EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000003872 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: target of EGR1 protein 1-like
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 1379 bases
Position: chr5:877149-878527
Accession: 100186753
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000007983	CAF1	PF04857.20	2e-69	1	2
ENSCINP00000007983	CAF1	PF04857.20	2e-69	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000007983	-	1350	XM_002129839	ENSCINP00000007983	450 (aa)	XP_002129875	F6XGT9

Gene Model

Click here to download ENSCING00000003872's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000003872's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000003872	-	97	35.471	ENSG00000132773	TOE1	73	42.951	Homo_sapiens
ENSCING00000003872	-	99	35.057	ENSAPOG00000010450	toe1	73	45.455	Acanthochromis_polyacanthus
ENSCING00000003872	-	97	34.068	ENSAMEG00000013576	TOE1	94	34.113	Ailuropoda_melanoleuca
ENSCING00000003872	-	98	36.128	ENSACIG00000004175	toe1	77	43.046	Amphilophus_citrinellus
ENSCING00000003872	-	96	46.154	ENSAOCG00000022922	toe1	72	46.154	Amphiprion_ocellaris
ENSCING00000003872	-	96	46.128	ENSAPEG00000005572	toe1	72	46.128	Amphiprion_percula
ENSCING00000003872	-	87	44.108	ENSATEG00000008973	toe1	74	44.108	Anabas_testudineus
ENSCING00000003872	-	66	41.558	ENSACAG00000015161	TOE1	54	41.558	Anolis_carolinensis
ENSCING00000003872	-	100	33.871	ENSANAG00000023815	-	88	48.214	Aotus_nancymaae
ENSCING00000003872	-	100	30.709	ENSANAG00000032328	-	86	38.767	Aotus_nancymaae
ENSCING00000003872	-	86	44.068	ENSACLG00000021437	toe1	71	44.068	Astatotilapia_calliptera
ENSCING00000003872	-	66	43.434	ENSAMXG00000031029	toe1	59	43.434	Astyanax_mexicanus
ENSCING00000003872	-	97	34.113	ENSBTAG00000011243	TOE1	73	43.279	Bos_taurus
ENSCING00000003872	-	100	33.852	ENSCJAG00000004716	TOE1	72	42.623	Callithrix_jacchus
ENSCING00000003872	-	97	34.068	ENSCAFG00000004603	TOE1	95	34.113	Canis_familiaris
ENSCING00000003872	-	97	34.068	ENSCAFG00020016716	TOE1	95	34.113	Canis_lupus_dingo
ENSCING00000003872	-	97	34.870	ENSCHIG00000026678	TOE1	94	34.553	Capra_hircus
ENSCING00000003872	-	97	35.366	ENSTSYG00000011320	TOE1	87	50.000	Carlito_syrichta
ENSCING00000003872	-	61	35.417	ENSCAPG00000003952	TOE1	56	46.305	Cavia_aperea
ENSCING00000003872	-	100	34.638	ENSCPOG00000036595	TOE1	79	42.623	Cavia_porcellus
ENSCING00000003872	-	93	42.623	ENSCCAG00000030245	TOE1	88	48.661	Cebus_capucinus
ENSCING00000003872	-	97	34.739	ENSCATG00000038458	TOE1	88	49.099	Cercocebus_atys
ENSCING00000003872	-	99	34.510	ENSCLAG00000003906	TOE1	78	42.715	Chinchilla_lanigera
ENSCING00000003872	-	97	35.141	ENSCSAG00000001213	TOE1	73	42.951	Chlorocebus_sabaeus
ENSCING00000003872	-	99	34.247	ENSCHOG00000004270	TOE1	94	33.855	Choloepus_hoffmanni
ENSCING00000003872	-	66	41.946	ENSCPBG00000005398	TOE1	68	41.946	Chrysemys_picta_bellii
ENSCING00000003872	-	98	61.486	ENSCSAVG00000004594	-	98	61.712	Ciona_savignyi
ENSCING00000003872	-	97	35.271	ENSCANG00000037540	TOE1	73	42.951	Colobus_angolensis_palliatus
ENSCING00000003872	-	100	35.271	ENSCGRG00001022323	Toe1	95	35.271	Cricetulus_griseus_chok1gshd
ENSCING00000003872	-	100	35.271	ENSCGRG00000004377	Toe1	95	35.271	Cricetulus_griseus_crigri
ENSCING00000003872	-	86	43.537	ENSCSEG00000021445	toe1	70	43.537	Cynoglossus_semilaevis
ENSCING00000003872	-	86	45.085	ENSCVAG00000006577	toe1	74	45.085	Cyprinodon_variegatus
ENSCING00000003872	-	99	36.566	ENSDARG00000077544	toe1	97	36.970	Danio_rerio
ENSCING00000003872	-	100	34.825	ENSDNOG00000015596	TOE1	92	33.852	Dasypus_novemcinctus
ENSCING00000003872	-	97	36.105	ENSDORG00000007153	Toe1	95	36.550	Dipodomys_ordii
ENSCING00000003872	-	100	34.510	ENSETEG00000013367	TOE1	75	42.857	Echinops_telfairi
ENSCING00000003872	-	62	36.986	ENSEBUG00000000655	toe1	59	38.406	Eptatretus_burgeri
ENSCING00000003872	-	92	34.573	ENSEASG00005004198	TOE1	88	34.716	Equus_asinus_asinus
ENSCING00000003872	-	97	33.936	ENSECAG00000023204	TOE1	94	34.747	Equus_caballus
ENSCING00000003872	-	100	36.328	ENSEEUG00000015402	TOE1	94	36.382	Erinaceus_europaeus
ENSCING00000003872	-	96	43.243	ENSELUG00000012307	toe1	75	43.243	Esox_lucius
ENSCING00000003872	-	97	34.874	ENSFCAG00000038191	TOE1	95	34.898	Felis_catus
ENSCING00000003872	-	80	44.177	ENSFALG00000005017	TOE1	69	44.177	Ficedula_albicollis
ENSCING00000003872	-	97	35.861	ENSFDAG00000019031	TOE1	94	35.857	Fukomys_damarensis
ENSCING00000003872	-	97	45.085	ENSFHEG00000021893	toe1	74	45.085	Fundulus_heteroclitus
ENSCING00000003872	-	98	35.052	ENSGMOG00000004656	toe1	98	34.756	Gadus_morhua
ENSCING00000003872	-	65	40.461	ENSGALG00000010228	TOE1	69	40.461	Gallus_gallus
ENSCING00000003872	-	91	45.424	ENSGAFG00000013948	toe1	78	45.424	Gambusia_affinis
ENSCING00000003872	-	97	35.699	ENSGACG00000014339	toe1	78	49.367	Gasterosteus_aculeatus
ENSCING00000003872	-	66	42.617	ENSGAGG00000023228	TOE1	66	42.617	Gopherus_agassizii
ENSCING00000003872	-	97	35.471	ENSGGOG00000003290	TOE1	88	49.107	Gorilla_gorilla
ENSCING00000003872	-	86	43.729	ENSHBUG00000012101	toe1	71	43.729	Haplochromis_burtoni
ENSCING00000003872	-	97	35.556	ENSHGLG00000003603	TOE1	72	43.434	Heterocephalus_glaber_female
ENSCING00000003872	-	97	35.556	ENSHGLG00100015361	TOE1	72	43.434	Heterocephalus_glaber_male
ENSCING00000003872	-	97	35.903	ENSHCOG00000016394	toe1	97	33.058	Hippocampus_comes
ENSCING00000003872	-	64	44.674	ENSIPUG00000002717	toe1	96	36.730	Ictalurus_punctatus
ENSCING00000003872	-	100	35.039	ENSSTOG00000010669	TOE1	95	34.585	Ictidomys_tridecemlineatus
ENSCING00000003872	-	50	48.214	ENSJJAG00000021743	Toe1	91	54.054	Jaculus_jaculus
ENSCING00000003872	-	87	44.407	ENSKMAG00000020891	toe1	72	44.407	Kryptolebias_marmoratus
ENSCING00000003872	-	89	44.595	ENSLBEG00000010456	toe1	77	44.595	Labrus_bergylta
ENSCING00000003872	-	87	42.444	ENSLOCG00000002852	toe1	73	42.444	Lepisosteus_oculatus
ENSCING00000003872	-	95	34.698	ENSLAFG00000017370	TOE1	93	34.728	Loxodonta_africana
ENSCING00000003872	-	97	34.739	ENSMFAG00000042312	TOE1	88	49.099	Macaca_fascicularis
ENSCING00000003872	-	97	34.739	ENSMMUG00000020081	TOE1	76	43.554	Macaca_mulatta
ENSCING00000003872	-	97	34.739	ENSMNEG00000032131	TOE1	73	42.951	Macaca_nemestrina
ENSCING00000003872	-	97	34.739	ENSMLEG00000028729	TOE1	73	42.951	Mandrillus_leucophaeus
ENSCING00000003872	-	97	45.424	ENSMAMG00000015291	toe1	73	45.424	Mastacembelus_armatus
ENSCING00000003872	-	86	44.068	ENSMZEG00005014305	toe1	71	44.068	Maylandia_zebra
ENSCING00000003872	-	87	32.751	ENSMGAG00000010387	TOE1	98	32.798	Meleagris_gallopavo
ENSCING00000003872	-	99	35.167	ENSMAUG00000022118	Toe1	94	35.174	Mesocricetus_auratus
ENSCING00000003872	-	98	34.190	ENSMICG00000047305	-	94	33.878	Microcebus_murinus
ENSCING00000003872	-	72	33.939	ENSMICG00000032375	-	80	38.073	Microcebus_murinus
ENSCING00000003872	-	97	34.238	ENSMOCG00000012917	Toe1	95	34.077	Microtus_ochrogaster
ENSCING00000003872	-	99	35.983	ENSMMOG00000020894	toe1	99	36.611	Mola_mola
ENSCING00000003872	-	87	41.722	ENSMODG00000002430	TOE1	82	41.806	Monodelphis_domestica
ENSCING00000003872	-	86	44.746	ENSMALG00000010017	toe1	77	44.746	Monopterus_albus
ENSCING00000003872	-	97	34.800	MGP_CAROLIEiJ_G0026342	Toe1	98	51.630	Mus_caroli
ENSCING00000003872	-	97	35.600	ENSMUSG00000028688	Toe1	98	52.174	Mus_musculus
ENSCING00000003872	-	97	35.141	MGP_PahariEiJ_G0028674	Toe1	98	52.174	Mus_pahari
ENSCING00000003872	-	97	35.600	MGP_SPRETEiJ_G0027314	Toe1	98	52.174	Mus_spretus
ENSCING00000003872	-	99	33.659	ENSMPUG00000013123	TOE1	94	33.659	Mustela_putorius_furo
ENSCING00000003872	-	100	35.088	ENSMLUG00000005649	TOE1	95	35.510	Myotis_lucifugus
ENSCING00000003872	-	98	36.289	ENSNBRG00000019107	toe1	98	35.802	Neolamprologus_brichardi
ENSCING00000003872	-	97	36.072	ENSNLEG00000014383	TOE1	88	49.554	Nomascus_leucogenys
ENSCING00000003872	-	73	52.903	ENSMEUG00000000629	-	57	52.903	Notamacropus_eugenii
ENSCING00000003872	-	97	35.579	ENSOPRG00000004057	TOE1	95	35.438	Ochotona_princeps
ENSCING00000003872	-	98	35.317	ENSODEG00000008239	TOE1	93	35.516	Octodon_degus
ENSCING00000003872	-	86	44.407	ENSONIG00000009053	toe1	71	44.407	Oreochromis_niloticus
ENSCING00000003872	-	69	43.511	ENSOANG00000011797	-	67	43.511	Ornithorhynchus_anatinus
ENSCING00000003872	-	100	34.951	ENSOCUG00000017503	TOE1	95	34.698	Oryctolagus_cuniculus
ENSCING00000003872	-	88	46.102	ENSORLG00000012609	toe1	74	46.102	Oryzias_latipes
ENSCING00000003872	-	99	46.102	ENSORLG00020006441	toe1	73	46.102	Oryzias_latipes_hni
ENSCING00000003872	-	86	46.102	ENSORLG00015001476	toe1	73	46.102	Oryzias_latipes_hsok
ENSCING00000003872	-	87	46.465	ENSOMEG00000014153	toe1	74	46.465	Oryzias_melastigma
ENSCING00000003872	-	97	33.723	ENSOARG00000001561	TOE1	73	43.279	Ovis_aries
ENSCING00000003872	-	97	35.271	ENSPPAG00000043315	TOE1	88	49.107	Pan_paniscus
ENSCING00000003872	-	97	34.874	ENSPPRG00000011880	TOE1	95	34.898	Panthera_pardus
ENSCING00000003872	-	97	34.874	ENSPTIG00000008086	TOE1	95	34.898	Panthera_tigris_altaica
ENSCING00000003872	-	97	35.471	ENSPTRG00000000672	TOE1	88	49.107	Pan_troglodytes
ENSCING00000003872	-	97	34.739	ENSPANG00000012549	TOE1	71	42.951	Papio_anubis
ENSCING00000003872	-	99	38.445	ENSPKIG00000010811	toe1	96	38.578	Paramormyrops_kingsleyae
ENSCING00000003872	-	50	47.982	ENSPSIG00000010299	TOE1	84	45.798	Pelodiscus_sinensis
ENSCING00000003872	-	86	44.554	ENSPMGG00000020389	toe1	77	44.554	Periophthalmus_magnuspinnatus
ENSCING00000003872	-	100	34.698	ENSPEMG00000021892	Toe1	95	34.698	Peromyscus_maniculatus_bairdii
ENSCING00000003872	-	97	31.299	ENSPMAG00000004794	toe1	72	38.689	Petromyzon_marinus
ENSCING00000003872	-	86	43.289	ENSPCIG00000027569	TOE1	75	43.289	Phascolarctos_cinereus
ENSCING00000003872	-	93	44.746	ENSPFOG00000019517	toe1	79	44.746	Poecilia_formosa
ENSCING00000003872	-	93	44.407	ENSPLAG00000018228	toe1	79	44.407	Poecilia_latipinna
ENSCING00000003872	-	98	34.951	ENSPMEG00000019956	toe1	77	44.746	Poecilia_mexicana
ENSCING00000003872	-	97	35.271	ENSPPYG00000001414	TOE1	73	42.951	Pongo_abelii
ENSCING00000003872	-	98	36.000	ENSPCAG00000013351	TOE1	93	35.865	Procavia_capensis
ENSCING00000003872	-	98	34.455	ENSPCOG00000000982	TOE1	87	49.099	Propithecus_coquereli
ENSCING00000003872	-	90	34.549	ENSPVAG00000014998	TOE1	87	33.619	Pteropus_vampyrus
ENSCING00000003872	-	86	43.729	ENSPNYG00000019914	toe1	71	43.729	Pundamilia_nyererei
ENSCING00000003872	-	99	34.556	ENSPNAG00000021933	toe1	73	45.118	Pygocentrus_nattereri
ENSCING00000003872	-	97	36.461	ENSRNOG00000017561	Toe1	94	36.439	Rattus_norvegicus
ENSCING00000003872	-	97	35.070	ENSRBIG00000031463	TOE1	88	49.099	Rhinopithecus_bieti
ENSCING00000003872	-	97	34.669	ENSRROG00000026371	TOE1	88	49.099	Rhinopithecus_roxellana
ENSCING00000003872	-	100	33.658	ENSSBOG00000026044	-	88	48.661	Saimiri_boliviensis_boliviensis
ENSCING00000003872	-	84	42.561	ENSSHAG00000010201	TOE1	77	42.000	Sarcophilus_harrisii
ENSCING00000003872	-	99	34.592	ENSSFOG00015021182	toe1	97	34.990	Scleropages_formosus
ENSCING00000003872	-	87	45.424	ENSSDUG00000013278	toe1	72	45.424	Seriola_dumerili
ENSCING00000003872	-	87	44.407	ENSSLDG00000021979	toe1	72	44.407	Seriola_lalandi_dorsalis
ENSCING00000003872	-	86	42.475	ENSSPUG00000003464	TOE1	69	41.639	Sphenodon_punctatus
ENSCING00000003872	-	86	45.085	ENSSPAG00000009490	toe1	71	45.085	Stegastes_partitus
ENSCING00000003872	-	99	36.232	ENSSSCG00000003918	TOE1	94	35.611	Sus_scrofa
ENSCING00000003872	-	97	33.535	ENSTGUG00000007927	TOE1	77	40.067	Taeniopygia_guttata
ENSCING00000003872	-	98	35.758	ENSTRUG00000025603	toe1	81	44.068	Takifugu_rubripes
ENSCING00000003872	-	96	37.778	ENSTNIG00000017614	toe1	99	37.691	Tetraodon_nigroviridis
ENSCING00000003872	-	72	48.246	ENSTBEG00000017625	TOE1	62	47.521	Tupaia_belangeri
ENSCING00000003872	-	97	35.070	ENSTTRG00000008815	TOE1	94	35.088	Tursiops_truncatus
ENSCING00000003872	-	97	34.068	ENSUAMG00000017724	TOE1	95	34.308	Ursus_americanus
ENSCING00000003872	-	96	34.141	ENSUMAG00000024253	TOE1	100	34.141	Ursus_maritimus
ENSCING00000003872	-	97	34.669	ENSVPAG00000011731	TOE1	95	35.102	Vicugna_pacos
ENSCING00000003872	-	100	34.308	ENSVVUG00000007469	TOE1	89	34.308	Vulpes_vulpes
ENSCING00000003872	-	69	42.812	ENSXETG00000003534	toe1	58	43.243	Xenopus_tropicalis
ENSCING00000003872	-	98	35.603	ENSXCOG00000007796	toe1	76	45.085	Xiphophorus_couchianus
ENSCING00000003872	-	98	35.340	ENSXMAG00000011102	toe1	78	45.085	Xiphophorus_maculatus