EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000004147 (Gene tree)
Gene ID: 100183169
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 1716 bases
Position: chr2:80880-82595
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000008570	DEAD	PF00270.29	3.3e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000008570	-	1716	-	ENSCINP00000008570	572 (aa)	-	F6UHH9

Gene Model

Click here to download ENSCING00000004147's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000004147's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000004147	-	90	62.715	ENSG00000100201	DDX17	71	92.500	Homo_sapiens
ENSCING00000004147	-	79	67.692	ENSAPOG00000017303	si:dkey-156n14.5	69	68.161	Acanthochromis_polyacanthus
ENSCING00000004147	-	90	62.476	ENSAMEG00000010601	DDX17	61	69.575	Ailuropoda_melanoleuca
ENSCING00000004147	-	81	67.097	ENSAOCG00000004874	si:dkey-156n14.5	69	68.834	Amphiprion_ocellaris
ENSCING00000004147	-	81	66.882	ENSAPEG00000018317	si:dkey-156n14.5	69	68.610	Amphiprion_percula
ENSCING00000004147	-	77	69.178	ENSATEG00000021733	si:dkey-156n14.5	71	68.694	Anabas_testudineus
ENSCING00000004147	-	80	68.860	ENSAPLG00000014334	-	75	69.575	Anas_platyrhynchos
ENSCING00000004147	-	71	71.744	ENSANAG00000035052	DDX17	67	70.673	Aotus_nancymaae
ENSCING00000004147	-	79	67.692	ENSACLG00000015887	si:dkey-156n14.5	68	68.161	Astatotilapia_calliptera
ENSCING00000004147	-	80	69.451	ENSACLG00000015882	DDX17	71	70.682	Astatotilapia_calliptera
ENSCING00000004147	-	94	61.213	ENSBTAG00000009887	DDX17	88	71.545	Bos_taurus
ENSCING00000004147	-	82	56.838	WBGene00010260	ddx-17	80	57.589	Caenorhabditis_elegans
ENSCING00000004147	-	94	61.243	ENSCJAG00000011797	DDX17	87	71.545	Callithrix_jacchus
ENSCING00000004147	-	94	61.029	ENSCAFG00000001395	DDX17	69	69.575	Canis_familiaris
ENSCING00000004147	-	94	61.029	ENSCAFG00020002867	DDX17	88	71.545	Canis_lupus_dingo
ENSCING00000004147	-	90	62.906	ENSCHIG00000021332	DDX17	88	71.545	Capra_hircus
ENSCING00000004147	-	95	61.011	ENSTSYG00000001303	DDX17	91	71.545	Carlito_syrichta
ENSCING00000004147	-	90	62.715	ENSCPOG00000011790	DDX17	88	71.545	Cavia_porcellus
ENSCING00000004147	-	94	61.029	ENSCCAG00000024116	DDX17	90	71.545	Cebus_capucinus
ENSCING00000004147	-	90	62.715	ENSCATG00000035701	DDX17	88	71.545	Cercocebus_atys
ENSCING00000004147	-	80	68.043	ENSCLAG00000017294	DDX17	88	71.545	Chinchilla_lanigera
ENSCING00000004147	-	94	61.029	ENSCSAG00000006649	DDX17	69	69.575	Chlorocebus_sabaeus
ENSCING00000004147	-	77	70.159	ENSCHOG00000001931	DDX17	61	69.351	Choloepus_hoffmanni
ENSCING00000004147	-	74	51.508	ENSCING00000008750	-	75	51.508	Ciona_intestinalis
ENSCING00000004147	-	90	62.715	ENSCANG00000002348	DDX17	88	71.545	Colobus_angolensis_palliatus
ENSCING00000004147	-	77	70.387	ENSCGRG00001023050	Ddx17	69	69.575	Cricetulus_griseus_chok1gshd
ENSCING00000004147	-	77	70.387	ENSCGRG00000007756	Ddx17	69	69.575	Cricetulus_griseus_crigri
ENSCING00000004147	-	67	69.330	ENSCSEG00000011351	si:dkey-156n14.5	90	70.509	Cynoglossus_semilaevis
ENSCING00000004147	-	77	69.091	ENSCVAG00000010921	si:dkey-156n14.5	69	68.304	Cyprinodon_variegatus
ENSCING00000004147	-	77	70.455	ENSDARG00000010873	DDX17	90	72.554	Danio_rerio
ENSCING00000004147	-	90	62.524	ENSDNOG00000006499	DDX17	61	69.575	Dasypus_novemcinctus
ENSCING00000004147	-	90	58.891	ENSDORG00000003358	Ddx17	69	69.575	Dipodomys_ordii
ENSCING00000004147	-	78	61.659	FBgn0035720	CG10077	78	62.228	Drosophila_melanogaster
ENSCING00000004147	-	94	61.213	ENSEASG00005018767	DDX17	80	62.906	Equus_asinus_asinus
ENSCING00000004147	-	94	61.213	ENSECAG00000025110	DDX17	88	71.545	Equus_caballus
ENSCING00000004147	-	90	62.476	ENSFCAG00000031570	DDX17	88	71.545	Felis_catus
ENSCING00000004147	-	77	70.387	ENSFALG00000012560	DDX17	61	69.575	Ficedula_albicollis
ENSCING00000004147	-	81	68.251	ENSFDAG00000009967	DDX17	70	69.575	Fukomys_damarensis
ENSCING00000004147	-	77	70.387	ENSGALG00000037360	DDX17	68	69.575	Gallus_gallus
ENSCING00000004147	-	95	50.262	ENSGACG00000019151	si:dkey-156n14.5	71	57.718	Gasterosteus_aculeatus
ENSCING00000004147	-	94	61.243	ENSGGOG00000008309	DDX17	88	71.545	Gorilla_gorilla
ENSCING00000004147	-	79	67.473	ENSHBUG00000021303	si:dkey-156n14.5	68	67.937	Haplochromis_burtoni
ENSCING00000004147	-	80	69.451	ENSHBUG00000022268	DDX17	88	69.298	Haplochromis_burtoni
ENSCING00000004147	-	90	62.715	ENSHGLG00000012568	DDX17	61	69.575	Heterocephalus_glaber_female
ENSCING00000004147	-	90	62.715	ENSHGLG00100011291	DDX17	88	71.545	Heterocephalus_glaber_male
ENSCING00000004147	-	78	69.536	ENSIPUG00000015768	si:dkey-156n14.5	92	72.283	Ictalurus_punctatus
ENSCING00000004147	-	90	62.906	ENSSTOG00000013699	DDX17	71	62.524	Ictidomys_tridecemlineatus
ENSCING00000004147	-	90	62.524	ENSJJAG00000011350	Ddx17	62	69.575	Jaculus_jaculus
ENSCING00000004147	-	90	62.715	ENSMFAG00000046051	DDX17	88	71.545	Macaca_fascicularis
ENSCING00000004147	-	90	62.715	ENSMMUG00000004304	DDX17	88	71.545	Macaca_mulatta
ENSCING00000004147	-	90	62.715	ENSMNEG00000022218	DDX17	88	71.545	Macaca_nemestrina
ENSCING00000004147	-	90	62.715	ENSMLEG00000029141	DDX17	88	71.545	Mandrillus_leucophaeus
ENSCING00000004147	-	77	67.352	ENSMAMG00000008427	si:dkey-156n14.5	68	66.816	Mastacembelus_armatus
ENSCING00000004147	-	79	67.692	ENSMZEG00005009937	si:dkey-156n14.5	68	68.161	Maylandia_zebra
ENSCING00000004147	-	80	68.172	ENSMGAG00000012423	DDX17	88	77.174	Meleagris_gallopavo
ENSCING00000004147	-	61	62.108	ENSMAUG00000020476	Ddx17	84	62.464	Mesocricetus_auratus
ENSCING00000004147	-	90	62.667	ENSMICG00000011601	DDX17	88	71.545	Microcebus_murinus
ENSCING00000004147	-	77	68.109	ENSMOCG00000010769	Ddx17	62	67.338	Microtus_ochrogaster
ENSCING00000004147	-	71	66.422	ENSMMOG00000007416	si:dkey-156n14.5	87	69.355	Mola_mola
ENSCING00000004147	-	67	69.351	ENSMMOG00000002806	-	90	70.924	Mola_mola
ENSCING00000004147	-	94	61.213	ENSMODG00000009681	DDX17	83	62.906	Monodelphis_domestica
ENSCING00000004147	-	77	68.636	ENSMALG00000002485	si:dkey-156n14.5	70	67.857	Monopterus_albus
ENSCING00000004147	-	77	70.387	MGP_CAROLIEiJ_G0020017	Ddx17	69	69.575	Mus_caroli
ENSCING00000004147	-	77	70.387	ENSMUSG00000055065	Ddx17	91	71.545	Mus_musculus
ENSCING00000004147	-	77	70.387	MGP_PahariEiJ_G0020019	Ddx17	69	69.575	Mus_pahari
ENSCING00000004147	-	77	70.387	MGP_SPRETEiJ_G0020915	Ddx17	69	69.575	Mus_spretus
ENSCING00000004147	-	94	61.029	ENSMPUG00000013125	DDX17	69	69.575	Mustela_putorius_furo
ENSCING00000004147	-	94	61.091	ENSMLUG00000013151	DDX17	79	63.372	Myotis_lucifugus
ENSCING00000004147	-	77	70.387	ENSNGAG00000004001	Ddx17	69	69.575	Nannospalax_galili
ENSCING00000004147	-	73	67.229	ENSNBRG00000002592	DDX17	85	71.698	Neolamprologus_brichardi
ENSCING00000004147	-	67	68.912	ENSNBRG00000020059	-	88	70.081	Neolamprologus_brichardi
ENSCING00000004147	-	94	61.314	ENSNLEG00000015117	DDX17	88	71.545	Nomascus_leucogenys
ENSCING00000004147	-	69	68.957	ENSMEUG00000009627	DDX17	58	71.545	Notamacropus_eugenii
ENSCING00000004147	-	94	61.765	ENSOPRG00000014734	DDX17	71	62.524	Ochotona_princeps
ENSCING00000004147	-	90	58.254	ENSODEG00000013118	DDX17	61	64.302	Octodon_degus
ENSCING00000004147	-	81	66.309	ENSONIG00000018880	si:dkey-156n14.5	89	70.380	Oreochromis_niloticus
ENSCING00000004147	-	94	61.581	ENSOCUG00000004982	DDX17	69	69.575	Oryctolagus_cuniculus
ENSCING00000004147	-	81	67.679	ENSORLG00000013685	si:dkey-156n14.5	69	68.527	Oryzias_latipes
ENSCING00000004147	-	81	67.679	ENSORLG00020021743	si:dkey-156n14.5	69	68.527	Oryzias_latipes_hni
ENSCING00000004147	-	81	67.462	ENSORLG00015022548	si:dkey-156n14.5	69	68.304	Oryzias_latipes_hsok
ENSCING00000004147	-	95	64.242	ENSOMEG00000009515	si:dkey-156n14.5	72	68.304	Oryzias_melastigma
ENSCING00000004147	-	94	60.989	ENSOGAG00000001539	DDX17	80	62.667	Otolemur_garnettii
ENSCING00000004147	-	94	61.426	ENSOARG00000015489	DDX17	82	62.906	Ovis_aries
ENSCING00000004147	-	94	61.243	ENSPPAG00000042301	DDX17	88	71.545	Pan_paniscus
ENSCING00000004147	-	90	62.476	ENSPPRG00000008444	DDX17	60	69.575	Panthera_pardus
ENSCING00000004147	-	95	61.121	ENSPTIG00000008733	DDX17	89	71.545	Panthera_tigris_altaica
ENSCING00000004147	-	94	61.243	ENSPTRG00000014369	DDX17	88	71.545	Pan_troglodytes
ENSCING00000004147	-	94	61.314	ENSPANG00000015143	DDX17	88	71.545	Papio_anubis
ENSCING00000004147	-	77	70.320	ENSPKIG00000002575	si:dkey-156n14.5	66	69.731	Paramormyrops_kingsleyae
ENSCING00000004147	-	78	69.710	ENSPKIG00000007831	DDX17	67	69.866	Paramormyrops_kingsleyae
ENSCING00000004147	-	77	70.387	ENSPEMG00000021115	Ddx17	69	69.575	Peromyscus_maniculatus_bairdii
ENSCING00000004147	-	92	59.754	ENSPCIG00000001652	DDX17	80	62.906	Phascolarctos_cinereus
ENSCING00000004147	-	77	69.091	ENSPREG00000000506	si:dkey-156n14.5	69	68.304	Poecilia_reticulata
ENSCING00000004147	-	94	61.029	ENSPPYG00000011821	DDX17	69	69.575	Pongo_abelii
ENSCING00000004147	-	90	62.715	ENSPCAG00000011672	DDX17	62	69.575	Procavia_capensis
ENSCING00000004147	-	96	60.753	ENSPCOG00000014360	DDX17	88	71.545	Propithecus_coquereli
ENSCING00000004147	-	90	62.715	ENSPVAG00000010133	DDX17	61	69.575	Pteropus_vampyrus
ENSCING00000004147	-	84	67.083	ENSPNYG00000019669	-	70	70.455	Pundamilia_nyererei
ENSCING00000004147	-	79	67.473	ENSPNYG00000005694	si:dkey-156n14.5	69	67.937	Pundamilia_nyererei
ENSCING00000004147	-	80	68.928	ENSPNAG00000029948	si:dkey-156n14.5	89	72.554	Pygocentrus_nattereri
ENSCING00000004147	-	77	70.387	ENSRNOG00000051170	Ddx17	69	69.575	Rattus_norvegicus
ENSCING00000004147	-	90	62.715	ENSRBIG00000031437	DDX17	86	70.370	Rhinopithecus_bieti
ENSCING00000004147	-	94	61.029	ENSRROG00000045378	DDX17	88	71.545	Rhinopithecus_roxellana
ENSCING00000004147	-	87	55.888	YNL112W	-	88	54.890	Saccharomyces_cerevisiae
ENSCING00000004147	-	90	55.977	ENSSBOG00000024547	DDX17	59	61.915	Saimiri_boliviensis_boliviensis
ENSCING00000004147	-	92	59.860	ENSSHAG00000004578	DDX17	82	62.786	Sarcophilus_harrisii
ENSCING00000004147	-	79	69.845	ENSSFOG00015012308	ddx17	66	70.179	Scleropages_formosus
ENSCING00000004147	-	81	66.523	ENSSMAG00000007794	si:dkey-156n14.5	69	67.478	Scophthalmus_maximus
ENSCING00000004147	-	80	69.803	ENSSMAG00000005509	DDX17	69	70.628	Scophthalmus_maximus
ENSCING00000004147	-	79	67.473	ENSSPAG00000017130	si:dkey-156n14.5	69	67.937	Stegastes_partitus
ENSCING00000004147	-	67	70.130	ENSSPAG00000019808	-	91	71.739	Stegastes_partitus
ENSCING00000004147	-	94	61.213	ENSSSCG00000000104	DDX17	88	71.545	Sus_scrofa
ENSCING00000004147	-	77	70.387	ENSTGUG00000010391	DDX17	68	69.575	Taeniopygia_guttata
ENSCING00000004147	-	81	66.594	ENSTRUG00000021931	si:dkey-156n14.5	70	67.713	Takifugu_rubripes
ENSCING00000004147	-	94	60.146	ENSTTRG00000005623	DDX17	82	61.568	Tursiops_truncatus
ENSCING00000004147	-	96	60.971	ENSUAMG00000007290	DDX17	89	70.387	Ursus_americanus
ENSCING00000004147	-	84	63.673	ENSVPAG00000001476	DDX17	57	71.256	Vicugna_pacos
ENSCING00000004147	-	68	69.487	ENSVVUG00000022762	DDX17	88	71.545	Vulpes_vulpes
ENSCING00000004147	-	92	61.878	ENSXETG00000006900	ddx17	87	62.852	Xenopus_tropicalis
ENSCING00000004147	-	77	68.934	ENSXMAG00000005078	si:dkey-156n14.5	69	68.304	Xiphophorus_maculatus