EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000004125 (Gene tree)
Gene ID: 100183917
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 13333 bases
Position: chrHT000066.1:7545-20877
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000008504	Wyosine_form	PF08608.12	8.7e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000008504	-	1697	-	ENSCINP00000008504	558 (aa)	-	F6V9G2

Gene Model

Click here to download ENSCING00000004125's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000004125's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000004125	-	97	53.130	ENSG00000277149	TYW1B	69	63.492	Homo_sapiens
ENSCING00000004125	-	97	59.560	ENSG00000198874	TYW1	66	72.751	Homo_sapiens
ENSCING00000004125	-	97	60.177	ENSAPOG00000014391	tyw1	84	59.331	Acanthochromis_polyacanthus
ENSCING00000004125	-	97	59.796	ENSACIG00000007325	tyw1	82	58.773	Amphilophus_citrinellus
ENSCING00000004125	-	97	58.249	ENSAOCG00000016792	tyw1	79	58.725	Amphiprion_ocellaris
ENSCING00000004125	-	97	58.148	ENSAPEG00000015939	tyw1	87	58.562	Amphiprion_percula
ENSCING00000004125	-	87	58.022	ENSATEG00000006856	tyw1	74	55.514	Anabas_testudineus
ENSCING00000004125	-	97	59.729	ENSANAG00000037051	-	66	72.222	Aotus_nancymaae
ENSCING00000004125	-	97	58.754	ENSACLG00000018688	tyw1	79	59.259	Astatotilapia_calliptera
ENSCING00000004125	-	97	59.831	ENSAMXG00000004157	tyw1	86	59.459	Astyanax_mexicanus
ENSCING00000004125	-	97	60.914	ENSBTAG00000008446	TYW1	80	60.914	Bos_taurus
ENSCING00000004125	-	97	60.644	ENSCJAG00000004295	-	79	60.823	Callithrix_jacchus
ENSCING00000004125	-	97	62.039	ENSCAFG00000010867	-	79	62.039	Canis_familiaris
ENSCING00000004125	-	97	54.371	ENSCAFG00020005367	-	84	54.545	Canis_lupus_dingo
ENSCING00000004125	-	97	61.083	ENSCHIG00000019510	-	80	61.083	Capra_hircus
ENSCING00000004125	-	86	60.566	ENSTSYG00000008236	-	85	56.792	Carlito_syrichta
ENSCING00000004125	-	97	54.146	ENSCAPG00000013569	-	92	53.390	Cavia_aperea
ENSCING00000004125	-	97	58.194	ENSCPOG00000011182	-	64	73.585	Cavia_porcellus
ENSCING00000004125	-	97	60.068	ENSCCAG00000026643	-	66	72.751	Cebus_capucinus
ENSCING00000004125	-	97	60.068	ENSCATG00000043677	-	66	73.280	Cercocebus_atys
ENSCING00000004125	-	97	59.423	ENSCLAG00000006321	-	65	74.462	Chinchilla_lanigera
ENSCING00000004125	-	87	59.850	ENSCSAG00000018274	-	64	73.280	Chlorocebus_sabaeus
ENSCING00000004125	-	97	63.555	ENSCPBG00000014896	-	76	63.669	Chrysemys_picta_bellii
ENSCING00000004125	-	97	72.679	ENSCSAVG00000005712	-	92	72.401	Ciona_savignyi
ENSCING00000004125	-	97	60.237	ENSCANG00000033209	-	66	73.280	Colobus_angolensis_palliatus
ENSCING00000004125	-	72	67.536	ENSCGRG00001003679	Tyw1	63	73.190	Cricetulus_griseus_chok1gshd
ENSCING00000004125	-	97	59.694	ENSCSEG00000005810	tyw1	77	59.114	Cynoglossus_semilaevis
ENSCING00000004125	-	87	59.357	ENSCVAG00000001054	tyw1	75	60.566	Cyprinodon_variegatus
ENSCING00000004125	-	97	58.992	ENSDARG00000062987	tyw1	78	59.865	Danio_rerio
ENSCING00000004125	-	97	60.847	ENSDNOG00000024165	-	65	73.262	Dasypus_novemcinctus
ENSCING00000004125	-	97	53.311	ENSDORG00000014772	Tyw1	86	53.873	Dipodomys_ordii
ENSCING00000004125	-	65	67.317	ENSEBUG00000004494	tyw1	68	67.317	Eptatretus_burgeri
ENSCING00000004125	-	97	60.135	ENSEASG00005008818	-	80	58.883	Equus_asinus_asinus
ENSCING00000004125	-	97	57.539	ENSECAG00000023164	-	79	59.489	Equus_caballus
ENSCING00000004125	-	97	58.347	ENSELUG00000008449	tyw1	70	72.905	Esox_lucius
ENSCING00000004125	-	97	63.445	ENSFCAG00000014262	-	79	62.917	Felis_catus
ENSCING00000004125	-	97	58.722	ENSFALG00000013810	-	80	58.204	Ficedula_albicollis
ENSCING00000004125	-	97	57.429	ENSFHEG00000020824	tyw1	79	57.763	Fundulus_heteroclitus
ENSCING00000004125	-	97	59.528	ENSGALG00000001110	-	79	59.865	Gallus_gallus
ENSCING00000004125	-	97	57.718	ENSGACG00000012692	tyw1	81	58.221	Gasterosteus_aculeatus
ENSCING00000004125	-	97	63.489	ENSGAGG00000022393	-	79	63.849	Gopherus_agassizii
ENSCING00000004125	-	86	50.189	ENSGGOG00000001473	TYW1	78	49.805	Gorilla_gorilla
ENSCING00000004125	-	97	58.754	ENSHBUG00000002640	tyw1	79	59.259	Haplochromis_burtoni
ENSCING00000004125	-	97	61.101	ENSHGLG00000012093	-	91	61.455	Heterocephalus_glaber_female
ENSCING00000004125	-	97	58.557	ENSHGLG00100011743	TYW1	66	73.315	Heterocephalus_glaber_male
ENSCING00000004125	-	97	60.507	ENSHCOG00000019949	tyw1	79	60.507	Hippocampus_comes
ENSCING00000004125	-	97	60.580	ENSIPUG00000016330	tyw1	78	60.206	Ictalurus_punctatus
ENSCING00000004125	-	97	59.966	ENSSTOG00000004067	-	73	58.773	Ictidomys_tridecemlineatus
ENSCING00000004125	-	97	60.068	ENSJJAG00000022959	Tyw1	66	72.654	Jaculus_jaculus
ENSCING00000004125	-	97	59.428	ENSKMAG00000018599	tyw1	79	59.328	Kryptolebias_marmoratus
ENSCING00000004125	-	97	55.853	ENSLACG00000018917	tyw1	65	66.667	Latimeria_chalumnae
ENSCING00000004125	-	97	60.068	ENSMFAG00000035457	-	66	73.280	Macaca_fascicularis
ENSCING00000004125	-	97	60.068	ENSMMUG00000030374	-	85	56.942	Macaca_mulatta
ENSCING00000004125	-	97	60.068	ENSMNEG00000041992	-	66	73.280	Macaca_nemestrina
ENSCING00000004125	-	97	60.068	ENSMLEG00000039741	-	66	73.280	Mandrillus_leucophaeus
ENSCING00000004125	-	97	59.291	ENSMAMG00000016089	tyw1	84	56.799	Mastacembelus_armatus
ENSCING00000004125	-	97	59.932	ENSMZEG00005024386	tyw1	86	58.834	Maylandia_zebra
ENSCING00000004125	-	97	59.197	ENSMGAG00000002176	-	80	59.696	Meleagris_gallopavo
ENSCING00000004125	-	97	58.081	ENSMAUG00000002959	Tyw1	81	58.744	Mesocricetus_auratus
ENSCING00000004125	-	97	60.540	ENSMICG00000014374	-	85	57.043	Microcebus_murinus
ENSCING00000004125	-	97	59.661	ENSMOCG00000017720	Tyw1	81	59.661	Microtus_ochrogaster
ENSCING00000004125	-	97	58.657	ENSMMOG00000005064	tyw1	80	59.494	Mola_mola
ENSCING00000004125	-	91	68.116	ENSMODG00000025697	-	66	72.032	Monodelphis_domestica
ENSCING00000004125	-	97	58.081	ENSMALG00000010238	tyw1	79	58.418	Monopterus_albus
ENSCING00000004125	-	97	58.404	MGP_CAROLIEiJ_G0027801	Tyw1	81	58.574	Mus_caroli
ENSCING00000004125	-	97	58.574	ENSMUSG00000056310	Tyw1	81	58.234	Mus_musculus
ENSCING00000004125	-	97	59.727	MGP_PahariEiJ_G0024383	Tyw1	81	58.532	Mus_pahari
ENSCING00000004125	-	97	58.574	MGP_SPRETEiJ_G0028799	Tyw1	81	58.404	Mus_spretus
ENSCING00000004125	-	97	61.620	ENSMPUG00000016191	-	84	60.174	Mustela_putorius_furo
ENSCING00000004125	-	97	57.718	ENSMLUG00000013582	-	81	56.040	Myotis_lucifugus
ENSCING00000004125	-	97	59.863	ENSNGAG00000002742	Tyw1	82	59.691	Nannospalax_galili
ENSCING00000004125	-	97	60.424	ENSNBRG00000016996	tyw1	84	60.036	Neolamprologus_brichardi
ENSCING00000004125	-	97	59.122	ENSNLEG00000013210	-	64	71.958	Nomascus_leucogenys
ENSCING00000004125	-	74	65.500	ENSOPRG00000008734	-	55	65.500	Ochotona_princeps
ENSCING00000004125	-	97	55.688	ENSODEG00000014729	-	85	56.000	Octodon_degus
ENSCING00000004125	-	97	58.983	ENSONIG00000005872	tyw1	79	58.305	Oreochromis_niloticus
ENSCING00000004125	-	57	71.473	ENSOANG00000008147	-	96	71.473	Ornithorhynchus_anatinus
ENSCING00000004125	-	97	60.575	ENSOCUG00000003173	-	80	59.966	Oryctolagus_cuniculus
ENSCING00000004125	-	97	61.111	ENSORLG00000001393	tyw1	79	60.932	Oryzias_latipes
ENSCING00000004125	-	97	61.002	ENSORLG00020019361	tyw1	79	60.498	Oryzias_latipes_hni
ENSCING00000004125	-	97	58.744	ENSORLG00015008095	tyw1	81	56.866	Oryzias_latipes_hsok
ENSCING00000004125	-	97	59.359	ENSOGAG00000016555	-	80	59.167	Otolemur_garnettii
ENSCING00000004125	-	97	61.074	ENSOARG00000010673	-	80	61.074	Ovis_aries
ENSCING00000004125	-	97	62.917	ENSPPRG00000004945	-	80	62.390	Panthera_pardus
ENSCING00000004125	-	97	62.917	ENSPTIG00000019545	-	80	62.390	Panthera_tigris_altaica
ENSCING00000004125	-	97	54.027	ENSPTRG00000023076	TYW1B	83	51.670	Pan_troglodytes
ENSCING00000004125	-	97	59.898	ENSPANG00000019053	-	84	56.766	Papio_anubis
ENSCING00000004125	-	97	60.000	ENSPKIG00000006545	tyw1	78	58.377	Paramormyrops_kingsleyae
ENSCING00000004125	-	97	57.143	ENSPMGG00000004240	tyw1	84	56.146	Periophthalmus_magnuspinnatus
ENSCING00000004125	-	97	58.475	ENSPEMG00000008274	Tyw1	81	58.305	Peromyscus_maniculatus_bairdii
ENSCING00000004125	-	97	58.893	ENSPFOG00000015855	tyw1	81	57.886	Poecilia_formosa
ENSCING00000004125	-	97	60.753	ENSPLAG00000000838	tyw1	84	60.753	Poecilia_latipinna
ENSCING00000004125	-	97	58.885	ENSPMEG00000019437	tyw1	83	58.261	Poecilia_mexicana
ENSCING00000004125	-	97	57.168	ENSPREG00000018773	tyw1	79	57.746	Poecilia_reticulata
ENSCING00000004125	-	97	59.222	ENSPPYG00000017514	TYW1	66	72.487	Pongo_abelii
ENSCING00000004125	-	87	52.710	ENSPCOG00000015294	-	84	47.850	Propithecus_coquereli
ENSCING00000004125	-	97	58.754	ENSPNYG00000022381	tyw1	79	59.259	Pundamilia_nyererei
ENSCING00000004125	-	97	59.898	ENSPNAG00000009001	tyw1	80	59.560	Pygocentrus_nattereri
ENSCING00000004125	-	97	59.423	ENSRNOG00000024352	Tyw1	81	58.744	Rattus_norvegicus
ENSCING00000004125	-	97	60.371	ENSRBIG00000039619	-	67	73.016	Rhinopithecus_bieti
ENSCING00000004125	-	97	60.237	ENSRROG00000039780	-	69	73.016	Rhinopithecus_roxellana
ENSCING00000004125	-	94	47.417	YPL207W	-	62	46.097	Saccharomyces_cerevisiae
ENSCING00000004125	-	97	58.883	ENSSBOG00000025873	-	66	71.958	Saimiri_boliviensis_boliviensis
ENSCING00000004125	-	97	60.381	ENSSHAG00000010346	-	82	60.622	Sarcophilus_harrisii
ENSCING00000004125	-	97	61.485	ENSSFOG00015001054	tyw1	86	59.194	Scleropages_formosus
ENSCING00000004125	-	97	59.492	ENSSMAG00000020514	tyw1	79	58.814	Scophthalmus_maximus
ENSCING00000004125	-	97	59.729	ENSSDUG00000001552	tyw1	83	58.814	Seriola_dumerili
ENSCING00000004125	-	97	58.667	ENSSLDG00000003554	tyw1	79	57.763	Seriola_lalandi_dorsalis
ENSCING00000004125	-	97	60.522	ENSSPUG00000002715	-	79	60.279	Sphenodon_punctatus
ENSCING00000004125	-	97	60.914	ENSSSCG00000007733	-	80	60.914	Sus_scrofa
ENSCING00000004125	-	87	60.571	ENSTGUG00000003428	-	79	60.381	Taeniopygia_guttata
ENSCING00000004125	-	97	59.291	ENSTRUG00000016107	tyw1	77	59.291	Takifugu_rubripes
ENSCING00000004125	-	97	59.106	ENSTNIG00000018999	tyw1	90	58.140	Tetraodon_nigroviridis
ENSCING00000004125	-	97	62.214	ENSUMAG00000015343	-	83	60.976	Ursus_maritimus
ENSCING00000004125	-	97	61.972	ENSVVUG00000016457	-	79	61.972	Vulpes_vulpes
ENSCING00000004125	-	97	61.083	ENSXETG00000010094	tyw1	80	60.914	Xenopus_tropicalis
ENSCING00000004125	-	97	61.284	ENSXMAG00000013125	tyw1	87	60.734	Xiphophorus_maculatus