EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000004178 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2343 bases
Position: chr2:168997-171339
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000008636	CwfJ_C_1	PF04677.15	3.2e-38	1	1
ENSCINP00000008636	CwfJ_C_2	PF04676.14	6.6e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000008636	-	2301	-	ENSCINP00000008636	767 (aa)	-	F7BP62

Gene Model

Click here to download ENSCING00000004178's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000004178's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000004178	-	89	47.653	ENSG00000152404	CWF19L2	80	47.653	Homo_sapiens
ENSCING00000004178	-	52	45.854	ENSAPOG00000001559	cwf19l2	95	39.623	Acanthochromis_polyacanthus
ENSCING00000004178	-	66	41.777	ENSAMEG00000015500	-	83	42.911	Ailuropoda_melanoleuca
ENSCING00000004178	-	67	40.713	ENSAOCG00000017629	cwf19l2	90	40.490	Amphiprion_ocellaris
ENSCING00000004178	-	67	41.321	ENSAPEG00000016319	cwf19l2	98	41.210	Amphiprion_percula
ENSCING00000004178	-	74	43.631	ENSATEG00000008079	cwf19l2	80	37.525	Anabas_testudineus
ENSCING00000004178	-	95	43.258	ENSAPLG00000016072	CWF19L2	87	42.751	Anas_platyrhynchos
ENSCING00000004178	-	93	42.293	ENSACAG00000010946	CWF19L2	95	42.135	Anolis_carolinensis
ENSCING00000004178	-	98	42.541	ENSANAG00000032022	CWF19L2	88	42.694	Aotus_nancymaae
ENSCING00000004178	-	69	46.269	ENSAMXG00000003771	cwf19l2	68	45.679	Astyanax_mexicanus
ENSCING00000004178	-	92	48.175	ENSBTAG00000018629	CWF19L2	83	46.387	Bos_taurus
ENSCING00000004178	-	57	36.961	WBGene00015156	B0361.2	89	46.154	Caenorhabditis_elegans
ENSCING00000004178	-	97	42.205	ENSCJAG00000009951	CWF19L2	75	47.912	Callithrix_jacchus
ENSCING00000004178	-	69	47.891	ENSCAFG00000014718	CWF19L2	92	41.103	Canis_familiaris
ENSCING00000004178	-	69	47.891	ENSCAFG00020008885	CWF19L2	92	41.103	Canis_lupus_dingo
ENSCING00000004178	-	96	41.856	ENSCHIG00000013182	CWF19L2	88	41.714	Capra_hircus
ENSCING00000004178	-	89	47.775	ENSTSYG00000007885	CWF19L2	79	47.307	Carlito_syrichta
ENSCING00000004178	-	66	42.884	ENSCCAG00000034828	-	88	42.205	Cebus_capucinus
ENSCING00000004178	-	98	42.520	ENSCATG00000044106	CWF19L2	86	42.520	Cercocebus_atys
ENSCING00000004178	-	98	44.316	ENSCLAG00000013844	CWF19L2	96	44.316	Chinchilla_lanigera
ENSCING00000004178	-	90	47.196	ENSCSAG00000003032	CWF19L2	80	47.196	Chlorocebus_sabaeus
ENSCING00000004178	-	89	48.104	ENSCPBG00000018618	CWF19L2	78	47.867	Chrysemys_picta_bellii
ENSCING00000004178	-	99	66.710	ENSCSAVG00000010997	-	99	67.564	Ciona_savignyi
ENSCING00000004178	-	98	41.794	ENSCANG00000038906	CWF19L2	80	47.294	Colobus_angolensis_palliatus
ENSCING00000004178	-	85	47.045	ENSCGRG00001010585	Cwf19l2	77	46.809	Cricetulus_griseus_chok1gshd
ENSCING00000004178	-	85	47.045	ENSCGRG00000003923	Cwf19l2	77	46.809	Cricetulus_griseus_crigri
ENSCING00000004178	-	83	45.926	ENSCVAG00000006942	cwf19l2	89	39.502	Cyprinodon_variegatus
ENSCING00000004178	-	88	44.622	ENSDARG00000091760	cwf19l2	82	41.667	Danio_rerio
ENSCING00000004178	-	86	47.783	ENSDNOG00000004526	CWF19L2	77	47.783	Dasypus_novemcinctus
ENSCING00000004178	-	52	38.406	FBgn0030655	CG9213	69	34.170	Drosophila_melanogaster
ENSCING00000004178	-	65	42.857	ENSETEG00000013508	CWF19L2	73	42.857	Echinops_telfairi
ENSCING00000004178	-	84	35.082	ENSEBUG00000015330	cwf19l2	77	47.213	Eptatretus_burgeri
ENSCING00000004178	-	79	43.249	ENSEASG00005011011	CWF19L2	91	42.407	Equus_asinus_asinus
ENSCING00000004178	-	77	54.028	ENSECAG00000004314	CWF19L2	90	54.028	Equus_caballus
ENSCING00000004178	-	73	55.612	ENSEEUG00000011057	CWF19L2	79	55.612	Erinaceus_europaeus
ENSCING00000004178	-	90	48.175	ENSFCAG00000045471	CWF19L2	91	40.517	Felis_catus
ENSCING00000004178	-	88	42.518	ENSFALG00000000479	CWF19L2	82	43.013	Ficedula_albicollis
ENSCING00000004178	-	98	42.832	ENSFDAG00000017395	CWF19L2	94	42.301	Fukomys_damarensis
ENSCING00000004178	-	87	45.324	ENSFHEG00000003686	cwf19l2	77	45.084	Fundulus_heteroclitus
ENSCING00000004178	-	81	44.776	ENSGMOG00000002651	cwf19l2	84	44.988	Gadus_morhua
ENSCING00000004178	-	66	41.948	ENSGALG00000017171	CWF19L2	62	42.293	Gallus_gallus
ENSCING00000004178	-	61	42.718	ENSGAFG00000009635	CWF19L2	96	31.587	Gambusia_affinis
ENSCING00000004178	-	86	44.938	ENSGACG00000008165	cwf19l2	73	45.146	Gasterosteus_aculeatus
ENSCING00000004178	-	89	47.867	ENSGAGG00000024936	CWF19L2	79	47.630	Gopherus_agassizii
ENSCING00000004178	-	89	47.183	ENSGGOG00000000049	CWF19L2	80	47.183	Gorilla_gorilla
ENSCING00000004178	-	52	45.679	ENSHBUG00000011926	cwf19l2	73	45.455	Haplochromis_burtoni
ENSCING00000004178	-	90	46.411	ENSHCOG00000015378	cwf19l2	75	46.635	Hippocampus_comes
ENSCING00000004178	-	83	47.654	ENSIPUG00000002246	cwf19l2	72	47.407	Ictalurus_punctatus
ENSCING00000004178	-	82	46.078	ENSKMAG00000008417	cwf19l2	84	41.746	Kryptolebias_marmoratus
ENSCING00000004178	-	84	47.002	ENSLBEG00000019215	cwf19l2	79	41.055	Labrus_bergylta
ENSCING00000004178	-	88	49.635	ENSLACG00000009803	CWF19L2	97	40.940	Latimeria_chalumnae
ENSCING00000004178	-	97	42.287	ENSLOCG00000006855	cwf19l2	76	47.529	Lepisosteus_oculatus
ENSCING00000004178	-	86	47.794	ENSLAFG00000004402	CWF19L2	97	40.480	Loxodonta_africana
ENSCING00000004178	-	89	47.059	ENSMFAG00000038804	CWF19L2	80	47.059	Macaca_fascicularis
ENSCING00000004178	-	89	47.059	ENSMMUG00000013724	CWF19L2	80	47.059	Macaca_mulatta
ENSCING00000004178	-	98	39.504	ENSMNEG00000038771	CWF19L2	90	39.504	Macaca_nemestrina
ENSCING00000004178	-	89	47.059	ENSMLEG00000035335	CWF19L2	80	47.059	Mandrillus_leucophaeus
ENSCING00000004178	-	98	40.485	ENSMAMG00000007109	cwf19l2	82	40.374	Mastacembelus_armatus
ENSCING00000004178	-	81	48.157	ENSMGAG00000015157	CWF19L2	75	47.666	Meleagris_gallopavo
ENSCING00000004178	-	75	36.825	ENSMAUG00000013819	Cwf19l2	64	36.190	Mesocricetus_auratus
ENSCING00000004178	-	84	42.911	ENSMICG00000010853	CWF19L2	91	42.533	Microcebus_murinus
ENSCING00000004178	-	53	48.049	ENSMOCG00000010389	Cwf19l2	79	47.561	Microtus_ochrogaster
ENSCING00000004178	-	66	42.056	ENSMODG00000014689	CWF19L2	94	42.351	Monodelphis_domestica
ENSCING00000004178	-	84	45.564	ENSMALG00000020243	cwf19l2	83	39.630	Monopterus_albus
ENSCING00000004178	-	72	45.161	MGP_CAROLIEiJ_G0031737	Cwf19l2	78	44.700	Mus_caroli
ENSCING00000004178	-	70	45.803	ENSMUSG00000025898	Cwf19l2	76	45.324	Mus_musculus
ENSCING00000004178	-	70	46.062	MGP_PahariEiJ_G0014616	Cwf19l2	77	45.823	Mus_pahari
ENSCING00000004178	-	70	46.172	MGP_SPRETEiJ_G0032857	Cwf19l2	76	45.933	Mus_spretus
ENSCING00000004178	-	98	41.913	ENSMPUG00000006145	CWF19L2	96	41.913	Mustela_putorius_furo
ENSCING00000004178	-	89	48.411	ENSMLUG00000017181	CWF19L2	80	48.166	Myotis_lucifugus
ENSCING00000004178	-	89	44.131	ENSNLEG00000007213	CWF19L2	79	44.131	Nomascus_leucogenys
ENSCING00000004178	-	65	44.226	ENSMEUG00000015369	-	68	43.735	Notamacropus_eugenii
ENSCING00000004178	-	63	41.176	ENSOPRG00000011222	-	66	41.176	Ochotona_princeps
ENSCING00000004178	-	52	46.173	ENSONIG00000005068	cwf19l2	85	40.290	Oreochromis_niloticus
ENSCING00000004178	-	85	41.887	ENSOANG00000021142	CWF19L2	80	41.698	Ornithorhynchus_anatinus
ENSCING00000004178	-	86	48.478	ENSOCUG00000025398	CWF19L2	74	49.020	Oryctolagus_cuniculus
ENSCING00000004178	-	83	45.652	ENSORLG00000010487	cwf19l2	92	40.338	Oryzias_latipes
ENSCING00000004178	-	83	45.894	ENSORLG00020015904	cwf19l2	92	40.454	Oryzias_latipes_hni
ENSCING00000004178	-	83	45.652	ENSORLG00015023297	cwf19l2	92	40.338	Oryzias_latipes_hsok
ENSCING00000004178	-	82	46.324	ENSOMEG00000000039	cwf19l2	86	41.321	Oryzias_melastigma
ENSCING00000004178	-	66	41.996	ENSOGAG00000011628	CWF19L2	92	41.996	Otolemur_garnettii
ENSCING00000004178	-	83	47.689	ENSOARG00000010043	CWF19L2	75	47.549	Ovis_aries
ENSCING00000004178	-	89	47.418	ENSPPAG00000023443	CWF19L2	80	47.418	Pan_paniscus
ENSCING00000004178	-	74	47.523	ENSPPRG00000012736	CWF19L2	84	43.053	Panthera_pardus
ENSCING00000004178	-	74	47.523	ENSPTIG00000011569	CWF19L2	84	43.053	Panthera_tigris_altaica
ENSCING00000004178	-	89	47.418	ENSPTRG00000004239	CWF19L2	80	47.418	Pan_troglodytes
ENSCING00000004178	-	89	47.059	ENSPANG00000012746	CWF19L2	80	47.059	Papio_anubis
ENSCING00000004178	-	99	40.344	ENSPKIG00000023622	cwf19l2	76	47.059	Paramormyrops_kingsleyae
ENSCING00000004178	-	99	40.000	ENSPSIG00000011670	CWF19L2	94	39.750	Pelodiscus_sinensis
ENSCING00000004178	-	87	46.919	ENSPEMG00000022399	Cwf19l2	76	46.778	Peromyscus_maniculatus_bairdii
ENSCING00000004178	-	94	46.244	ENSPMAG00000007158	cwf19l2	97	39.146	Petromyzon_marinus
ENSCING00000004178	-	83	47.666	ENSPCIG00000002556	CWF19L2	74	47.174	Phascolarctos_cinereus
ENSCING00000004178	-	99	40.223	ENSPFOG00000001312	cwf19l2	88	40.858	Poecilia_formosa
ENSCING00000004178	-	99	40.344	ENSPLAG00000008540	cwf19l2	88	40.230	Poecilia_latipinna
ENSCING00000004178	-	99	39.771	ENSPMEG00000016990	cwf19l2	88	40.481	Poecilia_mexicana
ENSCING00000004178	-	83	46.617	ENSPREG00000020945	cwf19l2	86	41.722	Poecilia_reticulata
ENSCING00000004178	-	88	47.971	ENSPPYG00000003833	CWF19L2	78	47.971	Pongo_abelii
ENSCING00000004178	-	59	42.363	ENSPCAG00000011399	CWF19L2	64	44.954	Procavia_capensis
ENSCING00000004178	-	83	40.870	ENSPVAG00000006046	CWF19L2	97	40.555	Pteropus_vampyrus
ENSCING00000004178	-	98	36.716	ENSRNOG00000024372	Cwf19l2	99	35.367	Rattus_norvegicus
ENSCING00000004178	-	98	42.323	ENSRBIG00000029230	CWF19L2	86	42.323	Rhinopithecus_bieti
ENSCING00000004178	-	83	47.895	ENSRROG00000018309	CWF19L2	77	47.895	Rhinopithecus_roxellana
ENSCING00000004178	-	84	41.935	ENSSBOG00000033647	CWF19L2	93	41.935	Saimiri_boliviensis_boliviensis
ENSCING00000004178	-	86	47.666	ENSSHAG00000014582	CWF19L2	78	47.174	Sarcophilus_harrisii
ENSCING00000004178	-	65	37.654	ENSSFOG00015003191	cwf19l2	70	40.614	Scleropages_formosus
ENSCING00000004178	-	82	44.363	ENSSMAG00000018965	cwf19l2	73	44.498	Scophthalmus_maximus
ENSCING00000004178	-	52	43.552	ENSSDUG00000001587	cwf19l2	84	39.372	Seriola_dumerili
ENSCING00000004178	-	54	38.170	ENSSARG00000006673	-	69	38.170	Sorex_araneus
ENSCING00000004178	-	52	46.098	ENSSPAG00000012481	cwf19l2	81	42.286	Stegastes_partitus
ENSCING00000004178	-	73	40.433	ENSSSCG00000028201	CWF19L2	99	40.266	Sus_scrofa
ENSCING00000004178	-	97	40.909	ENSTRUG00000007225	cwf19l2	85	41.098	Takifugu_rubripes
ENSCING00000004178	-	74	37.745	ENSTNIG00000003190	cwf19l2	98	37.745	Tetraodon_nigroviridis
ENSCING00000004178	-	58	59.211	ENSTBEG00000005085	CWF19L2	64	59.211	Tupaia_belangeri
ENSCING00000004178	-	71	46.353	ENSTTRG00000006960	CWF19L2	74	46.118	Tursiops_truncatus
ENSCING00000004178	-	98	43.954	ENSUMAG00000008758	CWF19L2	98	37.201	Ursus_maritimus
ENSCING00000004178	-	62	43.570	ENSVPAG00000004929	-	65	43.307	Vicugna_pacos
ENSCING00000004178	-	89	46.959	ENSXETG00000018483	cwf19l2	80	46.472	Xenopus_tropicalis
ENSCING00000004178	-	73	45.215	ENSXMAG00000010875	cwf19l2	89	39.633	Xiphophorus_maculatus