EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000004204 (Gene tree)
Gene ID: 100184616
Gene Symbol: -
Alias: -
Full Name: 39S ribosomal protein L17%2C mitochondrial-like
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 1112 bases
Position: chr12:4220926-4222037
Accession: 100184616
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000008684	Ribosomal_L17	PF01196.19	1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000008684	-	715	XM_002127128	ENSCINP00000008684	166 (aa)	XP_002127164	A0A1W3JF95

Gene Model

Click here to download ENSCING00000004204's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000004204's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000004204	-	98	35.152	ENSG00000158042	MRPL17	94	33.333	Homo_sapiens
ENSCING00000004204	-	90	40.397	ENSAPOG00000014937	mrpl17	90	40.397	Acanthochromis_polyacanthus
ENSCING00000004204	-	92	38.065	ENSAMEG00000016246	MRPL17	88	38.065	Ailuropoda_melanoleuca
ENSCING00000004204	-	90	40.397	ENSACIG00000011247	mrpl17	90	40.397	Amphilophus_citrinellus
ENSCING00000004204	-	50	33.735	ENSACIG00000010456	-	59	33.735	Amphilophus_citrinellus
ENSCING00000004204	-	90	39.073	ENSAOCG00000009243	mrpl17	90	39.073	Amphiprion_ocellaris
ENSCING00000004204	-	90	39.073	ENSAPEG00000009301	mrpl17	90	39.073	Amphiprion_percula
ENSCING00000004204	-	90	43.046	ENSATEG00000018777	mrpl17	90	43.046	Anabas_testudineus
ENSCING00000004204	-	96	37.037	ENSACAG00000009480	MRPL17	92	39.877	Anolis_carolinensis
ENSCING00000004204	-	98	35.152	ENSANAG00000019957	MRPL17	92	35.152	Aotus_nancymaae
ENSCING00000004204	-	90	39.073	ENSACLG00000027400	mrpl17	90	39.073	Astatotilapia_calliptera
ENSCING00000004204	-	90	39.735	ENSAMXG00000015294	mrpl17	85	39.735	Astyanax_mexicanus
ENSCING00000004204	-	93	36.538	ENSBTAG00000024781	MRPL17	89	36.538	Bos_taurus
ENSCING00000004204	-	98	35.366	ENSCJAG00000038483	MRPL17	91	35.366	Callithrix_jacchus
ENSCING00000004204	-	78	38.931	ENSCAFG00000006589	MRPL17	73	38.065	Canis_familiaris
ENSCING00000004204	-	78	38.931	ENSCAFG00020009746	MRPL17	88	38.065	Canis_lupus_dingo
ENSCING00000004204	-	78	37.692	ENSCHIG00000015842	MRPL17	88	36.364	Capra_hircus
ENSCING00000004204	-	78	38.931	ENSTSYG00000027878	MRPL17	84	37.748	Carlito_syrichta
ENSCING00000004204	-	98	37.805	ENSCPOG00000032658	MRPL17	91	37.805	Cavia_porcellus
ENSCING00000004204	-	98	35.152	ENSCCAG00000025049	MRPL17	92	35.152	Cebus_capucinus
ENSCING00000004204	-	98	35.758	ENSCATG00000035650	MRPL17	92	35.758	Cercocebus_atys
ENSCING00000004204	-	80	39.850	ENSCLAG00000015854	MRPL17	85	38.562	Chinchilla_lanigera
ENSCING00000004204	-	98	36.364	ENSCSAG00000004367	MRPL17	87	36.364	Chlorocebus_sabaeus
ENSCING00000004204	-	90	42.763	ENSCPBG00000000499	MRPL17	83	42.763	Chrysemys_picta_bellii
ENSCING00000004204	-	96	86.792	ENSCSAVG00000011072	-	99	86.792	Ciona_savignyi
ENSCING00000004204	-	83	36.957	ENSCANG00000042315	MRPL17	92	34.545	Colobus_angolensis_palliatus
ENSCING00000004204	-	79	39.394	ENSCGRG00000004658	Mrpl17	92	36.364	Cricetulus_griseus_crigri
ENSCING00000004204	-	90	41.060	ENSCSEG00000015170	mrpl17	88	41.060	Cynoglossus_semilaevis
ENSCING00000004204	-	95	39.375	ENSCVAG00000015116	mrpl17	95	39.375	Cyprinodon_variegatus
ENSCING00000004204	-	90	38.411	ENSDARG00000075677	mrpl17	89	38.411	Danio_rerio
ENSCING00000004204	-	91	36.601	ENSDNOG00000047312	-	60	36.601	Dasypus_novemcinctus
ENSCING00000004204	-	79	39.394	ENSDORG00000026555	Mrpl17	91	36.585	Dipodomys_ordii
ENSCING00000004204	-	81	38.235	ENSETEG00000008580	MRPL17	84	37.748	Echinops_telfairi
ENSCING00000004204	-	96	35.185	ENSEBUG00000013244	mrpl17	80	35.185	Eptatretus_burgeri
ENSCING00000004204	-	92	37.419	ENSEASG00005003093	MRPL17	88	37.419	Equus_asinus_asinus
ENSCING00000004204	-	92	37.419	ENSECAG00000010156	MRPL17	88	37.419	Equus_caballus
ENSCING00000004204	-	96	35.404	ENSEEUG00000013026	MRPL17	91	35.404	Erinaceus_europaeus
ENSCING00000004204	-	96	39.877	ENSELUG00000020191	mrpl17	98	39.877	Esox_lucius
ENSCING00000004204	-	92	38.065	ENSFCAG00000036047	MRPL17	76	38.065	Felis_catus
ENSCING00000004204	-	79	37.879	ENSFDAG00000013150	MRPL17	86	36.364	Fukomys_damarensis
ENSCING00000004204	-	90	40.397	ENSFHEG00000006763	mrpl17	90	40.397	Fundulus_heteroclitus
ENSCING00000004204	-	90	41.060	ENSGMOG00000013596	mrpl17	84	41.060	Gadus_morhua
ENSCING00000004204	-	93	43.590	ENSGALG00000002605	MRPL17	94	43.590	Gallus_gallus
ENSCING00000004204	-	96	39.506	ENSGAFG00000010332	mrpl17	95	39.506	Gambusia_affinis
ENSCING00000004204	-	100	39.286	ENSGACG00000003236	mrpl17	94	39.286	Gasterosteus_aculeatus
ENSCING00000004204	-	51	43.529	ENSGAGG00000000396	MRPL17	77	43.529	Gopherus_agassizii
ENSCING00000004204	-	98	35.758	ENSGGOG00000038003	MRPL17	92	35.758	Gorilla_gorilla
ENSCING00000004204	-	90	40.397	ENSHBUG00000017678	mrpl17	90	40.397	Haplochromis_burtoni
ENSCING00000004204	-	92	36.364	ENSHGLG00000006859	MRPL17	86	36.364	Heterocephalus_glaber_female
ENSCING00000004204	-	92	36.364	ENSHGLG00100013588	MRPL17	86	36.364	Heterocephalus_glaber_male
ENSCING00000004204	-	90	43.709	ENSHCOG00000011399	mrpl17	90	43.709	Hippocampus_comes
ENSCING00000004204	-	90	37.086	ENSIPUG00000018383	MRPL17	88	37.086	Ictalurus_punctatus
ENSCING00000004204	-	78	39.231	ENSJJAG00000022535	Mrpl17	84	38.000	Jaculus_jaculus
ENSCING00000004204	-	90	41.060	ENSKMAG00000011240	mrpl17	89	41.060	Kryptolebias_marmoratus
ENSCING00000004204	-	90	41.060	ENSLBEG00000003781	mrpl17	90	41.060	Labrus_bergylta
ENSCING00000004204	-	96	36.420	ENSLACG00000015317	MRPL17	88	36.420	Latimeria_chalumnae
ENSCING00000004204	-	90	39.073	ENSLOCG00000004435	mrpl17	89	39.073	Lepisosteus_oculatus
ENSCING00000004204	-	78	38.931	ENSLAFG00000004834	MRPL17	84	37.748	Loxodonta_africana
ENSCING00000004204	-	98	35.758	ENSMFAG00000005488	MRPL17	92	35.758	Macaca_fascicularis
ENSCING00000004204	-	98	35.758	ENSMMUG00000004544	MRPL17	92	35.758	Macaca_mulatta
ENSCING00000004204	-	98	35.758	ENSMNEG00000031071	MRPL17	92	35.758	Macaca_nemestrina
ENSCING00000004204	-	98	35.758	ENSMLEG00000040344	MRPL17	92	35.758	Mandrillus_leucophaeus
ENSCING00000004204	-	94	41.139	ENSMAMG00000005242	mrpl17	89	41.139	Mastacembelus_armatus
ENSCING00000004204	-	90	40.397	ENSMZEG00005003468	mrpl17	90	40.397	Maylandia_zebra
ENSCING00000004204	-	78	40.000	ENSMAUG00000005494	Mrpl17	85	38.158	Mesocricetus_auratus
ENSCING00000004204	-	78	38.168	ENSMICG00000035814	MRPL17	90	35.625	Microcebus_murinus
ENSCING00000004204	-	80	39.552	ENSMOCG00000018077	Mrpl17	92	37.576	Microtus_ochrogaster
ENSCING00000004204	-	90	39.735	ENSMMOG00000015377	mrpl17	90	39.735	Mola_mola
ENSCING00000004204	-	90	39.735	ENSMODG00000018267	MRPL17	93	39.735	Monodelphis_domestica
ENSCING00000004204	-	90	43.709	ENSMALG00000013904	mrpl17	90	43.709	Monopterus_albus
ENSCING00000004204	-	79	40.152	MGP_CAROLIEiJ_G0030241	Mrpl17	85	38.816	Mus_caroli
ENSCING00000004204	-	79	40.152	ENSMUSG00000030879	Mrpl17	90	36.283	Mus_musculus
ENSCING00000004204	-	79	40.152	MGP_PahariEiJ_G0013456	Mrpl17	85	38.816	Mus_pahari
ENSCING00000004204	-	79	40.152	MGP_SPRETEiJ_G0031353	Mrpl17	85	38.816	Mus_spretus
ENSCING00000004204	-	78	39.695	ENSMPUG00000005449	-	71	38.710	Mustela_putorius_furo
ENSCING00000004204	-	78	38.931	ENSMPUG00000018502	-	88	38.065	Mustela_putorius_furo
ENSCING00000004204	-	92	37.419	ENSMLUG00000001144	MRPL17	88	37.419	Myotis_lucifugus
ENSCING00000004204	-	79	38.636	ENSNGAG00000012128	Mrpl17	92	35.758	Nannospalax_galili
ENSCING00000004204	-	90	40.397	ENSNBRG00000015689	mrpl17	90	40.397	Neolamprologus_brichardi
ENSCING00000004204	-	98	35.152	ENSNLEG00000032707	MRPL17	92	35.152	Nomascus_leucogenys
ENSCING00000004204	-	90	38.158	ENSMEUG00000013588	-	94	38.158	Notamacropus_eugenii
ENSCING00000004204	-	78	39.695	ENSOPRG00000008141	MRPL17	90	36.420	Ochotona_princeps
ENSCING00000004204	-	92	38.961	ENSODEG00000009556	MRPL17	86	38.961	Octodon_degus
ENSCING00000004204	-	90	40.397	ENSONIG00000011427	mrpl17	90	40.397	Oreochromis_niloticus
ENSCING00000004204	-	61	35.294	ENSOANG00000007173	-	77	35.294	Ornithorhynchus_anatinus
ENSCING00000004204	-	73	37.398	ENSOCUG00000005726	MRPL17	86	37.013	Oryctolagus_cuniculus
ENSCING00000004204	-	93	42.500	ENSORLG00000028920	mrpl17	95	42.500	Oryzias_latipes
ENSCING00000004204	-	93	42.500	ENSORLG00020000015	mrpl17	95	42.500	Oryzias_latipes_hni
ENSCING00000004204	-	93	42.500	ENSORLG00015005891	mrpl17	95	42.500	Oryzias_latipes_hsok
ENSCING00000004204	-	89	38.667	ENSOMEG00000019409	mrpl17	89	38.667	Oryzias_melastigma
ENSCING00000004204	-	78	38.168	ENSOGAG00000014856	MRPL17	84	37.086	Otolemur_garnettii
ENSCING00000004204	-	79	37.121	ENSOARG00000016577	MRPL17	89	35.897	Ovis_aries
ENSCING00000004204	-	98	35.152	ENSPPAG00000038749	MRPL17	92	35.152	Pan_paniscus
ENSCING00000004204	-	92	38.065	ENSPPRG00000022075	MRPL17	88	38.065	Panthera_pardus
ENSCING00000004204	-	92	38.065	ENSPTIG00000014738	MRPL17	76	38.065	Panthera_tigris_altaica
ENSCING00000004204	-	98	35.152	ENSPTRG00000044450	MRPL17	92	35.152	Pan_troglodytes
ENSCING00000004204	-	98	35.152	ENSPANG00000025791	MRPL17	92	35.152	Papio_anubis
ENSCING00000004204	-	90	41.060	ENSPKIG00000021330	mrpl17	89	41.060	Paramormyrops_kingsleyae
ENSCING00000004204	-	90	41.722	ENSPMGG00000018670	mrpl17	90	41.722	Periophthalmus_magnuspinnatus
ENSCING00000004204	-	79	38.636	ENSPEMG00000012735	Mrpl17	85	38.158	Peromyscus_maniculatus_bairdii
ENSCING00000004204	-	90	38.158	ENSPCIG00000010796	MRPL17	90	38.158	Phascolarctos_cinereus
ENSCING00000004204	-	96	39.506	ENSPFOG00000003148	mrpl17	95	39.506	Poecilia_formosa
ENSCING00000004204	-	96	39.506	ENSPLAG00000007818	mrpl17	95	39.506	Poecilia_latipinna
ENSCING00000004204	-	96	39.506	ENSPMEG00000011833	mrpl17	95	39.506	Poecilia_mexicana
ENSCING00000004204	-	96	39.506	ENSPREG00000014661	mrpl17	95	39.506	Poecilia_reticulata
ENSCING00000004204	-	98	35.152	ENSPPYG00000003534	MRPL17	92	35.152	Pongo_abelii
ENSCING00000004204	-	79	38.636	ENSPCAG00000018837	-	85	37.500	Procavia_capensis
ENSCING00000004204	-	79	38.636	ENSPCAG00000018799	-	85	37.500	Procavia_capensis
ENSCING00000004204	-	78	38.931	ENSPCOG00000014817	-	91	35.976	Propithecus_coquereli
ENSCING00000004204	-	52	34.483	ENSPCOG00000011215	-	79	31.092	Propithecus_coquereli
ENSCING00000004204	-	78	37.405	ENSPVAG00000006422	MRPL17	88	36.364	Pteropus_vampyrus
ENSCING00000004204	-	90	40.397	ENSPNYG00000015200	mrpl17	90	40.397	Pundamilia_nyererei
ENSCING00000004204	-	90	38.411	ENSPNAG00000026698	mrpl17	89	38.411	Pygocentrus_nattereri
ENSCING00000004204	-	79	39.394	ENSRNOG00000019497	Mrpl17	85	38.158	Rattus_norvegicus
ENSCING00000004204	-	83	36.957	ENSRBIG00000040233	MRPL17	93	35.443	Rhinopithecus_bieti
ENSCING00000004204	-	82	37.226	ENSRROG00000032283	MRPL17	95	34.545	Rhinopithecus_roxellana
ENSCING00000004204	-	98	35.758	ENSSBOG00000031626	MRPL17	92	35.758	Saimiri_boliviensis_boliviensis
ENSCING00000004204	-	81	37.681	ENSSHAG00000010208	MRPL17	90	37.500	Sarcophilus_harrisii
ENSCING00000004204	-	97	41.104	ENSSFOG00015021634	mrpl17	96	41.104	Scleropages_formosus
ENSCING00000004204	-	92	40.260	ENSSMAG00000006719	mrpl17	92	40.260	Scophthalmus_maximus
ENSCING00000004204	-	90	41.722	ENSSDUG00000001234	mrpl17	90	41.722	Seriola_dumerili
ENSCING00000004204	-	90	41.722	ENSSLDG00000000596	mrpl17	90	41.722	Seriola_lalandi_dorsalis
ENSCING00000004204	-	93	41.667	ENSSPUG00000015486	MRPL17	91	41.667	Sphenodon_punctatus
ENSCING00000004204	-	90	39.073	ENSSPAG00000000386	mrpl17	90	39.073	Stegastes_partitus
ENSCING00000004204	-	79	39.394	ENSSSCG00000024693	MRPL17	91	37.821	Sus_scrofa
ENSCING00000004204	-	90	44.737	ENSTGUG00000001893	MRPL17	90	44.737	Taeniopygia_guttata
ENSCING00000004204	-	92	33.158	ENSTRUG00000022925	mrpl17	95	33.158	Takifugu_rubripes
ENSCING00000004204	-	90	38.667	ENSTNIG00000008195	mrpl17	93	38.667	Tetraodon_nigroviridis
ENSCING00000004204	-	79	38.636	ENSTTRG00000004903	MRPL17	89	37.179	Tursiops_truncatus
ENSCING00000004204	-	92	38.065	ENSUAMG00000025644	MRPL17	71	38.065	Ursus_americanus
ENSCING00000004204	-	92	38.065	ENSUMAG00000000411	MRPL17	71	38.065	Ursus_maritimus
ENSCING00000004204	-	79	39.394	ENSVPAG00000008874	MRPL17	91	37.821	Vicugna_pacos
ENSCING00000004204	-	78	39.231	ENSVVUG00000024084	MRPL17	69	38.312	Vulpes_vulpes
ENSCING00000004204	-	88	39.735	ENSXETG00000027295	mrpl17	85	39.735	Xenopus_tropicalis
ENSCING00000004204	-	95	39.375	ENSXCOG00000019115	mrpl17	95	39.375	Xiphophorus_couchianus
ENSCING00000004204	-	90	39.735	ENSXMAG00000006741	mrpl17	90	39.735	Xiphophorus_maculatus