EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000004062 (Gene tree)
Gene ID: 100184318
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 5085 bases
Position: chr1:900576-905660
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000008414	RRM_1	PF00076.22	2.2e-35	1	2
ENSCINP00000008414	RRM_1	PF00076.22	2.2e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000008414	-	1006	-	ENSCINP00000008414	324 (aa)	-	F6Z145

Gene Model

Click here to download ENSCING00000004062's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000004062's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000004062	-	52	39.548	WBGene00019249	H28G03.1	55	39.548	Caenorhabditis_elegans
ENSCING00000004062	-	82	72.792	ENSCSAVG00000000472	-	99	89.894	Ciona_savignyi
ENSCING00000004062	-	55	46.328	ENSMMOG00000004241	-	86	46.328	Mola_mola
ENSCING00000004062	-	55	46.893	ENSNBRG00000014522	-	77	46.893	Neolamprologus_brichardi
ENSCING00000004062	-	55	44.633	ENSSLDG00000024705	-	78	44.633	Seriola_lalandi_dorsalis