EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000003788 (Gene tree)
Gene ID: 100180366
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 1903 bases
Position: chr5:959623-961525
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000007805	2OG-FeII_Oxy_2	PF13532.6	2.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000007805	-	972	-	ENSCINP00000007805	248 (aa)	-	F7AW28

Gene Model

Click here to download ENSCING00000003788's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000003788's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000003788	-	72	43.017	ENSG00000125652	ALKBH7	93	44.295	Homo_sapiens
ENSCING00000003788	-	56	47.101	ENSAPOG00000007277	alkbh7	96	47.101	Acanthochromis_polyacanthus
ENSCING00000003788	-	74	43.716	ENSAMEG00000006925	ALKBH7	81	43.716	Ailuropoda_melanoleuca
ENSCING00000003788	-	75	43.850	ENSACAG00000015548	ALKBH7	92	43.850	Anolis_carolinensis
ENSCING00000003788	-	73	43.889	ENSANAG00000035316	ALKBH7	81	43.889	Aotus_nancymaae
ENSCING00000003788	-	73	43.889	ENSBTAG00000025540	ALKBH7	81	43.889	Bos_taurus
ENSCING00000003788	-	69	41.279	WBGene00012920	Y46G5A.35	76	41.279	Caenorhabditis_elegans
ENSCING00000003788	-	72	43.575	ENSCJAG00000016691	ALKBH7	94	44.966	Callithrix_jacchus
ENSCING00000003788	-	72	44.693	ENSCAFG00000018693	ALKBH7	81	44.693	Canis_familiaris
ENSCING00000003788	-	72	44.693	ENSCAFG00020019096	ALKBH7	81	44.693	Canis_lupus_dingo
ENSCING00000003788	-	68	44.379	ENSCHIG00000024761	ALKBH7	81	43.575	Capra_hircus
ENSCING00000003788	-	60	45.270	ENSTSYG00000026277	ALKBH7	93	45.270	Carlito_syrichta
ENSCING00000003788	-	60	48.322	ENSCAPG00000010286	ALKBH7	97	48.322	Cavia_aperea
ENSCING00000003788	-	73	46.111	ENSCPOG00000013958	ALKBH7	81	46.111	Cavia_porcellus
ENSCING00000003788	-	72	43.017	ENSCCAG00000025999	ALKBH7	81	43.017	Cebus_capucinus
ENSCING00000003788	-	73	43.889	ENSCATG00000030199	ALKBH7	94	45.333	Cercocebus_atys
ENSCING00000003788	-	73	45.556	ENSCLAG00000017244	ALKBH7	81	45.556	Chinchilla_lanigera
ENSCING00000003788	-	72	43.575	ENSCSAG00000009674	ALKBH7	81	43.575	Chlorocebus_sabaeus
ENSCING00000003788	-	58	47.552	ENSCPBG00000005256	ALKBH7	85	47.552	Chrysemys_picta_bellii
ENSCING00000003788	-	100	64.542	ENSCSAVG00000004377	-	100	64.542	Ciona_savignyi
ENSCING00000003788	-	60	44.595	ENSCANG00000032503	ALKBH7	93	44.295	Colobus_angolensis_palliatus
ENSCING00000003788	-	72	44.134	ENSCGRG00001019380	Alkbh7	81	44.134	Cricetulus_griseus_chok1gshd
ENSCING00000003788	-	60	45.638	ENSCGRG00000005364	Alkbh7	93	45.638	Cricetulus_griseus_crigri
ENSCING00000003788	-	71	44.068	ENSCSEG00000013396	alkbh7	75	44.571	Cynoglossus_semilaevis
ENSCING00000003788	-	72	43.017	ENSDNOG00000005049	ALKBH7	81	43.017	Dasypus_novemcinctus
ENSCING00000003788	-	72	44.134	ENSDORG00000002441	Alkbh7	80	44.134	Dipodomys_ordii
ENSCING00000003788	-	71	45.763	ENSETEG00000019330	ALKBH7	82	45.763	Echinops_telfairi
ENSCING00000003788	-	68	48.521	ENSEBUG00000005766	alkbh7	76	48.521	Eptatretus_burgeri
ENSCING00000003788	-	67	45.509	ENSECAG00000023627	ALKBH7	81	44.693	Equus_caballus
ENSCING00000003788	-	68	46.154	ENSFCAG00000012510	ALKBH7	81	45.251	Felis_catus
ENSCING00000003788	-	73	46.111	ENSFDAG00000014965	ALKBH7	81	46.111	Fukomys_damarensis
ENSCING00000003788	-	53	49.242	ENSGAGG00000023239	ALKBH7	91	49.242	Gopherus_agassizii
ENSCING00000003788	-	60	44.595	ENSGGOG00000027915	ALKBH7	93	44.295	Gorilla_gorilla
ENSCING00000003788	-	86	42.523	ENSHGLG00000018436	ALKBH7	93	42.523	Heterocephalus_glaber_female
ENSCING00000003788	-	72	46.067	ENSHGLG00100000746	ALKBH7	98	46.067	Heterocephalus_glaber_male
ENSCING00000003788	-	67	46.108	ENSSTOG00000002368	ALKBH7	81	45.251	Ictidomys_tridecemlineatus
ENSCING00000003788	-	72	43.575	ENSJJAG00000023908	Alkbh7	84	43.575	Jaculus_jaculus
ENSCING00000003788	-	84	40.191	ENSKMAG00000001132	alkbh7	92	40.191	Kryptolebias_marmoratus
ENSCING00000003788	-	68	50.000	ENSLACG00000008513	ALKBH7	73	50.000	Latimeria_chalumnae
ENSCING00000003788	-	72	44.693	ENSLAFG00000003852	ALKBH7	81	44.693	Loxodonta_africana
ENSCING00000003788	-	72	43.017	ENSMFAG00000045978	ALKBH7	93	44.295	Macaca_fascicularis
ENSCING00000003788	-	72	43.575	ENSMMUG00000000054	ALKBH7	93	44.966	Macaca_mulatta
ENSCING00000003788	-	72	43.575	ENSMNEG00000029223	ALKBH7	93	44.966	Macaca_nemestrina
ENSCING00000003788	-	60	44.966	ENSMLEG00000039193	ALKBH7	93	44.966	Mandrillus_leucophaeus
ENSCING00000003788	-	68	46.154	ENSMAUG00000000800	Alkbh7	81	44.693	Mesocricetus_auratus
ENSCING00000003788	-	72	44.134	ENSMICG00000006288	ALKBH7	81	44.134	Microcebus_murinus
ENSCING00000003788	-	71	44.068	ENSMOCG00000004923	Alkbh7	80	44.068	Microtus_ochrogaster
ENSCING00000003788	-	68	45.562	MGP_CAROLIEiJ_G0021797	Alkbh7	80	44.068	Mus_caroli
ENSCING00000003788	-	68	45.562	ENSMUSG00000002661	Alkbh7	80	44.068	Mus_musculus
ENSCING00000003788	-	68	46.154	MGP_PahariEiJ_G0020786	Alkbh7	80	44.633	Mus_pahari
ENSCING00000003788	-	68	46.154	MGP_SPRETEiJ_G0022708	Alkbh7	80	44.633	Mus_spretus
ENSCING00000003788	-	69	44.186	ENSMLUG00000015076	-	82	43.407	Myotis_lucifugus
ENSCING00000003788	-	68	46.154	ENSNGAG00000018037	Alkbh7	77	46.154	Nannospalax_galili
ENSCING00000003788	-	57	44.681	ENSMEUG00000006486	ALKBH7	96	44.681	Notamacropus_eugenii
ENSCING00000003788	-	73	46.667	ENSODEG00000015141	ALKBH7	81	46.667	Octodon_degus
ENSCING00000003788	-	68	45.562	ENSOCUG00000006905	ALKBH7	77	45.562	Oryctolagus_cuniculus
ENSCING00000003788	-	83	42.029	ENSORLG00000018765	alkbh7	90	42.029	Oryzias_latipes
ENSCING00000003788	-	83	41.546	ENSORLG00020014461	alkbh7	93	45.714	Oryzias_latipes_hni
ENSCING00000003788	-	83	40.976	ENSORLG00015004045	alkbh7	89	40.976	Oryzias_latipes_hsok
ENSCING00000003788	-	72	44.693	ENSOGAG00000030625	ALKBH7	81	44.693	Otolemur_garnettii
ENSCING00000003788	-	68	43.195	ENSOARG00000006195	ALKBH7	79	42.458	Ovis_aries
ENSCING00000003788	-	72	43.017	ENSPPAG00000028564	ALKBH7	93	44.295	Pan_paniscus
ENSCING00000003788	-	68	46.154	ENSPPRG00000007447	ALKBH7	81	45.251	Panthera_pardus
ENSCING00000003788	-	72	43.017	ENSPTRG00000010360	ALKBH7	93	44.295	Pan_troglodytes
ENSCING00000003788	-	73	43.889	ENSPANG00000035776	ALKBH7	94	45.333	Papio_anubis
ENSCING00000003788	-	56	49.275	ENSPSIG00000007204	ALKBH7	100	49.275	Pelodiscus_sinensis
ENSCING00000003788	-	57	44.366	ENSPMGG00000022473	alkbh7	97	44.366	Periophthalmus_magnuspinnatus
ENSCING00000003788	-	72	44.693	ENSPEMG00000016536	Alkbh7	81	44.693	Peromyscus_maniculatus_bairdii
ENSCING00000003788	-	56	46.377	ENSPREG00000000807	alkbh7	87	46.377	Poecilia_reticulata
ENSCING00000003788	-	60	44.295	ENSPPYG00000009450	ALKBH7	74	44.295	Pongo_abelii
ENSCING00000003788	-	68	46.154	ENSPCAG00000009325	ALKBH7	78	46.154	Procavia_capensis
ENSCING00000003788	-	72	44.693	ENSPCOG00000028026	ALKBH7	81	44.693	Propithecus_coquereli
ENSCING00000003788	-	73	45.000	ENSPVAG00000007246	ALKBH7	81	45.000	Pteropus_vampyrus
ENSCING00000003788	-	68	45.562	ENSRNOG00000047089	Alkbh7	80	44.068	Rattus_norvegicus
ENSCING00000003788	-	60	44.295	ENSRBIG00000042737	ALKBH7	93	44.295	Rhinopithecus_bieti
ENSCING00000003788	-	72	39.665	ENSRROG00000043210	ALKBH7	96	44.595	Rhinopithecus_roxellana
ENSCING00000003788	-	72	43.017	ENSSBOG00000024563	ALKBH7	81	43.017	Saimiri_boliviensis_boliviensis
ENSCING00000003788	-	74	43.716	ENSSARG00000011291	-	83	43.716	Sorex_araneus
ENSCING00000003788	-	59	44.521	ENSSARG00000001361	-	90	42.604	Sorex_araneus
ENSCING00000003788	-	70	46.552	ENSSPUG00000016435	ALKBH7	96	46.552	Sphenodon_punctatus
ENSCING00000003788	-	72	44.134	ENSSSCG00000024254	ALKBH7	74	44.134	Sus_scrofa
ENSCING00000003788	-	60	46.622	ENSTBEG00000005798	ALKBH7	97	46.622	Tupaia_belangeri
ENSCING00000003788	-	74	45.355	ENSTTRG00000010344	ALKBH7	83	45.355	Tursiops_truncatus
ENSCING00000003788	-	72	44.134	ENSUAMG00000026459	ALKBH7	92	45.395	Ursus_americanus
ENSCING00000003788	-	57	47.183	ENSUMAG00000011121	ALKBH7	89	47.183	Ursus_maritimus
ENSCING00000003788	-	72	44.693	ENSVVUG00000026894	ALKBH7	81	44.693	Vulpes_vulpes
ENSCING00000003788	-	70	38.506	ENSXETG00000005578	alkbh7	84	38.506	Xenopus_tropicalis