00000003680	-	88	64.694	ENSEBUG00000009405	eif3d	92	68.593	Eptatretus_burgeri
ENSCING00000003680	-	96	65.121	ENSEASG00005018906	EIF3D	96	64.991	Equus_asinus_asinus
ENSCING00000003680	-	96	65.492	ENSECAG00000022413	EIF3D	96	65.177	Equus_caballus
ENSCING00000003680	-	96	59.926	ENSEEUG00000015771	EIF3D	96	59.590	Erinaceus_europaeus
ENSCING00000003680	-	96	66.234	ENSELUG00000018698	eif3d	96	66.108	Esox_lucius
ENSCING00000003680	-	99	64.376	ENSFCAG00000001131	EIF3D	98	64.481	Felis_catus
ENSCING00000003680	-	96	64.564	ENSFALG00000013012	EIF3D	96	64.432	Ficedula_albicollis
ENSCING00000003680	-	96	65.121	ENSFDAG00000004352	EIF3D	96	64.991	Fukomys_damarensis
ENSCING00000003680	-	96	63.822	ENSGMOG00000013341	eif3d	97	63.687	Gadus_morhua
ENSCING00000003680	-	96	64.564	ENSGALG00000012529	EIF3D	96	64.432	Gallus_gallus
ENSCING00000003680	-	99	65.530	ENSGACG00000014538	eif3d	96	66.294	Gasterosteus_aculeatus
ENSCING00000003680	-	96	64.935	ENSGAGG00000009617	EIF3D	96	64.804	Gopherus_agassizii
ENSCING00000003680	-	99	64.738	ENSGGOG00000003428	EIF3D	98	64.845	Gorilla_gorilla
ENSCING00000003680	-	96	66.234	ENSHBUG00000017230	eif3d	98	65.840	Haplochromis_burtoni
ENSCING00000003680	-	96	50.369	ENSHGLG00000000135	-	96	49.722	Heterocephalus_glaber_female
ENSCING00000003680	-	96	54.478	ENSHGLG00000006449	-	98	54.120	Heterocephalus_glaber_female
ENSCING00000003680	-	96	65.121	ENSHGLG00000016422	-	96	64.804	Heterocephalus_glaber_female
ENSCING00000003680	-	96	65.121	ENSHGLG00100007477	-	96	64.804	Heterocephalus_glaber_male
ENSCING00000003680	-	96	53.875	ENSHGLG00100001321	-	96	53.247	Heterocephalus_glaber_male
ENSCING00000003680	-	96	54.323	ENSHGLG00100013710	-	97	53.962	Heterocephalus_glaber_male
ENSCING00000003680	-	96	65.677	ENSHCOG00000007799	eif3d	96	65.549	Hippocampus_comes
ENSCING00000003680	-	96	66.419	ENSIPUG00000017267	eif3d	96	66.480	Ictalurus_punctatus
ENSCING00000003680	-	96	65.121	ENSSTOG00000011335	EIF3D	96	64.991	Ictidomys_tridecemlineatus
ENSCING00000003680	-	96	65.121	ENSJJAG00000010854	Eif3d	96	64.991	Jaculus_jaculus
ENSCING00000003680	-	96	65.677	ENSKMAG00000007133	eif3d	96	65.549	Kryptolebias_marmoratus
ENSCING00000003680	-	96	66.048	ENSLBEG00000005296	eif3d	96	65.922	Labrus_bergylta
ENSCING00000003680	-	96	63.636	ENSLACG00000001606	EIF3D	94	63.501	Latimeria_chalumnae
ENSCING00000003680	-	99	64.014	ENSLAFG00000001714	EIF3D	96	64.618	Loxodonta_africana
ENSCING00000003680	-	96	65.306	ENSMFAG00000000481	EIF3D	95	71.134	Macaca_fascicularis
ENSCING00000003680	-	96	65.306	ENSMMUG00000012754	EIF3D	95	66.245	Macaca_mulatta
ENSCING00000003680	-	96	65.306	ENSMNEG00000012843	EIF3D	95	71.134	Macaca_nemestrina
ENSCING00000003680	-	96	65.306	ENSMLEG00000037251	EIF3D	95	71.134	Mandrillus_leucophaeus
ENSCING00000003680	-	96	65.863	ENSMAMG00000020219	eif3d	96	65.736	Mastacembelus_armatus
ENSCING00000003680	-	96	66.234	ENSMZEG00005023294	eif3d	96	66.108	Maylandia_zebra
ENSCING00000003680	-	96	63.451	ENSMZEG00005024006	eif3d	96	63.315	Maylandia_zebra
ENSCING00000003680	-	55	60.328	ENSMGAG00000012653	EIF3D	100	60.000	Meleagris_gallopavo
ENSCING00000003680	-	96	65.121	ENSMAUG00000013161	Eif3d	96	64.991	Mesocricetus_auratus
ENSCING00000003680	-	96	65.121	ENSMICG00000012161	EIF3D	95	71.134	Microcebus_murinus
ENSCING00000003680	-	96	65.121	ENSMOCG00000011605	Eif3d	96	64.991	Microtus_ochrogaster
ENSCING00000003680	-	96	65.306	ENSMMOG00000021496	eif3d	96	65.177	Mola_mola
ENSCING00000003680	-	96	64.750	ENSMODG00000000821	EIF3D	96	64.618	Monodelphis_domestica
ENSCING00000003680	-	96	65.492	ENSMALG00000019436	eif3d	96	65.363	Monopterus_albus
ENSCING00000003680	-	96	65.121	MGP_CAROLIEiJ_G0019973	Eif3d	96	64.991	Mus_caroli
ENSCING00000003680	-	96	65.121	ENSMUSG00000016554	Eif3d	96	64.991	Mus_musculus
ENSCING00000003680	-	96	65.121	MGP_PahariEiJ_G0019975	Eif3d	96	64.991	Mus_pahari
ENSCING00000003680	-	96	65.121	MGP_SPRETEiJ_G0020871	Eif3d	96	64.991	Mus_spretus
ENSCING00000003680	-	81	44.515	ENSMPUG00000012581	EIF3D	100	44.304	Mustela_putorius_furo
ENSCING00000003680	-	96	65.121	ENSMLUG00000015857	EIF3D	96	64.991	Myotis_lucifugus
ENSCING00000003680	-	96	64.935	ENSNGAG00000012038	Eif3d	96	64.804	Nannospalax_galili
ENSCING00000003680	-	96	65.306	ENSNLEG00000014560	EIF3D	95	71.134	Nomascus_leucogenys
ENSCING00000003680	-	96	64.564	ENSMEUG00000004561	EIF3D	97	64.022	Notamacropus_eugenii
ENSCING00000003680	-	86	60.996	ENSOPRG00000006924	EIF3D	96	60.833	Ochotona_princeps
ENSCING00000003680	-	96	65.121	ENSODEG00000011039	EIF3D	96	64.804	Octodon_degus
ENSCING00000003680	-	96	66.048	ENSONIG00000009713	eif3d	96	65.922	Oreochromis_niloticus
ENSCING00000003680	-	97	56.859	ENSOANG00000007483	EIF3D	99	56.624	Ornithorhynchus_anatinus
ENSCING00000003680	-	96	65.121	ENSOCUG00000006363	EIF3D	96	64.991	Oryctolagus_cuniculus
ENSCING00000003680	-	97	64.630	ENSORLG00000001449	eif3d	97	64.652	Oryzias_latipes
ENSCING00000003680	-	53	59.797	ENSORLG00020013943	eif3d	99	59.076	Oryzias_latipes_hni
ENSCING00000003680	-	96	65.121	ENSORLG00020000383	eif3d	95	64.991	Oryzias_latipes_hni
ENSCING00000003680	-	56	58.065	ENSORLG00015006954	eif3d	99	58.065	Oryzias_latipes_hsok
ENSCING00000003680	-	53	60.473	ENSORLG00015006930	eif3d	90	60.473	Oryzias_latipes_hsok
ENSCING00000003680	-	53	56.757	ENSOMEG00000017372	eif3d	95	56.757	Oryzias_melastigma
ENSCING00000003680	-	53	58.784	ENSOMEG00000017337	eif3d	95	58.784	Oryzias_melastigma
ENSCING00000003680	-	96	65.121	ENSOGAG00000002978	EIF3D	96	64.991	Otolemur_garnettii
ENSCING00000003680	-	96	65.121	ENSOARG00000018926	EIF3D	96	64.991	Ovis_aries
ENSCING00000003680	-	96	65.306	ENSPPAG00000031183	EIF3D	96	65.177	Pan_paniscus
ENSCING00000003680	-	96	64.935	ENSPPRG00000007244	EIF3D	96	64.804	Panthera_pardus
ENSCING00000003680	-	96	63.822	ENSPTIG00000012272	EIF3D	96	63.687	Panthera_tigris_altaica
ENSCING00000003680	-	96	65.306	ENSPTRG00000014313	EIF3D	96	65.177	Pan_troglodytes
ENSCING00000003680	-	96	65.306	ENSPANG00000023980	EIF3D	95	66.667	Papio_anubis
ENSCING00000003680	-	96	66.048	ENSPKIG00000013892	eif3d	96	65.922	Paramormyrops_kingsleyae
ENSCING00000003680	-	96	65.306	ENSPSIG00000010983	EIF3D	96	65.177	Pelodiscus_sinensis
ENSCING00000003680	-	95	61.509	ENSPMGG00000004524	eif3d	99	61.509	Periophthalmus_magnuspinnatus
ENSCING00000003680	-	96	65.121	ENSPEMG00000014069	Eif3d	96	64.991	Peromyscus_maniculatus_bairdii
ENSCING00000003680	-	53	60.269	ENSPMAG00000008165	eif3d	97	59.259	Petromyzon_marinus
ENSCING00000003680	-	96	64.935	ENSPCIG00000021563	EIF3D	96	64.804	Phascolarctos_cinereus
ENSCING00000003680	-	96	66.419	ENSPFOG00000007516	eif3d	96	66.294	Poecilia_formosa
ENSCING00000003680	-	96	66.419	ENSPLAG00000015253	eif3d	96	66.294	Poecilia_latipinna
ENSCING00000003680	-	96	66.605	ENSPMEG00000019987	eif3d	96	66.480	Poecilia_mexicana
ENSCING00000003680	-	99	58.590	ENSPPYG00000011774	EIF3D	99	58.652	Pongo_abelii
ENSCING00000003680	-	84	80.952	ENSPCAG00000007788	EIF3D	83	80.645	Procavia_capensis
ENSCING00000003680	-	96	62.523	ENSPCOG00000014552	EIF3D	96	62.570	Propithecus_coquereli
ENSCING00000003680	-	96	65.306	ENSPVAG00000002014	EIF3D	96	65.177	Pteropus_vampyrus
ENSCING00000003680	-	96	66.419	ENSPNYG00000011917	eif3d	96	66.294	Pundamilia_nyererei
ENSCING00000003680	-	96	66.790	ENSPNAG00000000176	eif3d	96	66.667	Pygocentrus_nattereri
ENSCING00000003680	-	96	65.121	ENSRNOG00000005804	Eif3d	96	64.991	Rattus_norvegicus
ENSCING00000003680	-	96	65.306	ENSRBIG00000041563	EIF3D	95	71.134	Rhinopithecus_bieti
ENSCING00000003680	-	96	65.306	ENSRROG00000039588	EIF3D	95	71.134	Rhinopithecus_roxellana
ENSCING00000003680	-	96	65.306	ENSSBOG00000032811	EIF3D	96	65.177	Saimiri_boliviensis_boliviensis
ENSCING00000003680	-	96	64.750	ENSSHAG00000011209	EIF3D	96	64.618	Sarcophilus_harrisii
ENSCING00000003680	-	96	66.605	ENSSFOG00015023800	eif3d	96	66.294	Scleropages_formosus
ENSCING00000003680	-	96	66.048	ENSSMAG00000013962	eif3d	95	70.283	Scophthalmus_maximus
ENSCING00000003680	-	96	65.306	ENSSDUG00000023224	eif3d	96	65.177	Seriola_dumerili
ENSCING00000003680	-	96	65.306	ENSSLDG00000006833	eif3d	96	65.177	Seriola_lalandi_dorsalis
ENSCING00000003680	-	86	59.129	ENSSARG00000012488	EIF3D	85	69.767	Sorex_araneus
ENSCING00000003680	-	96	64.750	ENSSPUG00000011683	EIF3D	96	64.618	Sphenodon_punctatus
ENSCING00000003680	-	96	65.677	ENSSPAG00000003591	eif3d	96	65.549	Stegastes_partitus
ENSCING00000003680	-	96	65.121	ENSSSCG00000000141	EIF3D	96	64.991	Sus_scrofa
ENSCING00000003680	-	96	64.378	ENSTGUG00000010728	EIF3D	96	64.246	Taeniopygia_guttata
ENSCING00000003680	-	96	66.234	ENSTRUG00000007886	eif3d	96	66.108	Takifugu_rubripes
ENSCING00000003680	-	99	64.516	ENSTNIG00000011263	eif3d	96	65.613	Tetraodon_nigroviridis
ENSCING00000003680	-	89	64.257	ENSTBEG00000006268	EIF3D	96	64.113	Tupaia_belangeri
ENSCING00000003680	-	96	64.750	ENSTTRG00000006637	EIF3D	96	64.618	Tursiops_truncatus
ENSCING00000003680	-	99	64.247	ENSUAMG00000017485	EIF3D	98	64.717	Ursus_americanus
ENSCING00000003680	-	96	64.935	ENSUMAG00000015827	EIF3D	96	64.804	Ursus_maritimus
ENSCING00000003680	-	53	53.691	ENSVPAG00000000359	-	100	53.356	Vicugna_pacos
ENSCING00000003680	-	99	64.247	ENSVVUG00000023578	EIF3D	96	64.804	Vulpes_vulpes
ENSCING00000003680	-	96	63.822	ENSXETG00000027259	eif3d	96	63.687	Xenopus_tropicalis
ENSCING00000003680	-	96	63.993	ENSXCOG00000011633	eif3d	96	63.483	Xiphophorus_couchianus
ENSCING00000003680	-	96	66.605	ENSXMAG00000000954	eif3d	96	66.480	Xiphophorus_maculatus