EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000003770 (Gene tree)
Gene ID: 100175681
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 23084 bases
Position: chr5:978100-1001183
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000007792	Dus	PF01207.17	2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000007792	-	3124	-	ENSCINP00000007792	1024 (aa)	-	F6TIR0

Gene Model

Click here to download ENSCING00000003770's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin00240	Pyrimidine metabolism	KEGG
cin00410	beta-Alanine metabolism	KEGG
cin00770	Pantothenate and CoA biosynthesis	KEGG
cin00983	Drug metabolism - other enzymes	KEGG
cin01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000003770's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000003770	-	99	71.722	ENSG00000188641	DPYD	92	80.000	Homo_sapiens
ENSCING00000003770	-	99	71.569	ENSAPOG00000009496	dpydb	99	71.569	Acanthochromis_polyacanthus
ENSCING00000003770	-	99	70.265	ENSAMEG00000016662	DPYD	99	70.265	Ailuropoda_melanoleuca
ENSCING00000003770	-	99	69.608	ENSACIG00000001318	dpydb	99	69.608	Amphilophus_citrinellus
ENSCING00000003770	-	99	71.373	ENSAOCG00000015840	dpydb	99	71.373	Amphiprion_ocellaris
ENSCING00000003770	-	99	71.176	ENSAPEG00000010459	dpydb	99	71.176	Amphiprion_percula
ENSCING00000003770	-	99	71.554	ENSATEG00000002731	dpydb	99	71.554	Anabas_testudineus
ENSCING00000003770	-	78	73.566	ENSAPLG00000012045	DPYD	100	73.566	Anas_platyrhynchos
ENSCING00000003770	-	99	72.576	ENSACAG00000005513	DPYD	99	72.576	Anolis_carolinensis
ENSCING00000003770	-	99	71.569	ENSANAG00000036723	DPYD	99	71.569	Aotus_nancymaae
ENSCING00000003770	-	98	70.466	ENSACLG00000001822	dpydb	99	70.466	Astatotilapia_calliptera
ENSCING00000003770	-	99	71.933	ENSAMXG00000000135	dpyda.3	99	71.933	Astyanax_mexicanus
ENSCING00000003770	-	99	71.176	ENSBTAG00000031358	DPYD	99	71.176	Bos_taurus
ENSCING00000003770	-	99	71.037	ENSCJAG00000018179	DPYD	99	71.037	Callithrix_jacchus
ENSCING00000003770	-	97	70.641	ENSCAFG00000020062	DPYD	96	70.641	Canis_familiaris
ENSCING00000003770	-	99	70.519	ENSCAFG00020011809	DPYD	99	70.519	Canis_lupus_dingo
ENSCING00000003770	-	99	72.157	ENSCHIG00000016223	DPYD	99	72.157	Capra_hircus
ENSCING00000003770	-	72	76.280	ENSTSYG00000003615	DPYD	90	76.280	Carlito_syrichta
ENSCING00000003770	-	99	71.443	ENSCPOG00000003769	DPYD	99	71.443	Cavia_porcellus
ENSCING00000003770	-	95	71.619	ENSCCAG00000003997	DPYD	97	71.619	Cebus_capucinus
ENSCING00000003770	-	99	71.782	ENSCATG00000033708	DPYD	99	71.765	Cercocebus_atys
ENSCING00000003770	-	99	71.386	ENSCLAG00000009825	DPYD	99	71.386	Chinchilla_lanigera
ENSCING00000003770	-	99	71.667	ENSCSAG00000001495	DPYD	99	71.667	Chlorocebus_sabaeus
ENSCING00000003770	-	56	70.979	ENSCPBG00000011421	-	88	70.979	Chrysemys_picta_bellii
ENSCING00000003770	-	100	85.214	ENSCSAVG00000004040	-	100	85.421	Ciona_savignyi
ENSCING00000003770	-	99	71.722	ENSCANG00000042296	DPYD	99	71.722	Colobus_angolensis_palliatus
ENSCING00000003770	-	99	71.401	ENSCSEG00000017980	dpydb	99	71.401	Cynoglossus_semilaevis
ENSCING00000003770	-	99	72.016	ENSCVAG00000017559	dpydb	99	72.016	Cyprinodon_variegatus
ENSCING00000003770	-	99	70.813	ENSDARG00000010267	dpydb	99	70.855	Danio_rerio
ENSCING00000003770	-	68	68.616	ENSDARG00000086853	dpyda.3	99	68.616	Danio_rerio
ENSCING00000003770	-	68	70.085	ENSDNOG00000012556	DPYD	99	70.085	Dasypus_novemcinctus
ENSCING00000003770	-	99	69.872	ENSDORG00000007418	Dpyd	99	69.872	Dipodomys_ordii
ENSCING00000003770	-	99	64.694	FBgn0086450	su(r)	98	64.694	Drosophila_melanogaster
ENSCING00000003770	-	99	64.020	ENSEBUG00000015615	-	98	64.020	Eptatretus_burgeri
ENSCING00000003770	-	99	71.570	ENSEASG00005015723	DPYD	98	71.570	Equus_asinus_asinus
ENSCING00000003770	-	99	71.765	ENSECAG00000010881	DPYD	99	73.386	Equus_caballus
ENSCING00000003770	-	99	70.829	ENSELUG00000002581	dpyda.3	99	70.829	Esox_lucius
ENSCING00000003770	-	99	70.784	ENSFCAG00000039421	DPYD	99	70.784	Felis_catus
ENSCING00000003770	-	99	71.893	ENSFALG00000002389	DPYD	99	71.893	Ficedula_albicollis
ENSCING00000003770	-	99	70.392	ENSFDAG00000009322	DPYD	99	70.392	Fukomys_damarensis
ENSCING00000003770	-	99	72.031	ENSFHEG00000001338	dpydb	99	72.031	Fundulus_heteroclitus
ENSCING00000003770	-	98	69.535	ENSGMOG00000008152	dpydb	99	70.030	Gadus_morhua
ENSCING00000003770	-	99	71.541	ENSGALG00000005509	DPYD	99	71.746	Gallus_gallus
ENSCING00000003770	-	99	71.078	ENSGAFG00000006907	dpydb	99	71.078	Gambusia_affinis
ENSCING00000003770	-	99	71.050	ENSGACG00000014875	dpydb	99	71.050	Gasterosteus_aculeatus
ENSCING00000003770	-	86	73.007	ENSGAGG00000009437	DPYD	99	73.486	Gopherus_agassizii
ENSCING00000003770	-	99	70.882	ENSHGLG00100009197	DPYD	99	70.882	Heterocephalus_glaber_male
ENSCING00000003770	-	99	71.176	ENSHCOG00000015737	dpydb	99	71.176	Hippocampus_comes
ENSCING00000003770	-	99	71.541	ENSIPUG00000009281	dpyd	99	71.541	Ictalurus_punctatus
ENSCING00000003770	-	99	65.751	ENSSTOG00000008412	DPYD	99	65.751	Ictidomys_tridecemlineatus
ENSCING00000003770	-	72	68.336	ENSJJAG00000023195	Dpyd	96	68.336	Jaculus_jaculus
ENSCING00000003770	-	99	70.784	ENSKMAG00000009544	dpydb	99	70.784	Kryptolebias_marmoratus
ENSCING00000003770	-	99	70.939	ENSLBEG00000021005	dpydb	99	70.939	Labrus_bergylta
ENSCING00000003770	-	99	71.918	ENSLOCG00000008253	dpydb	99	71.918	Lepisosteus_oculatus
ENSCING00000003770	-	99	71.667	ENSLAFG00000001798	DPYD	99	71.667	Loxodonta_africana
ENSCING00000003770	-	99	71.980	ENSMFAG00000033409	DPYD	99	71.961	Macaca_fascicularis
ENSCING00000003770	-	99	71.961	ENSMMUG00000020726	DPYD	99	71.961	Macaca_mulatta
ENSCING00000003770	-	99	71.863	ENSMNEG00000028972	DPYD	99	71.863	Macaca_nemestrina
ENSCING00000003770	-	99	71.765	ENSMLEG00000031938	DPYD	99	71.765	Mandrillus_leucophaeus
ENSCING00000003770	-	99	69.216	ENSMAMG00000011621	dpydb	99	70.473	Mastacembelus_armatus
ENSCING00000003770	-	99	71.512	ENSMZEG00005010698	dpydb	99	71.512	Maylandia_zebra
ENSCING00000003770	-	78	70.037	ENSMGAG00000007264	DPYD	100	70.037	Meleagris_gallopavo
ENSCING00000003770	-	99	71.050	ENSMICG00000003295	DPYD	99	71.050	Microcebus_murinus
ENSCING00000003770	-	99	71.835	ENSMOCG00000019630	Dpyd	99	71.835	Microtus_ochrogaster
ENSCING00000003770	-	99	70.784	ENSMODG00000004065	DPYD	99	70.784	Monodelphis_domestica
ENSCING00000003770	-	99	69.126	ENSMALG00000004541	dpydb	99	69.126	Monopterus_albus
ENSCING00000003770	-	99	70.658	MGP_CAROLIEiJ_G0025580	Dpyd	99	70.658	Mus_caroli
ENSCING00000003770	-	99	70.756	ENSMUSG00000033308	Dpyd	99	70.756	Mus_musculus
ENSCING00000003770	-	99	70.363	MGP_PahariEiJ_G0027026	Dpyd	99	70.363	Mus_pahari
ENSCING00000003770	-	99	70.854	MGP_SPRETEiJ_G0026531	Dpyd	99	70.854	Mus_spretus
ENSCING00000003770	-	99	69.872	ENSMPUG00000003278	DPYD	99	69.872	Mustela_putorius_furo
ENSCING00000003770	-	63	69.518	ENSMLUG00000006629	-	99	69.518	Myotis_lucifugus
ENSCING00000003770	-	99	71.344	ENSNGAG00000010583	Dpyd	99	71.344	Nannospalax_galili
ENSCING00000003770	-	68	62.340	ENSNBRG00000001729	dpydb	99	62.340	Neolamprologus_brichardi
ENSCING00000003770	-	99	71.722	ENSNLEG00000011315	DPYD	99	71.722	Nomascus_leucogenys
ENSCING00000003770	-	62	74.737	ENSOPRG00000000478	-	68	80.769	Ochotona_princeps
ENSCING00000003770	-	99	71.471	ENSODEG00000006033	DPYD	99	71.471	Octodon_degus
ENSCING00000003770	-	99	71.024	ENSONIG00000016599	dpydb	99	73.162	Oreochromis_niloticus
ENSCING00000003770	-	99	71.639	ENSOCUG00000008610	DPYD	99	71.639	Oryctolagus_cuniculus
ENSCING00000003770	-	99	71.275	ENSORLG00000013626	dpydb	99	71.275	Oryzias_latipes
ENSCING00000003770	-	99	71.275	ENSORLG00020019867	dpydb	99	71.275	Oryzias_latipes_hni
ENSCING00000003770	-	99	71.373	ENSORLG00015020667	dpydb	99	71.373	Oryzias_latipes_hsok
ENSCING00000003770	-	99	70.980	ENSOMEG00000017058	dpydb	99	70.980	Oryzias_melastigma
ENSCING00000003770	-	99	71.373	ENSOGAG00000000167	DPYD	99	71.373	Otolemur_garnettii
ENSCING00000003770	-	99	72.157	ENSOARG00000017549	DPYD	99	72.157	Ovis_aries
ENSCING00000003770	-	99	71.640	ENSPPAG00000041846	DPYD	98	73.174	Pan_paniscus
ENSCING00000003770	-	99	70.980	ENSPPRG00000023415	DPYD	99	70.980	Panthera_pardus
ENSCING00000003770	-	99	71.739	ENSPTRG00000000990	DPYD	99	71.722	Pan_troglodytes
ENSCING00000003770	-	99	71.667	ENSPANG00000001230	DPYD	99	71.667	Papio_anubis
ENSCING00000003770	-	99	69.638	ENSPKIG00000008228	dpydb	99	69.638	Paramormyrops_kingsleyae
ENSCING00000003770	-	92	71.852	ENSPSIG00000007676	DPYD	99	71.958	Pelodiscus_sinensis
ENSCING00000003770	-	99	71.443	ENSPEMG00000012380	Dpyd	99	71.443	Peromyscus_maniculatus_bairdii
ENSCING00000003770	-	99	71.373	ENSPFOG00000005785	dpydb	99	71.373	Poecilia_formosa
ENSCING00000003770	-	99	71.373	ENSPLAG00000023274	dpydb	99	71.373	Poecilia_latipinna
ENSCING00000003770	-	99	71.275	ENSPMEG00000005703	dpydb	99	71.275	Poecilia_mexicana
ENSCING00000003770	-	99	71.078	ENSPREG00000014688	dpydb	99	71.078	Poecilia_reticulata
ENSCING00000003770	-	99	71.135	ENSPPYG00000001131	DPYD	99	71.135	Pongo_abelii
ENSCING00000003770	-	85	79.747	ENSPCAG00000000987	DPYD	90	79.747	Procavia_capensis
ENSCING00000003770	-	92	68.757	ENSPCOG00000003302	DPYD	99	68.757	Propithecus_coquereli
ENSCING00000003770	-	99	71.610	ENSPNYG00000012672	dpydb	99	71.610	Pundamilia_nyererei
ENSCING00000003770	-	99	71.443	ENSPNAG00000021996	dpyda.3	99	71.443	Pygocentrus_nattereri
ENSCING00000003770	-	92	68.360	ENSRNOG00000017105	Dpyd	98	69.772	Rattus_norvegicus
ENSCING00000003770	-	99	69.102	ENSRBIG00000035171	DPYD	98	69.102	Rhinopithecus_bieti
ENSCING00000003770	-	50	70.980	ENSRROG00000031813	-	98	70.980	Rhinopithecus_roxellana
ENSCING00000003770	-	92	71.459	ENSSBOG00000020116	DPYD	99	71.459	Saimiri_boliviensis_boliviensis
ENSCING00000003770	-	99	70.715	ENSSHAG00000016972	DPYD	99	70.715	Sarcophilus_harrisii
ENSCING00000003770	-	99	69.882	ENSSFOG00015008674	dpydb	99	69.882	Scleropages_formosus
ENSCING00000003770	-	99	69.612	ENSSMAG00000001180	dpydb	99	69.902	Scophthalmus_maximus
ENSCING00000003770	-	99	70.136	ENSSDUG00000013875	dpydb	99	70.136	Seriola_dumerili
ENSCING00000003770	-	92	72.872	ENSSARG00000010936	DPYD	92	72.872	Sorex_araneus
ENSCING00000003770	-	98	70.100	ENSSPAG00000006467	dpydb	99	70.100	Stegastes_partitus
ENSCING00000003770	-	99	71.176	ENSSSCG00000006878	DPYD	99	71.176	Sus_scrofa
ENSCING00000003770	-	89	71.507	ENSTGUG00000005495	DPYD	99	71.507	Taeniopygia_guttata
ENSCING00000003770	-	99	69.510	ENSTRUG00000003040	dpydb	99	69.736	Takifugu_rubripes
ENSCING00000003770	-	99	70.088	ENSTNIG00000005550	dpydb	99	70.088	Tetraodon_nigroviridis
ENSCING00000003770	-	99	67.353	ENSTTRG00000008953	DPYD	99	67.353	Tursiops_truncatus
ENSCING00000003770	-	92	70.370	ENSUMAG00000008909	DPYD	99	70.370	Ursus_maritimus
ENSCING00000003770	-	97	70.641	ENSVVUG00000021876	DPYD	99	70.719	Vulpes_vulpes
ENSCING00000003770	-	92	65.158	ENSXETG00000008600	DPYD	99	65.158	Xenopus_tropicalis
ENSCING00000003770	-	99	70.617	ENSXCOG00000008010	dpydb	99	70.617	Xiphophorus_couchianus
ENSCING00000003770	-	99	70.715	ENSXMAG00000018645	dpydb	99	70.715	Xiphophorus_maculatus