EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000004199 (Gene tree)
Gene ID: 100186238
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 2540 bases
Position: chr12:4213109-4215648
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000008672	IF4E	PF01652.18	4.7e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000008672	-	1175	-	ENSCINP00000008672	225 (aa)	-	F7B4V3

Gene Model

Click here to download ENSCING00000004199's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03013	RNA transport	KEGG
cin04150	mTOR signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000004199's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000004199	-	80	62.431	ENSG00000175766	EIF4E1B	75	62.431	Homo_sapiens
ENSCING00000004199	-	78	57.542	ENSAMEG00000007196	EIF4E1B	71	57.542	Ailuropoda_melanoleuca
ENSCING00000004199	-	80	64.088	ENSACAG00000007055	EIF4E1B	97	64.088	Anolis_carolinensis
ENSCING00000004199	-	80	62.983	ENSANAG00000024720	EIF4E1B	76	62.983	Aotus_nancymaae
ENSCING00000004199	-	86	49.495	ENSAMXG00000043293	eif4e1b	90	49.495	Astyanax_mexicanus
ENSCING00000004199	-	89	55.500	ENSBTAG00000003103	EIF4E1B	92	53.488	Bos_taurus
ENSCING00000004199	-	80	62.983	ENSCJAG00000007291	EIF4E1B	76	62.983	Callithrix_jacchus
ENSCING00000004199	-	80	62.983	ENSCAFG00000016643	EIF4E1B	77	62.983	Canis_familiaris
ENSCING00000004199	-	83	61.290	ENSCAFG00020011562	EIF4E1B	84	61.290	Canis_lupus_dingo
ENSCING00000004199	-	83	58.602	ENSCHIG00000006321	EIF4E1B	95	58.289	Capra_hircus
ENSCING00000004199	-	81	58.242	ENSTSYG00000025856	EIF4E1B	92	53.333	Carlito_syrichta
ENSCING00000004199	-	76	56.140	ENSCAPG00000011182	EIF4E1B	76	56.140	Cavia_aperea
ENSCING00000004199	-	78	61.932	ENSCPOG00000004429	EIF4E1B	74	60.773	Cavia_porcellus
ENSCING00000004199	-	80	61.878	ENSCCAG00000008488	EIF4E1B	76	61.878	Cebus_capucinus
ENSCING00000004199	-	80	61.878	ENSCATG00000036544	EIF4E1B	74	61.878	Cercocebus_atys
ENSCING00000004199	-	78	61.364	ENSCLAG00000013384	EIF4E1B	92	71.875	Chinchilla_lanigera
ENSCING00000004199	-	78	62.500	ENSCSAG00000009203	EIF4E1B	73	61.326	Chlorocebus_sabaeus
ENSCING00000004199	-	58	57.252	ENSCPBG00000022627	EIF4E1B	99	57.252	Chrysemys_picta_bellii
ENSCING00000004199	-	80	62.431	ENSCANG00000031424	EIF4E1B	74	62.431	Colobus_angolensis_palliatus
ENSCING00000004199	-	81	59.890	ENSCGRG00001003887	Eif4e1b	96	55.944	Cricetulus_griseus_chok1gshd
ENSCING00000004199	-	50	48.214	ENSCGRG00000017018	-	98	48.214	Cricetulus_griseus_crigri
ENSCING00000004199	-	80	61.326	ENSDARG00000014565	eif4e1b	97	61.236	Danio_rerio
ENSCING00000004199	-	80	61.878	ENSDNOG00000032189	EIF4E1B	68	61.878	Dasypus_novemcinctus
ENSCING00000004199	-	80	58.564	ENSDORG00000016043	Eif4e1b	87	64.948	Dipodomys_ordii
ENSCING00000004199	-	77	54.335	ENSEBUG00000014777	eif4e1b	84	56.069	Eptatretus_burgeri
ENSCING00000004199	-	78	64.205	ENSEASG00005012081	EIF4E1B	74	62.983	Equus_asinus_asinus
ENSCING00000004199	-	80	62.983	ENSECAG00000022357	EIF4E1B	66	62.983	Equus_caballus
ENSCING00000004199	-	80	55.866	ENSEEUG00000005920	EIF4E1B	93	55.866	Erinaceus_europaeus
ENSCING00000004199	-	79	62.921	ENSELUG00000021695	eif4e1b	76	62.921	Esox_lucius
ENSCING00000004199	-	80	61.878	ENSFCAG00000003074	EIF4E1B	92	52.361	Felis_catus
ENSCING00000004199	-	81	62.295	ENSFALG00000008607	EIF4E1B	95	55.349	Ficedula_albicollis
ENSCING00000004199	-	80	61.326	ENSFDAG00000008704	EIF4E1B	73	61.326	Fukomys_damarensis
ENSCING00000004199	-	84	61.905	ENSGALG00000026037	EIF4E1B	74	61.905	Gallus_gallus
ENSCING00000004199	-	64	58.741	ENSGAGG00000012675	EIF4E1B	96	58.741	Gopherus_agassizii
ENSCING00000004199	-	80	62.431	ENSGGOG00000015854	EIF4E1B	75	62.431	Gorilla_gorilla
ENSCING00000004199	-	80	61.326	ENSHGLG00000016879	-	82	70.297	Heterocephalus_glaber_female
ENSCING00000004199	-	78	54.545	ENSHGLG00100012839	-	50	54.545	Heterocephalus_glaber_male
ENSCING00000004199	-	81	60.989	ENSIPUG00000020654	eif4e1b	84	60.989	Ictalurus_punctatus
ENSCING00000004199	-	80	58.011	ENSSTOG00000002002	EIF4E1B	94	50.218	Ictidomys_tridecemlineatus
ENSCING00000004199	-	80	59.116	ENSJJAG00000017541	Eif4e1b	74	59.116	Jaculus_jaculus
ENSCING00000004199	-	99	52.889	ENSLOCG00000011832	eif4e1b	99	52.889	Lepisosteus_oculatus
ENSCING00000004199	-	78	55.682	ENSLAFG00000027919	EIF4E1B	98	55.682	Loxodonta_africana
ENSCING00000004199	-	78	63.068	ENSMFAG00000031726	EIF4E1B	83	63.068	Macaca_fascicularis
ENSCING00000004199	-	78	63.068	ENSMMUG00000000142	EIF4E1B	74	61.878	Macaca_mulatta
ENSCING00000004199	-	78	63.068	ENSMNEG00000031510	EIF4E1B	74	61.878	Macaca_nemestrina
ENSCING00000004199	-	78	63.068	ENSMLEG00000037281	EIF4E1B	74	61.878	Mandrillus_leucophaeus
ENSCING00000004199	-	81	64.835	ENSMGAG00000004602	EIF4E1B	89	61.340	Meleagris_gallopavo
ENSCING00000004199	-	50	48.214	ENSMAUG00000000789	-	98	48.214	Mesocricetus_auratus
ENSCING00000004199	-	78	53.977	ENSMICG00000047427	EIF4E1B	71	53.977	Microcebus_murinus
ENSCING00000004199	-	50	48.214	ENSMOCG00000020755	-	98	48.214	Microtus_ochrogaster
ENSCING00000004199	-	56	55.906	ENSMODG00000016941	-	99	55.906	Monodelphis_domestica
ENSCING00000004199	-	87	59.184	ENSMODG00000005097	-	89	59.184	Monodelphis_domestica
ENSCING00000004199	-	77	60.694	MGP_CAROLIEiJ_G0018546	Eif4e1b	93	46.789	Mus_caroli
ENSCING00000004199	-	77	60.694	ENSMUSG00000074895	Eif4e1b	96	47.706	Mus_musculus
ENSCING00000004199	-	77	63.584	MGP_PahariEiJ_G0019611	Eif4e1b	100	51.456	Mus_pahari
ENSCING00000004199	-	77	60.694	MGP_SPRETEiJ_G0019426	Eif4e1b	96	47.706	Mus_spretus
ENSCING00000004199	-	80	62.431	ENSMPUG00000012507	EIF4E1B	69	62.431	Mustela_putorius_furo
ENSCING00000004199	-	78	62.500	ENSMLUG00000001437	EIF4E1B	71	62.500	Myotis_lucifugus
ENSCING00000004199	-	50	46.429	ENSNGAG00000012821	-	98	46.429	Nannospalax_galili
ENSCING00000004199	-	80	62.431	ENSNLEG00000012532	EIF4E1B	75	62.431	Nomascus_leucogenys
ENSCING00000004199	-	77	54.335	ENSMEUG00000002671	EIF4E1B	94	54.335	Notamacropus_eugenii
ENSCING00000004199	-	62	63.309	ENSOPRG00000008875	EIF4E1B	93	63.309	Ochotona_princeps
ENSCING00000004199	-	80	59.116	ENSODEG00000009390	EIF4E1B	75	59.116	Octodon_degus
ENSCING00000004199	-	78	63.068	ENSOCUG00000007864	EIF4E1B	82	61.878	Oryctolagus_cuniculus
ENSCING00000004199	-	78	63.636	ENSOGAG00000005844	EIF4E1B	84	63.636	Otolemur_garnettii
ENSCING00000004199	-	80	60.109	ENSOARG00000002979	EIF4E1B	93	53.917	Ovis_aries
ENSCING00000004199	-	78	63.636	ENSPPAG00000036530	EIF4E1B	71	63.636	Pan_paniscus
ENSCING00000004199	-	99	54.709	ENSPPRG00000011119	EIF4E1B	73	61.878	Panthera_pardus
ENSCING00000004199	-	80	61.878	ENSPTIG00000012304	EIF4E1B	94	52.361	Panthera_tigris_altaica
ENSCING00000004199	-	78	63.636	ENSPTRG00000028481	EIF4E1B	73	63.636	Pan_troglodytes
ENSCING00000004199	-	78	62.500	ENSPANG00000014775	EIF4E1B	74	61.326	Papio_anubis
ENSCING00000004199	-	81	59.563	ENSPKIG00000025064	eif4e1b	86	59.563	Paramormyrops_kingsleyae
ENSCING00000004199	-	50	49.107	ENSPEMG00000006338	-	98	49.107	Peromyscus_maniculatus_bairdii
ENSCING00000004199	-	89	57.073	ENSPCIG00000018442	EIF4E1B	80	57.073	Phascolarctos_cinereus
ENSCING00000004199	-	79	60.112	ENSPPYG00000016077	-	82	60.112	Pongo_abelii
ENSCING00000004199	-	50	52.212	ENSPCAG00000003618	-	94	52.212	Procavia_capensis
ENSCING00000004199	-	78	59.659	ENSPCOG00000019904	EIF4E1B	75	59.659	Propithecus_coquereli
ENSCING00000004199	-	76	59.064	ENSPVAG00000017039	EIF4E1B	81	58.286	Pteropus_vampyrus
ENSCING00000004199	-	81	62.637	ENSPNAG00000000195	eif4e1b	85	62.637	Pygocentrus_nattereri
ENSCING00000004199	-	80	61.878	ENSRBIG00000039242	EIF4E1B	83	63.068	Rhinopithecus_bieti
ENSCING00000004199	-	80	61.878	ENSRROG00000042084	EIF4E1B	74	61.878	Rhinopithecus_roxellana
ENSCING00000004199	-	80	62.983	ENSSBOG00000030710	EIF4E1B	76	62.983	Saimiri_boliviensis_boliviensis
ENSCING00000004199	-	86	58.549	ENSSHAG00000007864	EIF4E1B	97	58.549	Sarcophilus_harrisii
ENSCING00000004199	-	79	60.674	ENSSFOG00015005488	eif4e1b	81	60.674	Scleropages_formosus
ENSCING00000004199	-	96	57.407	ENSSPUG00000006304	EIF4E1B	97	64.912	Sphenodon_punctatus
ENSCING00000004199	-	79	61.017	ENSSSCG00000014052	EIF4E1B	74	60.221	Sus_scrofa
ENSCING00000004199	-	74	64.072	ENSTGUG00000000504	EIF4E1B	100	64.072	Taeniopygia_guttata
ENSCING00000004199	-	63	61.972	ENSTBEG00000001631	EIF4E1B	80	61.972	Tupaia_belangeri
ENSCING00000004199	-	78	60.000	ENSTTRG00000014026	EIF4E1B	83	60.000	Tursiops_truncatus
ENSCING00000004199	-	80	61.878	ENSUAMG00000022136	EIF4E1B	98	52.308	Ursus_americanus
ENSCING00000004199	-	81	60.440	ENSVVUG00000001475	EIF4E1B	76	60.440	Vulpes_vulpes