EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000004012 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: ATP-dependent DNA helicase Q1-like
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 7193 bases
Position: chr1:5111178-5118370
Accession: 100187076
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000008258	ResIII	PF04851.15	1.4e-06	1	1
ENSCINP00000008261	ResIII	PF04851.15	1.5e-06	1	1
ENSCINP00000008261	DEAD	PF00270.29	2.5e-19	1	1
ENSCINP00000008258	DEAD	PF00270.29	2.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000008261	-	2431	XM_002131555	ENSCINP00000008261	584 (aa)	XP_002131591	F6VB95
ENSCINT00000008258	-	2119	-	ENSCINP00000008258	622 (aa)	-	F6VXL3

Gene Model

Click here to download ENSCING00000004012's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000004012's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000004012	-	92	46.691	ENSG00000004700	RECQL	95	44.231	Homo_sapiens
ENSCING00000004012	-	96	43.967	ENSAMEG00000016233	RECQL	91	43.967	Ailuropoda_melanoleuca
ENSCING00000004012	-	92	42.833	ENSACIG00000020781	recql	91	43.101	Amphilophus_citrinellus
ENSCING00000004012	-	86	47.255	ENSAOCG00000010244	recql	90	43.826	Amphiprion_ocellaris
ENSCING00000004012	-	89	46.080	ENSAPEG00000002040	recql	91	42.954	Amphiprion_percula
ENSCING00000004012	-	92	43.493	ENSATEG00000023342	recql	91	43.493	Anabas_testudineus
ENSCING00000004012	-	88	48.256	ENSAPLG00000003404	RECQL	87	45.855	Anas_platyrhynchos
ENSCING00000004012	-	72	49.778	ENSACAG00000017383	RECQL	99	49.778	Anolis_carolinensis
ENSCING00000004012	-	92	46.520	ENSANAG00000035372	RECQL	88	45.034	Aotus_nancymaae
ENSCING00000004012	-	92	43.537	ENSACLG00000021416	recql	92	41.224	Astatotilapia_calliptera
ENSCING00000004012	-	91	43.623	ENSAMXG00000014249	recql	91	41.000	Astyanax_mexicanus
ENSCING00000004012	-	93	44.521	ENSBTAG00000021083	RECQL	88	44.521	Bos_taurus
ENSCING00000004012	-	92	42.341	WBGene00019334	K02F3.12	93	42.341	Caenorhabditis_elegans
ENSCING00000004012	-	93	44.710	ENSCJAG00000044420	RECQL	89	44.710	Callithrix_jacchus
ENSCING00000004012	-	93	44.692	ENSCAFG00000012221	RECQL	89	44.692	Canis_familiaris
ENSCING00000004012	-	93	44.692	ENSCAFG00020007872	RECQL	89	44.692	Canis_lupus_dingo
ENSCING00000004012	-	93	44.349	ENSCHIG00000024281	RECQL	90	44.349	Capra_hircus
ENSCING00000004012	-	93	44.027	ENSTSYG00000009224	RECQL	89	44.027	Carlito_syrichta
ENSCING00000004012	-	92	44.923	ENSCPOG00000024644	RECQL	88	44.923	Cavia_porcellus
ENSCING00000004012	-	92	46.520	ENSCCAG00000028085	RECQL	88	44.974	Cebus_capucinus
ENSCING00000004012	-	93	45.189	ENSCATG00000036038	RECQL	89	44.803	Cercocebus_atys
ENSCING00000004012	-	99	43.062	ENSCLAG00000014618	RECQL	94	43.062	Chinchilla_lanigera
ENSCING00000004012	-	92	44.905	ENSCSAG00000007974	RECQL	88	44.750	Chlorocebus_sabaeus
ENSCING00000004012	-	75	53.535	ENSCHOG00000002452	RECQL	68	53.535	Choloepus_hoffmanni
ENSCING00000004012	-	90	46.127	ENSCPBG00000009109	RECQL	86	46.127	Chrysemys_picta_bellii
ENSCING00000004012	-	92	73.993	ENSCSAVG00000011052	-	100	72.617	Ciona_savignyi
ENSCING00000004012	-	93	45.189	ENSCANG00000035259	RECQL	89	45.034	Colobus_angolensis_palliatus
ENSCING00000004012	-	93	45.361	ENSCGRG00001015141	Recql	90	45.361	Cricetulus_griseus_chok1gshd
ENSCING00000004012	-	93	45.361	ENSCGRG00000003545	Recql	90	45.361	Cricetulus_griseus_crigri
ENSCING00000004012	-	93	41.468	ENSCSEG00000015932	recql	93	41.468	Cynoglossus_semilaevis
ENSCING00000004012	-	92	45.138	ENSCVAG00000014613	recql	91	43.924	Cyprinodon_variegatus
ENSCING00000004012	-	93	42.203	ENSDARG00000007175	recql	92	42.203	Danio_rerio
ENSCING00000004012	-	76	51.020	ENSDNOG00000013557	RECQL	96	49.163	Dasypus_novemcinctus
ENSCING00000004012	-	93	44.103	ENSDORG00000015884	Recql	99	41.860	Dipodomys_ordii
ENSCING00000004012	-	92	40.753	ENSETEG00000018631	-	89	40.753	Echinops_telfairi
ENSCING00000004012	-	93	44.974	ENSEASG00005014041	RECQL	92	48.326	Equus_asinus_asinus
ENSCING00000004012	-	92	46.337	ENSECAG00000024762	RECQL	79	45.145	Equus_caballus
ENSCING00000004012	-	92	43.053	ENSELUG00000011528	recql	90	43.053	Esox_lucius
ENSCING00000004012	-	93	44.351	ENSFCAG00000030888	RECQL	90	44.351	Felis_catus
ENSCING00000004012	-	91	46.442	ENSFALG00000002635	RECQL	89	44.774	Ficedula_albicollis
ENSCING00000004012	-	92	44.406	ENSFDAG00000019693	RECQL	88	44.406	Fukomys_damarensis
ENSCING00000004012	-	92	43.151	ENSFHEG00000014563	recql	91	43.151	Fundulus_heteroclitus
ENSCING00000004012	-	86	41.502	ENSGMOG00000010504	recql	100	41.502	Gadus_morhua
ENSCING00000004012	-	87	48.444	ENSGALG00000013174	RECQL	88	45.641	Gallus_gallus
ENSCING00000004012	-	92	42.955	ENSGACG00000001005	recql	96	43.056	Gasterosteus_aculeatus
ENSCING00000004012	-	90	45.150	ENSGAGG00000025428	RECQL	86	45.150	Gopherus_agassizii
ENSCING00000004012	-	92	46.507	ENSGGOG00000010985	RECQL	88	45.034	Gorilla_gorilla
ENSCING00000004012	-	92	43.537	ENSHBUG00000001341	recql	91	43.537	Haplochromis_burtoni
ENSCING00000004012	-	92	46.583	ENSHGLG00000009712	RECQL	90	44.674	Heterocephalus_glaber_female
ENSCING00000004012	-	92	45.095	ENSHGLG00100015306	RECQL	89	45.095	Heterocephalus_glaber_male
ENSCING00000004012	-	96	41.983	ENSHCOG00000012735	recql	93	41.983	Hippocampus_comes
ENSCING00000004012	-	91	44.030	ENSIPUG00000024092	recql	89	39.902	Ictalurus_punctatus
ENSCING00000004012	-	92	41.237	ENSSTOG00000006328	RECQL	88	41.237	Ictidomys_tridecemlineatus
ENSCING00000004012	-	92	43.718	ENSJJAG00000017339	Recql	94	42.461	Jaculus_jaculus
ENSCING00000004012	-	92	42.736	ENSKMAG00000011232	recql	91	42.568	Kryptolebias_marmoratus
ENSCING00000004012	-	87	45.331	ENSLBEG00000023652	recql	89	42.539	Labrus_bergylta
ENSCING00000004012	-	92	44.750	ENSLACG00000011482	RECQL	90	44.750	Latimeria_chalumnae
ENSCING00000004012	-	95	35.489	ENSLOCG00000015393	recql	91	35.489	Lepisosteus_oculatus
ENSCING00000004012	-	88	47.776	ENSLAFG00000000963	RECQL	85	45.714	Loxodonta_africana
ENSCING00000004012	-	93	44.674	ENSMFAG00000031470	RECQL	89	44.521	Macaca_fascicularis
ENSCING00000004012	-	93	44.674	ENSMMUG00000010857	RECQL	88	44.521	Macaca_mulatta
ENSCING00000004012	-	93	44.674	ENSMNEG00000031827	RECQL	89	44.521	Macaca_nemestrina
ENSCING00000004012	-	93	45.189	ENSMLEG00000039659	RECQL	95	45.034	Mandrillus_leucophaeus
ENSCING00000004012	-	87	46.304	ENSMAMG00000023289	recql	90	43.103	Mastacembelus_armatus
ENSCING00000004012	-	92	43.537	ENSMZEG00005016027	recql	91	43.537	Maylandia_zebra
ENSCING00000004012	-	96	44.793	ENSMGAG00000013629	RECQL	91	44.793	Meleagris_gallopavo
ENSCING00000004012	-	75	56.140	ENSMAUG00000010642	Recql	99	39.521	Mesocricetus_auratus
ENSCING00000004012	-	93	45.486	ENSMICG00000002664	RECQL	90	45.486	Microcebus_murinus
ENSCING00000004012	-	93	44.597	ENSMOCG00000007093	Recql	92	44.597	Microtus_ochrogaster
ENSCING00000004012	-	91	42.957	ENSMMOG00000007279	recql	90	42.142	Mola_mola
ENSCING00000004012	-	93	44.915	ENSMODG00000017805	RECQL	88	44.915	Monodelphis_domestica
ENSCING00000004012	-	94	41.833	ENSMALG00000004415	recql	92	42.185	Monopterus_albus
ENSCING00000004012	-	93	44.444	MGP_CAROLIEiJ_G0029030	Recql	99	38.824	Mus_caroli
ENSCING00000004012	-	92	47.232	ENSMUSG00000030243	Recql	99	40.588	Mus_musculus
ENSCING00000004012	-	93	44.444	MGP_PahariEiJ_G0022791	Recql	92	44.444	Mus_pahari
ENSCING00000004012	-	92	46.679	MGP_SPRETEiJ_G0030085	Recql	99	39.412	Mus_spretus
ENSCING00000004012	-	93	44.746	ENSMPUG00000000202	RECQL	89	44.746	Mustela_putorius_furo
ENSCING00000004012	-	92	46.520	ENSMLUG00000005741	RECQL	88	45.145	Myotis_lucifugus
ENSCING00000004012	-	92	47.124	ENSNGAG00000010997	-	89	45.205	Nannospalax_galili
ENSCING00000004012	-	93	36.286	ENSNGAG00000020417	-	87	36.286	Nannospalax_galili
ENSCING00000004012	-	92	43.612	ENSNBRG00000020825	recql	92	44.274	Neolamprologus_brichardi
ENSCING00000004012	-	92	46.691	ENSNLEG00000004797	RECQL	88	45.205	Nomascus_leucogenys
ENSCING00000004012	-	96	46.903	ENSOPRG00000007493	RECQL	98	45.380	Ochotona_princeps
ENSCING00000004012	-	100	42.881	ENSODEG00000010240	RECQL	99	42.105	Octodon_degus
ENSCING00000004012	-	92	43.537	ENSONIG00000001694	recql	91	43.537	Oreochromis_niloticus
ENSCING00000004012	-	60	33.618	ENSOANG00000021930	-	100	34.795	Ornithorhynchus_anatinus
ENSCING00000004012	-	92	46.950	ENSOCUG00000008787	RECQL	89	45.051	Oryctolagus_cuniculus
ENSCING00000004012	-	88	47.195	ENSORLG00000012853	recql	92	41.789	Oryzias_latipes
ENSCING00000004012	-	88	47.195	ENSORLG00020020245	recql	91	43.857	Oryzias_latipes_hni
ENSCING00000004012	-	88	47.195	ENSORLG00015018708	recql	91	43.857	Oryzias_latipes_hsok
ENSCING00000004012	-	88	46.602	ENSOMEG00000019484	recql	92	43.027	Oryzias_melastigma
ENSCING00000004012	-	92	45.656	ENSOGAG00000004754	RECQL	88	44.887	Otolemur_garnettii
ENSCING00000004012	-	93	44.521	ENSOARG00000020343	RECQL	88	44.521	Ovis_aries
ENSCING00000004012	-	92	46.507	ENSPPAG00000030306	RECQL	86	46.057	Pan_paniscus
ENSCING00000004012	-	92	45.971	ENSPPRG00000010371	RECQL	90	44.351	Panthera_pardus
ENSCING00000004012	-	92	45.971	ENSPTIG00000008593	RECQL	88	44.870	Panthera_tigris_altaica
ENSCING00000004012	-	92	46.691	ENSPTRG00000004758	RECQL	87	45.205	Pan_troglodytes
ENSCING00000004012	-	93	45.189	ENSPANG00000003394	RECQL	89	44.692	Papio_anubis
ENSCING00000004012	-	93	43.836	ENSPKIG00000008072	recql	90	43.836	Paramormyrops_kingsleyae
ENSCING00000004012	-	90	45.775	ENSPSIG00000002979	RECQL	85	45.775	Pelodiscus_sinensis
ENSCING00000004012	-	92	42.196	ENSPMGG00000011010	recql	90	42.367	Periophthalmus_magnuspinnatus
ENSCING00000004012	-	93	45.000	ENSPEMG00000016418	Recql	94	45.359	Peromyscus_maniculatus_bairdii
ENSCING00000004012	-	92	43.151	ENSPMAG00000005495	recql	96	43.151	Petromyzon_marinus
ENSCING00000004012	-	93	44.923	ENSPCIG00000022452	RECQL	89	45.034	Phascolarctos_cinereus
ENSCING00000004012	-	91	45.018	ENSPFOG00000000940	recql	89	43.643	Poecilia_formosa
ENSCING00000004012	-	91	44.834	ENSPLAG00000006194	recql	88	43.471	Poecilia_latipinna
ENSCING00000004012	-	91	45.018	ENSPMEG00000013399	recql	89	43.151	Poecilia_mexicana
ENSCING00000004012	-	91	45.018	ENSPREG00000012991	recql	90	43.643	Poecilia_reticulata
ENSCING00000004012	-	92	46.507	ENSPPYG00000004352	RECQL	88	45.034	Pongo_abelii
ENSCING00000004012	-	75	56.566	ENSPCOG00000027353	RECQL	76	56.566	Propithecus_coquereli
ENSCING00000004012	-	89	48.099	ENSPVAG00000002457	RECQL	81	48.099	Pteropus_vampyrus
ENSCING00000004012	-	92	43.367	ENSPNYG00000016013	recql	91	43.367	Pundamilia_nyererei
ENSCING00000004012	-	93	42.295	ENSPNAG00000029317	recql	90	42.295	Pygocentrus_nattereri
ENSCING00000004012	-	92	43.696	ENSRNOG00000012602	Recql	91	47.854	Rattus_norvegicus
ENSCING00000004012	-	93	44.845	ENSRBIG00000034966	RECQL	89	44.692	Rhinopithecus_bieti
ENSCING00000004012	-	93	44.845	ENSRROG00000010234	RECQL	89	44.692	Rhinopithecus_roxellana
ENSCING00000004012	-	92	46.337	ENSSBOG00000005645	RECQL	88	44.804	Saimiri_boliviensis_boliviensis
ENSCING00000004012	-	93	44.406	ENSSHAG00000015815	RECQL	88	45.267	Sarcophilus_harrisii
ENSCING00000004012	-	93	43.782	ENSSFOG00015002537	recql	90	43.782	Scleropages_formosus
ENSCING00000004012	-	94	41.148	ENSSMAG00000014910	recql	93	41.060	Scophthalmus_maximus
ENSCING00000004012	-	92	42.542	ENSSDUG00000019205	recql	91	42.640	Seriola_dumerili
ENSCING00000004012	-	92	42.542	ENSSLDG00000013921	recql	91	42.640	Seriola_lalandi_dorsalis
ENSCING00000004012	-	92	39.002	ENSSPUG00000018613	RECQL	90	38.475	Sphenodon_punctatus
ENSCING00000004012	-	86	46.078	ENSSPAG00000008384	recql	91	42.735	Stegastes_partitus
ENSCING00000004012	-	93	44.845	ENSSSCG00000000580	RECQL	88	48.441	Sus_scrofa
ENSCING00000004012	-	91	46.274	ENSTGUG00000011730	RECQL	90	45.302	Taeniopygia_guttata
ENSCING00000004012	-	92	42.931	ENSTRUG00000000534	recql	99	43.672	Takifugu_rubripes
ENSCING00000004012	-	92	41.753	ENSTNIG00000007242	recql	92	42.347	Tetraodon_nigroviridis
ENSCING00000004012	-	76	47.216	ENSTBEG00000004653	RECQL	69	47.216	Tupaia_belangeri
ENSCING00000004012	-	79	48.696	ENSTTRG00000003296	RECQL	78	43.590	Tursiops_truncatus
ENSCING00000004012	-	91	44.580	ENSUAMG00000003261	RECQL	88	44.580	Ursus_americanus
ENSCING00000004012	-	93	43.782	ENSUMAG00000001523	RECQL	90	43.782	Ursus_maritimus
ENSCING00000004012	-	91	47.477	ENSVPAG00000007546	RECQL	81	47.477	Vicugna_pacos
ENSCING00000004012	-	93	44.692	ENSVVUG00000001101	RECQL	89	44.692	Vulpes_vulpes
ENSCING00000004012	-	78	45.217	ENSXETG00000013524	recql	88	45.435	Xenopus_tropicalis
ENSCING00000004012	-	92	43.127	ENSXMAG00000029316	recql	90	43.127	Xiphophorus_maculatus