EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000003864 (Gene tree)
Gene ID: 100181804
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 8977 bases
Position: chr12:3206071-3215047
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000007967	DND1_DSRM	PF14709.7	2.7e-19	1	1
ENSCINP00000007976	DND1_DSRM	PF14709.7	2.8e-19	1	1
ENSCINP00000007967	RRM_1	PF00076.22	1.3e-38	1	3
ENSCINP00000007967	RRM_1	PF00076.22	1.3e-38	2	3
ENSCINP00000007967	RRM_1	PF00076.22	1.3e-38	3	3
ENSCINP00000007976	RRM_1	PF00076.22	1.4e-38	1	3
ENSCINP00000007976	RRM_1	PF00076.22	1.4e-38	2	3
ENSCINP00000007976	RRM_1	PF00076.22	1.4e-38	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000007967	-	1992	-	ENSCINP00000007967	619 (aa)	-	F6Y540
ENSCINT00000007976	-	2016	-	ENSCINP00000007976	627 (aa)	-	F6Y4T9

Gene Model

Click here to download ENSCING00000003864's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000003864's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000003864	-	88	49.281	ENSCING00000004101	-	95	49.460	Ciona_intestinalis
ENSCING00000003864	-	88	85.072	ENSCSAVG00000009923	-	99	84.892	Ciona_savignyi
ENSCING00000003864	-	84	48.881	ENSCSAVG00000000326	-	92	48.881	Ciona_savignyi