EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000003952 (Gene tree)
Gene ID: 100177338
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 1418 bases
Position: chr8:6378109-6379526
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000008144	MTS	PF05175.14	3.9e-05	1	1
ENSCINP00000008144	AdoMet_MTase	PF07757.13	5.2e-05	1	1
ENSCINP00000008144	Methyltransf_31	PF13847.6	5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000008144	-	701	-	ENSCINP00000008144	223 (aa)	-	F6ZLL7

Gene Model

Click here to download ENSCING00000003952's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000003952's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000003952	-	79	39.205	ENSG00000203791	EEF1AKMT2	94	58.621	Homo_sapiens
ENSCING00000003952	-	96	39.070	ENSAPOG00000001439	eef1akmt2	77	39.070	Acanthochromis_polyacanthus
ENSCING00000003952	-	77	42.197	ENSAMEG00000004197	-	99	41.618	Ailuropoda_melanoleuca
ENSCING00000003952	-	96	40.000	ENSACIG00000005482	eef1akmt2	90	39.535	Amphilophus_citrinellus
ENSCING00000003952	-	96	39.070	ENSAOCG00000004496	eef1akmt2	77	39.070	Amphiprion_ocellaris
ENSCING00000003952	-	96	38.605	ENSAPEG00000007081	eef1akmt2	77	38.605	Amphiprion_percula
ENSCING00000003952	-	99	40.529	ENSATEG00000007817	eef1akmt2	95	40.529	Anabas_testudineus
ENSCING00000003952	-	90	42.079	ENSAPLG00000015137	-	99	42.079	Anas_platyrhynchos
ENSCING00000003952	-	96	45.833	ENSACAG00000014407	-	98	45.833	Anolis_carolinensis
ENSCING00000003952	-	91	40.887	ENSANAG00000020212	EEF1AKMT2	85	40.686	Aotus_nancymaae
ENSCING00000003952	-	96	41.395	ENSACLG00000017498	eef1akmt2	90	41.395	Astatotilapia_calliptera
ENSCING00000003952	-	97	39.171	ENSAMXG00000011707	eef1akmt2	96	39.171	Astyanax_mexicanus
ENSCING00000003952	-	93	40.865	ENSBTAG00000050151	-	87	40.865	Bos_taurus
ENSCING00000003952	-	99	38.034	WBGene00017919	F29B9.1	98	38.034	Caenorhabditis_elegans
ENSCING00000003952	-	79	39.205	ENSCJAG00000012593	EEF1AKMT2	66	39.205	Callithrix_jacchus
ENSCING00000003952	-	77	41.279	ENSCAFG00000012755	-	99	41.279	Canis_familiaris
ENSCING00000003952	-	91	41.584	ENSCAFG00020015392	-	83	41.584	Canis_lupus_dingo
ENSCING00000003952	-	93	40.865	ENSCHIG00000004811	-	87	40.865	Capra_hircus
ENSCING00000003952	-	65	33.793	ENSCHIG00000017265	-	84	35.172	Capra_hircus
ENSCING00000003952	-	93	41.346	ENSTSYG00000026659	EEF1AKMT2	85	41.346	Carlito_syrichta
ENSCING00000003952	-	91	40.099	ENSCAPG00000010392	-	97	40.099	Cavia_aperea
ENSCING00000003952	-	97	40.278	ENSCPOG00000005341	-	86	40.278	Cavia_porcellus
ENSCING00000003952	-	84	37.895	ENSCCAG00000003096	EEF1AKMT2	70	37.895	Cebus_capucinus
ENSCING00000003952	-	93	41.346	ENSCATG00000030673	-	87	41.346	Cercocebus_atys
ENSCING00000003952	-	94	40.191	ENSCLAG00000003615	-	86	40.191	Chinchilla_lanigera
ENSCING00000003952	-	93	41.346	ENSCSAG00000004519	-	79	41.346	Chlorocebus_sabaeus
ENSCING00000003952	-	96	43.458	ENSCPBG00000028069	-	93	43.458	Chrysemys_picta_bellii
ENSCING00000003952	-	96	63.793	ENSCSAVG00000004091	-	99	63.519	Ciona_savignyi
ENSCING00000003952	-	93	41.346	ENSCANG00000035139	EEF1AKMT2	87	41.346	Colobus_angolensis_palliatus
ENSCING00000003952	-	93	41.827	ENSCGRG00001018428	Eef1akmt2	84	41.827	Cricetulus_griseus_chok1gshd
ENSCING00000003952	-	93	41.827	ENSCGRG00000004819	Eef1akmt2	84	41.827	Cricetulus_griseus_crigri
ENSCING00000003952	-	96	39.720	ENSCSEG00000015275	eef1akmt2	87	39.720	Cynoglossus_semilaevis
ENSCING00000003952	-	96	40.000	ENSCVAG00000019478	eef1akmt2	91	40.000	Cyprinodon_variegatus
ENSCING00000003952	-	99	38.739	ENSDARG00000102144	eef1akmt2	91	38.739	Danio_rerio
ENSCING00000003952	-	93	41.346	ENSDNOG00000049387	-	79	41.346	Dasypus_novemcinctus
ENSCING00000003952	-	85	38.095	ENSDORG00000016286	Eef1akmt2	80	38.095	Dipodomys_ordii
ENSCING00000003952	-	96	40.367	FBgn0031485	CG9643	99	40.367	Drosophila_melanogaster
ENSCING00000003952	-	93	41.346	ENSEASG00005013990	-	87	41.346	Equus_asinus_asinus
ENSCING00000003952	-	93	41.346	ENSECAG00000007838	FAM53B	87	41.346	Equus_caballus
ENSCING00000003952	-	95	40.566	ENSELUG00000000203	eef1akmt2	88	40.566	Esox_lucius
ENSCING00000003952	-	93	43.269	ENSFCAG00000018244	-	86	43.269	Felis_catus
ENSCING00000003952	-	91	41.089	ENSFALG00000004816	-	95	41.089	Ficedula_albicollis
ENSCING00000003952	-	98	40.826	ENSFDAG00000021123	EEF1AKMT2	92	40.826	Fukomys_damarensis
ENSCING00000003952	-	96	39.535	ENSFHEG00000021112	eef1akmt2	76	39.535	Fundulus_heteroclitus
ENSCING00000003952	-	90	43.415	ENSGMOG00000018298	eef1akmt2	99	43.415	Gadus_morhua
ENSCING00000003952	-	82	40.659	ENSGALG00000034013	-	98	42.442	Gallus_gallus
ENSCING00000003952	-	96	41.860	ENSGAFG00000011872	eef1akmt2	90	41.860	Gambusia_affinis
ENSCING00000003952	-	93	40.465	ENSGACG00000009677	eef1akmt2	92	38.798	Gasterosteus_aculeatus
ENSCING00000003952	-	96	43.721	ENSGAGG00000019118	-	93	43.925	Gopherus_agassizii
ENSCING00000003952	-	76	37.647	ENSGGOG00000024976	EEF1AKMT2	87	40.580	Gorilla_gorilla
ENSCING00000003952	-	96	41.395	ENSHBUG00000016969	eef1akmt2	90	41.395	Haplochromis_burtoni
ENSCING00000003952	-	99	39.189	ENSHGLG00000011000	EEF1AKMT2	86	40.670	Heterocephalus_glaber_female
ENSCING00000003952	-	99	39.189	ENSHGLG00100005124	EEF1AKMT2	86	40.670	Heterocephalus_glaber_male
ENSCING00000003952	-	97	39.631	ENSHCOG00000016501	eef1akmt2	87	39.631	Hippocampus_comes
ENSCING00000003952	-	96	39.437	ENSIPUG00000020556	mettl10	91	39.437	Ictalurus_punctatus
ENSCING00000003952	-	93	42.308	ENSJJAG00000010893	Eef1akmt2	85	42.308	Jaculus_jaculus
ENSCING00000003952	-	96	40.465	ENSKMAG00000020780	eef1akmt2	77	40.465	Kryptolebias_marmoratus
ENSCING00000003952	-	96	34.419	ENSLBEG00000022458	eef1akmt2	88	34.419	Labrus_bergylta
ENSCING00000003952	-	96	43.458	ENSLACG00000013816	eef1akmt2	85	43.458	Latimeria_chalumnae
ENSCING00000003952	-	99	38.739	ENSLOCG00000008027	eef1akmt2	96	38.739	Lepisosteus_oculatus
ENSCING00000003952	-	93	41.346	ENSLAFG00000007509	-	88	41.346	Loxodonta_africana
ENSCING00000003952	-	50	41.071	ENSMFAG00000002265	-	72	41.071	Macaca_fascicularis
ENSCING00000003952	-	93	41.346	ENSMNEG00000029600	-	87	41.346	Macaca_nemestrina
ENSCING00000003952	-	93	41.346	ENSMLEG00000036372	-	87	41.346	Mandrillus_leucophaeus
ENSCING00000003952	-	98	39.556	ENSMAMG00000017142	eef1akmt2	94	39.556	Mastacembelus_armatus
ENSCING00000003952	-	96	41.395	ENSMZEG00005027455	eef1akmt2	90	41.395	Maylandia_zebra
ENSCING00000003952	-	92	41.463	ENSMGAG00000011686	-	86	41.463	Meleagris_gallopavo
ENSCING00000003952	-	93	41.827	ENSMAUG00000004683	Eef1akmt2	84	41.827	Mesocricetus_auratus
ENSCING00000003952	-	93	41.346	ENSMICG00000029191	-	87	41.346	Microcebus_murinus
ENSCING00000003952	-	93	42.308	ENSMOCG00000015688	Eef1akmt2	84	42.308	Microtus_ochrogaster
ENSCING00000003952	-	97	37.500	ENSMMOG00000008195	eef1akmt2	90	37.500	Mola_mola
ENSCING00000003952	-	99	40.724	ENSMODG00000010207	-	100	40.724	Monodelphis_domestica
ENSCING00000003952	-	96	39.070	ENSMALG00000018358	eef1akmt2	90	39.070	Monopterus_albus
ENSCING00000003952	-	94	42.105	MGP_CAROLIEiJ_G0030581	Eef1akmt2	85	42.105	Mus_caroli
ENSCING00000003952	-	94	42.105	ENSMUSG00000030960	Eef1akmt2	85	42.105	Mus_musculus
ENSCING00000003952	-	94	42.105	MGP_SPRETEiJ_G0031695	Eef1akmt2	85	42.105	Mus_spretus
ENSCING00000003952	-	96	40.187	ENSMPUG00000002730	-	89	40.187	Mustela_putorius_furo
ENSCING00000003952	-	90	42.000	ENSMLUG00000026925	-	99	42.000	Myotis_lucifugus
ENSCING00000003952	-	93	41.346	ENSNGAG00000006986	Eef1akmt2	87	41.346	Nannospalax_galili
ENSCING00000003952	-	96	41.395	ENSNBRG00000016151	eef1akmt2	90	41.395	Neolamprologus_brichardi
ENSCING00000003952	-	85	37.566	ENSNLEG00000000539	EEF1AKMT2	63	38.587	Nomascus_leucogenys
ENSCING00000003952	-	84	39.362	ENSMEUG00000008844	-	97	39.362	Notamacropus_eugenii
ENSCING00000003952	-	82	35.870	ENSOPRG00000003353	-	88	35.326	Ochotona_princeps
ENSCING00000003952	-	94	42.105	ENSODEG00000017201	-	86	42.105	Octodon_degus
ENSCING00000003952	-	96	41.860	ENSONIG00000000522	eef1akmt2	87	41.860	Oreochromis_niloticus
ENSCING00000003952	-	93	41.346	ENSOCUG00000004774	-	65	41.346	Oryctolagus_cuniculus
ENSCING00000003952	-	96	39.535	ENSORLG00000005635	EEF1AKMT2	90	39.535	Oryzias_latipes
ENSCING00000003952	-	96	39.535	ENSORLG00020009481	eef1akmt2	90	39.535	Oryzias_latipes_hni
ENSCING00000003952	-	96	39.535	ENSORLG00015014487	eef1akmt2	90	39.535	Oryzias_latipes_hsok
ENSCING00000003952	-	96	40.930	ENSOMEG00000008648	eef1akmt2	90	40.930	Oryzias_melastigma
ENSCING00000003952	-	93	35.407	ENSOGAG00000027770	-	88	35.407	Otolemur_garnettii
ENSCING00000003952	-	80	35.556	ENSOGAG00000011015	-	84	35.028	Otolemur_garnettii
ENSCING00000003952	-	90	40.796	ENSOARG00000010457	-	100	40.000	Ovis_aries
ENSCING00000003952	-	79	39.205	ENSPPAG00000034943	EEF1AKMT2	62	38.462	Pan_paniscus
ENSCING00000003952	-	79	40.909	ENSPPRG00000017084	-	81	40.909	Panthera_pardus
ENSCING00000003952	-	79	40.909	ENSPTIG00000017308	-	85	40.909	Panthera_tigris_altaica
ENSCING00000003952	-	79	39.205	ENSPTRG00000032571	EEF1AKMT2	62	38.462	Pan_troglodytes
ENSCING00000003952	-	93	41.346	ENSPANG00000020335	-	87	41.346	Papio_anubis
ENSCING00000003952	-	96	40.654	ENSPKIG00000001059	eef1akmt2	88	40.654	Paramormyrops_kingsleyae
ENSCING00000003952	-	96	43.519	ENSPSIG00000009720	-	93	43.519	Pelodiscus_sinensis
ENSCING00000003952	-	96	40.654	ENSPMGG00000014806	eef1akmt2	89	40.654	Periophthalmus_magnuspinnatus
ENSCING00000003952	-	94	42.584	ENSPEMG00000012513	Eef1akmt2	86	42.584	Peromyscus_maniculatus_bairdii
ENSCING00000003952	-	94	40.187	ENSPMAG00000000651	eef1akmt2	91	38.914	Petromyzon_marinus
ENSCING00000003952	-	98	42.009	ENSPCIG00000023106	-	93	42.009	Phascolarctos_cinereus
ENSCING00000003952	-	96	42.326	ENSPFOG00000017870	eef1akmt2	90	42.326	Poecilia_formosa
ENSCING00000003952	-	96	41.860	ENSPLAG00000014862	eef1akmt2	90	41.860	Poecilia_latipinna
ENSCING00000003952	-	96	41.860	ENSPMEG00000011135	eef1akmt2	90	41.860	Poecilia_mexicana
ENSCING00000003952	-	96	41.860	ENSPREG00000011465	eef1akmt2	90	41.860	Poecilia_reticulata
ENSCING00000003952	-	82	38.462	ENSPPYG00000002742	EEF1AKMT2	62	38.462	Pongo_abelii
ENSCING00000003952	-	65	36.986	ENSPCAG00000006220	-	70	36.986	Procavia_capensis
ENSCING00000003952	-	74	37.805	ENSPCOG00000017778	EEF1AKMT2	91	34.043	Propithecus_coquereli
ENSCING00000003952	-	79	32.955	ENSPVAG00000003023	-	85	32.955	Pteropus_vampyrus
ENSCING00000003952	-	96	41.395	ENSPNYG00000003960	eef1akmt2	90	41.395	Pundamilia_nyererei
ENSCING00000003952	-	97	38.710	ENSPNAG00000022223	eef1akmt2	93	38.710	Pygocentrus_nattereri
ENSCING00000003952	-	93	41.346	ENSRBIG00000032554	EEF1AKMT2	90	40.580	Rhinopithecus_bieti
ENSCING00000003952	-	93	41.346	ENSRROG00000044657	-	87	41.346	Rhinopithecus_roxellana
ENSCING00000003952	-	96	30.222	YIL064W	-	87	30.222	Saccharomyces_cerevisiae
ENSCING00000003952	-	93	40.865	ENSSBOG00000023032	-	87	40.865	Saimiri_boliviensis_boliviensis
ENSCING00000003952	-	69	41.935	ENSSHAG00000000955	-	75	42.143	Sarcophilus_harrisii
ENSCING00000003952	-	97	37.327	ENSSFOG00015009906	mettl10	96	37.327	Scleropages_formosus
ENSCING00000003952	-	96	40.465	ENSSMAG00000019714	eef1akmt2	90	40.465	Scophthalmus_maximus
ENSCING00000003952	-	96	39.070	ENSSDUG00000016179	eef1akmt2	90	39.070	Seriola_dumerili
ENSCING00000003952	-	96	39.070	ENSSLDG00000016698	eef1akmt2	90	39.070	Seriola_lalandi_dorsalis
ENSCING00000003952	-	66	39.597	ENSSARG00000003739	-	100	38.926	Sorex_araneus
ENSCING00000003952	-	97	43.779	ENSSPUG00000012992	-	91	43.779	Sphenodon_punctatus
ENSCING00000003952	-	96	39.535	ENSSPAG00000011418	eef1akmt2	77	39.535	Stegastes_partitus
ENSCING00000003952	-	93	39.130	ENSSSCG00000023560	-	89	39.035	Sus_scrofa
ENSCING00000003952	-	94	43.062	ENSTGUG00000011451	-	99	43.062	Taeniopygia_guttata
ENSCING00000003952	-	93	42.788	ENSTRUG00000001336	eef1akmt2	90	41.667	Takifugu_rubripes
ENSCING00000003952	-	94	41.148	ENSTNIG00000013345	eef1akmt2	85	41.148	Tetraodon_nigroviridis
ENSCING00000003952	-	79	38.983	ENSTTRG00000013700	-	85	38.983	Tursiops_truncatus
ENSCING00000003952	-	97	41.475	ENSUMAG00000005375	-	90	41.475	Ursus_maritimus
ENSCING00000003952	-	76	38.596	ENSVPAG00000010652	-	100	38.596	Vicugna_pacos
ENSCING00000003952	-	93	42.308	ENSVVUG00000005997	-	85	42.308	Vulpes_vulpes
ENSCING00000003952	-	97	44.907	ENSXETG00000030721	-	98	44.907	Xenopus_tropicalis
ENSCING00000003952	-	96	40.930	ENSXCOG00000009889	eef1akmt2	90	40.930	Xiphophorus_couchianus
ENSCING00000003952	-	96	41.860	ENSXMAG00000012537	eef1akmt2	90	41.860	Xiphophorus_maculatus