EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000004008 (Gene tree)
Gene ID: 100179750
Gene Symbol: -
Alias: -
Full Name: probable asparagine--tRNA ligase%2C mitochondrial
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 4128 bases
Position: chr2:1601516-1605643
Accession: 100179750
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000008254	tRNA_anti-codon	PF01336.25	5.9e-09	1	1
ENSCINP00000008254	tRNA-synt_2	PF00152.20	7.2e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000008254	-	1744	XM_002119948	ENSCINP00000008254	471 (aa)	XP_002119984	F6VXM8

Gene Model

Click here to download ENSCING00000004008's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000004008's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000004008	-	96	42.013	ENSG00000137513	NARS2	99	54.444	Homo_sapiens
ENSCING00000004008	-	96	41.667	ENSAPOG00000022947	nars2	93	41.667	Acanthochromis_polyacanthus
ENSCING00000004008	-	96	42.950	ENSAMEG00000002223	NARS2	95	42.950	Ailuropoda_melanoleuca
ENSCING00000004008	-	98	38.723	ENSACIG00000023918	nars2	96	38.723	Amphilophus_citrinellus
ENSCING00000004008	-	96	41.667	ENSAOCG00000012259	nars2	93	41.667	Amphiprion_ocellaris
ENSCING00000004008	-	96	41.447	ENSAPEG00000012242	nars2	93	41.447	Amphiprion_percula
ENSCING00000004008	-	52	44.800	ENSATEG00000010262	nars2	99	44.800	Anabas_testudineus
ENSCING00000004008	-	96	44.298	ENSAPLG00000005256	NARS2	95	44.298	Anas_platyrhynchos
ENSCING00000004008	-	93	42.922	ENSACAG00000012231	NARS2	90	42.922	Anolis_carolinensis
ENSCING00000004008	-	93	43.836	ENSANAG00000022061	NARS2	98	46.185	Aotus_nancymaae
ENSCING00000004008	-	96	42.670	ENSACLG00000023017	nars2	93	42.670	Astatotilapia_calliptera
ENSCING00000004008	-	51	30.216	ENSAMXG00000017796	dars	58	30.216	Astyanax_mexicanus
ENSCING00000004008	-	99	41.737	ENSAMXG00000010086	nars2	96	41.737	Astyanax_mexicanus
ENSCING00000004008	-	95	43.875	ENSBTAG00000039943	NARS2	92	43.875	Bos_taurus
ENSCING00000004008	-	92	35.550	WBGene00013447	nars-2	96	35.550	Caenorhabditis_elegans
ENSCING00000004008	-	96	42.888	ENSCJAG00000014753	NARS2	95	42.670	Callithrix_jacchus
ENSCING00000004008	-	96	43.326	ENSCAFG00020000396	NARS2	95	43.326	Canis_lupus_dingo
ENSCING00000004008	-	95	43.430	ENSCHIG00000018475	NARS2	92	43.430	Capra_hircus
ENSCING00000004008	-	96	41.794	ENSTSYG00000011114	NARS2	95	41.794	Carlito_syrichta
ENSCING00000004008	-	66	57.353	ENSCAPG00000003395	NARS2	89	57.353	Cavia_aperea
ENSCING00000004008	-	96	42.888	ENSCPOG00000002639	NARS2	95	42.888	Cavia_porcellus
ENSCING00000004008	-	52	46.586	ENSCATG00000031854	NARS2	99	46.586	Cercocebus_atys
ENSCING00000004008	-	96	43.326	ENSCLAG00000012233	NARS2	95	43.326	Chinchilla_lanigera
ENSCING00000004008	-	84	38.693	ENSCSAG00000003793	NARS2	93	38.693	Chlorocebus_sabaeus
ENSCING00000004008	-	99	43.008	ENSCPBG00000015777	NARS2	98	43.008	Chrysemys_picta_bellii
ENSCING00000004008	-	100	68.076	ENSCSAVG00000011225	-	100	68.076	Ciona_savignyi
ENSCING00000004008	-	99	40.466	ENSCANG00000030787	NARS2	99	46.185	Colobus_angolensis_palliatus
ENSCING00000004008	-	99	40.881	ENSCGRG00001014939	Nars2	98	40.881	Cricetulus_griseus_chok1gshd
ENSCING00000004008	-	99	40.671	ENSCGRG00000011598	Nars2	98	40.671	Cricetulus_griseus_crigri
ENSCING00000004008	-	96	41.886	ENSCSEG00000005464	nars2	93	41.886	Cynoglossus_semilaevis
ENSCING00000004008	-	96	41.886	ENSCVAG00000023419	nars2	92	41.447	Cyprinodon_variegatus
ENSCING00000004008	-	99	42.463	ENSDARG00000098441	nars2	95	42.463	Danio_rerio
ENSCING00000004008	-	73	46.667	ENSDNOG00000014892	NARS2	100	46.667	Dasypus_novemcinctus
ENSCING00000004008	-	99	42.038	ENSDORG00000014688	Nars2	97	42.038	Dipodomys_ordii
ENSCING00000004008	-	97	35.331	FBgn0034177	AsnRS-m	99	35.331	Drosophila_melanogaster
ENSCING00000004008	-	92	42.890	ENSETEG00000013473	NARS2	100	42.890	Echinops_telfairi
ENSCING00000004008	-	97	41.342	ENSEBUG00000004813	nars2	90	41.342	Eptatretus_burgeri
ENSCING00000004008	-	99	41.860	ENSEASG00005013867	NARS2	98	41.860	Equus_asinus_asinus
ENSCING00000004008	-	96	42.670	ENSECAG00000017653	NARS2	95	42.670	Equus_caballus
ENSCING00000004008	-	88	40.528	ENSEEUG00000001851	NARS2	86	40.528	Erinaceus_europaeus
ENSCING00000004008	-	97	40.700	ENSELUG00000023629	nars2	94	40.700	Esox_lucius
ENSCING00000004008	-	96	43.167	ENSFCAG00000007984	NARS2	95	43.167	Felis_catus
ENSCING00000004008	-	96	41.794	ENSFDAG00000013470	NARS2	95	41.794	Fukomys_damarensis
ENSCING00000004008	-	96	42.105	ENSFHEG00000014152	nars2	93	42.105	Fundulus_heteroclitus
ENSCING00000004008	-	92	41.972	ENSGMOG00000002677	nars2	100	41.972	Gadus_morhua
ENSCING00000004008	-	96	43.202	ENSGALG00000017262	NARS2	98	44.622	Gallus_gallus
ENSCING00000004008	-	96	41.667	ENSGAFG00000020300	nars2	93	41.667	Gambusia_affinis
ENSCING00000004008	-	96	42.763	ENSGACG00000012085	nars2	95	42.984	Gasterosteus_aculeatus
ENSCING00000004008	-	89	40.233	ENSGAGG00000016597	NARS2	92	40.233	Gopherus_agassizii
ENSCING00000004008	-	96	42.013	ENSGGOG00000004049	NARS2	99	46.586	Gorilla_gorilla
ENSCING00000004008	-	96	42.670	ENSHBUG00000001449	nars2	93	42.670	Haplochromis_burtoni
ENSCING00000004008	-	67	34.940	ENSHGLG00000000814	-	68	34.940	Heterocephalus_glaber_female
ENSCING00000004008	-	96	42.232	ENSHGLG00000003746	NARS2	95	42.232	Heterocephalus_glaber_female
ENSCING00000004008	-	52	46.586	ENSHGLG00100011479	-	99	46.586	Heterocephalus_glaber_male
ENSCING00000004008	-	67	34.940	ENSHGLG00100002873	-	68	34.940	Heterocephalus_glaber_male
ENSCING00000004008	-	97	42.457	ENSHCOG00000011107	nars2	99	44.747	Hippocampus_comes
ENSCING00000004008	-	99	40.795	ENSIPUG00000020892	nars2	97	40.795	Ictalurus_punctatus
ENSCING00000004008	-	99	41.860	ENSSTOG00000019758	NARS2	98	41.860	Ictidomys_tridecemlineatus
ENSCING00000004008	-	98	41.202	ENSJJAG00000015019	Nars2	97	41.202	Jaculus_jaculus
ENSCING00000004008	-	96	42.232	ENSKMAG00000004015	nars2	94	43.182	Kryptolebias_marmoratus
ENSCING00000004008	-	96	43.202	ENSLBEG00000000890	nars2	93	43.202	Labrus_bergylta
ENSCING00000004008	-	69	32.424	ENSLACG00000011611	NARS2	91	32.424	Latimeria_chalumnae
ENSCING00000004008	-	96	41.886	ENSLOCG00000005772	nars2	92	41.886	Lepisosteus_oculatus
ENSCING00000004008	-	96	41.357	ENSLAFG00000008484	NARS2	95	41.357	Loxodonta_africana
ENSCING00000004008	-	96	41.575	ENSMFAG00000033477	NARS2	95	41.575	Macaca_fascicularis
ENSCING00000004008	-	96	41.575	ENSMMUG00000004649	NARS2	95	41.575	Macaca_mulatta
ENSCING00000004008	-	96	41.575	ENSMNEG00000036144	NARS2	95	41.575	Macaca_nemestrina
ENSCING00000004008	-	96	41.575	ENSMLEG00000029559	NARS2	99	46.185	Mandrillus_leucophaeus
ENSCING00000004008	-	96	42.013	ENSMAMG00000012198	nars2	91	42.013	Mastacembelus_armatus
ENSCING00000004008	-	97	40.299	ENSMZEG00005024050	nars2	94	40.257	Maylandia_zebra
ENSCING00000004008	-	96	42.358	ENSMGAG00000015247	NARS2	94	42.358	Meleagris_gallopavo
ENSCING00000004008	-	85	39.303	ENSMAUG00000002138	Nars2	97	39.599	Mesocricetus_auratus
ENSCING00000004008	-	96	41.794	ENSMICG00000015093	NARS2	99	45.783	Microcebus_murinus
ENSCING00000004008	-	99	41.015	ENSMOCG00000004938	Nars2	98	41.015	Microtus_ochrogaster
ENSCING00000004008	-	99	41.525	ENSMMOG00000000317	nars2	95	41.525	Mola_mola
ENSCING00000004008	-	96	41.794	ENSMODG00000004713	NARS2	94	41.794	Monodelphis_domestica
ENSCING00000004008	-	96	41.138	ENSMALG00000010294	nars2	93	41.138	Monopterus_albus
ENSCING00000004008	-	99	40.042	MGP_CAROLIEiJ_G0029996	Nars2	100	53.704	Mus_caroli
ENSCING00000004008	-	99	39.623	ENSMUSG00000018995	Nars2	100	53.704	Mus_musculus
ENSCING00000004008	-	85	41.045	MGP_PahariEiJ_G0013217	Nars2	100	51.852	Mus_pahari
ENSCING00000004008	-	99	39.623	MGP_SPRETEiJ_G0031106	Nars2	100	53.704	Mus_spretus
ENSCING00000004008	-	96	42.232	ENSMPUG00000008031	NARS2	95	42.232	Mustela_putorius_furo
ENSCING00000004008	-	96	41.138	ENSMLUG00000030064	NARS2	95	41.138	Myotis_lucifugus
ENSCING00000004008	-	95	43.080	ENSNGAG00000000914	Nars2	92	43.080	Nannospalax_galili
ENSCING00000004008	-	92	41.284	ENSNBRG00000002261	nars2	89	41.284	Neolamprologus_brichardi
ENSCING00000004008	-	96	41.357	ENSNLEG00000016643	NARS2	99	45.783	Nomascus_leucogenys
ENSCING00000004008	-	64	50.000	ENSMEUG00000015733	-	62	50.000	Notamacropus_eugenii
ENSCING00000004008	-	67	48.293	ENSOPRG00000013361	NARS2	66	48.293	Ochotona_princeps
ENSCING00000004008	-	96	43.326	ENSODEG00000004856	NARS2	95	43.326	Octodon_degus
ENSCING00000004008	-	96	41.830	ENSONIG00000005718	nars2	96	41.830	Oreochromis_niloticus
ENSCING00000004008	-	81	33.420	ENSOANG00000001381	NARS2	99	31.591	Ornithorhynchus_anatinus
ENSCING00000004008	-	96	41.357	ENSOCUG00000017469	NARS2	95	41.357	Oryctolagus_cuniculus
ENSCING00000004008	-	96	41.228	ENSORLG00000002778	nars2	93	41.228	Oryzias_latipes
ENSCING00000004008	-	96	41.447	ENSORLG00020015748	nars2	96	40.858	Oryzias_latipes_hni
ENSCING00000004008	-	98	40.851	ENSORLG00015021491	nars2	96	40.851	Oryzias_latipes_hsok
ENSCING00000004008	-	96	41.009	ENSOMEG00000001474	nars2	92	41.009	Oryzias_melastigma
ENSCING00000004008	-	96	42.451	ENSOGAG00000011914	NARS2	95	42.451	Otolemur_garnettii
ENSCING00000004008	-	95	43.430	ENSOARG00000006276	NARS2	93	43.430	Ovis_aries
ENSCING00000004008	-	99	40.890	ENSPPAG00000028317	NARS2	99	46.586	Pan_paniscus
ENSCING00000004008	-	96	43.167	ENSPPRG00000001838	NARS2	95	43.167	Panthera_pardus
ENSCING00000004008	-	96	43.167	ENSPTIG00000008940	NARS2	95	43.167	Panthera_tigris_altaica
ENSCING00000004008	-	96	41.794	ENSPTRG00000004117	NARS2	99	46.586	Pan_troglodytes
ENSCING00000004008	-	96	41.794	ENSPANG00000025887	NARS2	95	41.794	Papio_anubis
ENSCING00000004008	-	97	41.522	ENSPKIG00000015253	nars2	94	41.522	Paramormyrops_kingsleyae
ENSCING00000004008	-	99	43.220	ENSPSIG00000003892	NARS2	98	43.220	Pelodiscus_sinensis
ENSCING00000004008	-	92	40.868	ENSPMGG00000016063	nars2	100	41.553	Periophthalmus_magnuspinnatus
ENSCING00000004008	-	99	40.881	ENSPEMG00000012439	Nars2	98	40.881	Peromyscus_maniculatus_bairdii
ENSCING00000004008	-	71	54.545	ENSPCIG00000004095	NARS2	88	54.545	Phascolarctos_cinereus
ENSCING00000004008	-	96	42.544	ENSPFOG00000003990	nars2	93	42.544	Poecilia_formosa
ENSCING00000004008	-	96	42.763	ENSPLAG00000015627	nars2	93	42.763	Poecilia_latipinna
ENSCING00000004008	-	96	42.544	ENSPMEG00000010031	nars2	93	42.544	Poecilia_mexicana
ENSCING00000004008	-	96	42.544	ENSPREG00000014861	nars2	93	42.544	Poecilia_reticulata
ENSCING00000004008	-	96	38.950	ENSPPYG00000003725	NARS2	94	38.950	Pongo_abelii
ENSCING00000004008	-	66	36.977	ENSPCAG00000014692	NARS2	64	36.977	Procavia_capensis
ENSCING00000004008	-	80	45.423	ENSPCOG00000025785	NARS2	93	45.423	Propithecus_coquereli
ENSCING00000004008	-	78	42.041	ENSPVAG00000013265	NARS2	85	42.041	Pteropus_vampyrus
ENSCING00000004008	-	97	39.913	ENSPNYG00000009495	nars2	94	39.913	Pundamilia_nyererei
ENSCING00000004008	-	97	43.167	ENSPNAG00000011197	nars2	94	43.167	Pygocentrus_nattereri
ENSCING00000004008	-	99	38.784	ENSRNOG00000011476	Nars2	98	38.784	Rattus_norvegicus
ENSCING00000004008	-	93	42.466	ENSRBIG00000040493	NARS2	99	46.586	Rhinopithecus_bieti
ENSCING00000004008	-	93	42.694	ENSRROG00000044898	NARS2	99	46.586	Rhinopithecus_roxellana
ENSCING00000004008	-	91	38.428	YCR024C	-	91	38.428	Saccharomyces_cerevisiae
ENSCING00000004008	-	96	42.888	ENSSBOG00000020638	NARS2	95	42.888	Saimiri_boliviensis_boliviensis
ENSCING00000004008	-	97	41.485	ENSSHAG00000017901	NARS2	95	41.485	Sarcophilus_harrisii
ENSCING00000004008	-	98	39.785	ENSSFOG00015005504	nars2	96	39.785	Scleropages_formosus
ENSCING00000004008	-	96	41.667	ENSSMAG00000001927	nars2	93	41.667	Scophthalmus_maximus
ENSCING00000004008	-	96	42.013	ENSSDUG00000013432	nars2	93	42.013	Seriola_dumerili
ENSCING00000004008	-	96	41.667	ENSSLDG00000022896	nars2	93	41.667	Seriola_lalandi_dorsalis
ENSCING00000004008	-	75	36.364	ENSSARG00000000932	-	79	36.364	Sorex_araneus
ENSCING00000004008	-	98	39.309	ENSSPUG00000012642	NARS2	96	39.309	Sphenodon_punctatus
ENSCING00000004008	-	96	41.667	ENSSPAG00000006472	nars2	96	40.590	Stegastes_partitus
ENSCING00000004008	-	95	41.648	ENSSSCG00000014893	-	92	41.648	Sus_scrofa
ENSCING00000004008	-	96	43.982	ENSTGUG00000013001	NARS2	99	43.982	Taeniopygia_guttata
ENSCING00000004008	-	99	40.213	ENSTRUG00000013557	nars2	97	40.213	Takifugu_rubripes
ENSCING00000004008	-	96	41.667	ENSTNIG00000019041	nars2	95	41.667	Tetraodon_nigroviridis
ENSCING00000004008	-	96	33.554	ENSTBEG00000011582	NARS2	94	33.554	Tupaia_belangeri
ENSCING00000004008	-	96	36.105	ENSTTRG00000014631	NARS2	95	36.105	Tursiops_truncatus
ENSCING00000004008	-	52	42.126	ENSUAMG00000010543	-	99	42.126	Ursus_americanus
ENSCING00000004008	-	96	43.384	ENSUMAG00000011459	NARS2	95	43.384	Ursus_maritimus
ENSCING00000004008	-	96	38.731	ENSVPAG00000005565	NARS2	98	38.731	Vicugna_pacos
ENSCING00000004008	-	96	43.326	ENSVVUG00000022842	NARS2	77	43.326	Vulpes_vulpes
ENSCING00000004008	-	93	37.838	ENSXETG00000010455	nars2	91	37.838	Xenopus_tropicalis
ENSCING00000004008	-	97	39.696	ENSXCOG00000006508	nars2	99	39.696	Xiphophorus_couchianus
ENSCING00000004008	-	96	41.886	ENSXMAG00000015442	nars2	93	41.886	Xiphophorus_maculatus