EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCING00000004310 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_intestinalis
Status
putative
Strand
Plus strand
Length
6538 bases
Position
chr1:2110170-2116707
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCINP00000008908tRNA_SADPF07973.141.8e-1211
ENSCINP00000008908HGTP_anticodonPF03129.206.3e-1911
ENSCINP00000008908tRNA-synt_2bPF00587.256.9e-3811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCINT00000008908-2142-ENSCINP00000008908629 (aa)-F6SI05
Gene Model
Click here to download ENSCING00000004310's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000004310's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCING00000004310-9875.649ENSG00000113407TARS8575.649Homo_sapiens
ENSCING00000004310-9072.872ENSAPOG00000021756tarsl210072.872Acanthochromis_polyacanthus
ENSCING00000004310-9875.487ENSAPOG00000013465tars8575.487Acanthochromis_polyacanthus
ENSCING00000004310-8078.968ENSAMEG00000003451TARS7878.968Ailuropoda_melanoleuca
ENSCING00000004310-9872.520ENSACIG00000015719tars10072.748Amphilophus_citrinellus
ENSCING00000004310-9873.052ENSACIG00000005189tarsl28873.052Amphilophus_citrinellus
ENSCING00000004310-9872.078ENSAOCG00000009313tarsl29269.593Amphiprion_ocellaris
ENSCING00000004310-9876.786ENSAOCG00000023847tars8576.786Amphiprion_ocellaris
ENSCING00000004310-9872.078ENSAPEG00000007987tarsl28972.078Amphiprion_percula
ENSCING00000004310-9876.786ENSAPEG00000013710tars8576.786Amphiprion_percula
ENSCING00000004310-9875.812ENSATEG00000023154tars8575.812Anabas_testudineus
ENSCING00000004310-9872.727ENSATEG00000004034tarsl27672.727Anabas_testudineus
ENSCING00000004310-9875.649ENSAPLG00000016069TARS8975.649Anas_platyrhynchos
ENSCING00000004310-9875.000ENSANAG00000020786TARS8575.000Aotus_nancymaae
ENSCING00000004310-9875.974ENSACLG00000018603tars8975.974Astatotilapia_calliptera
ENSCING00000004310-9872.565ENSACLG00000018601tarsl27672.565Astatotilapia_calliptera
ENSCING00000004310-9875.812ENSAMXG00000014068tars8575.812Astyanax_mexicanus
ENSCING00000004310-9873.539ENSAMXG00000020852tarsl27273.539Astyanax_mexicanus
ENSCING00000004310-9875.162ENSBTAG00000014261TARS8575.162Bos_taurus
ENSCING00000004310-9875.487ENSCJAG00000018663TARS8575.487Callithrix_jacchus
ENSCING00000004310-9875.487ENSCAFG00000018858TARS8575.487Canis_familiaris
ENSCING00000004310-9875.487ENSCAFG00020016830TARS8575.487Canis_lupus_dingo
ENSCING00000004310-9875.325ENSCHIG00000013566TARS8875.325Capra_hircus
ENSCING00000004310-9875.812ENSTSYG00000010851TARS8575.812Carlito_syrichta
ENSCING00000004310-9461.513ENSCAPG00000011392TARS9161.513Cavia_aperea
ENSCING00000004310-9875.162ENSCPOG00000014012TARS8275.162Cavia_porcellus
ENSCING00000004310-9875.162ENSCCAG00000019805TARS8575.162Cebus_capucinus
ENSCING00000004310-9875.487ENSCATG00000038037TARS8575.487Cercocebus_atys
ENSCING00000004310-9875.812ENSCLAG00000008983TARS8575.812Chinchilla_lanigera
ENSCING00000004310-9875.000ENSCSAG00000017162TARS8575.000Chlorocebus_sabaeus
ENSCING00000004310-9875.407ENSCHOG00000013155-10075.407Choloepus_hoffmanni
ENSCING00000004310-7382.051ENSCHOG00000005325-7082.051Choloepus_hoffmanni
ENSCING00000004310-9875.162ENSCPBG00000013172TARS8975.162Chrysemys_picta_bellii
ENSCING00000004310-9863.902ENSCPBG00000008240-8863.902Chrysemys_picta_bellii
ENSCING00000004310-9875.325ENSCANG00000031774TARS8575.325Colobus_angolensis_palliatus
ENSCING00000004310-9875.974ENSCGRG00001022888Tars8875.974Cricetulus_griseus_chok1gshd
ENSCING00000004310-9875.974ENSCGRG00000000978Tars8875.974Cricetulus_griseus_crigri
ENSCING00000004310-9872.240ENSCSEG00000011120tarsl28072.240Cynoglossus_semilaevis
ENSCING00000004310-9875.812ENSCSEG00000007462tars8575.812Cynoglossus_semilaevis
ENSCING00000004310-9876.461ENSCVAG00000012329tars8972.890Cyprinodon_variegatus
ENSCING00000004310-9872.890ENSCVAG00000009572tarsl27772.890Cyprinodon_variegatus
ENSCING00000004310-6972.748ENSDARG00000092774tarsl210072.748Danio_rerio
ENSCING00000004310-9875.487ENSDARG00000013250tars8675.487Danio_rerio
ENSCING00000004310-9874.351ENSDNOG00000017275TARS8574.351Dasypus_novemcinctus
ENSCING00000004310-9876.136ENSDORG00000008801Tars9076.136Dipodomys_ordii
ENSCING00000004310-9673.877ENSETEG00000006292TARS8573.877Echinops_telfairi
ENSCING00000004310-9875.487ENSEBUG00000010935tarsl28675.487Eptatretus_burgeri
ENSCING00000004310-9875.649ENSEASG00005015075TARS9375.649Equus_asinus_asinus
ENSCING00000004310-9875.974ENSECAG00000020854TARS8575.974Equus_caballus
ENSCING00000004310-9866.721ENSEEUG00000005701TARS8566.721Erinaceus_europaeus
ENSCING00000004310-9873.214ENSELUG00000011403tars8772.981Esox_lucius
ENSCING00000004310-9872.727ENSELUG00000007414tarsl29271.870Esox_lucius
ENSCING00000004310-9875.487ENSFCAG00000002351TARS8575.487Felis_catus
ENSCING00000004310-9875.487ENSFALG00000002131TARS8575.487Ficedula_albicollis
ENSCING00000004310-9875.000ENSFDAG00000005928TARS9275.000Fukomys_damarensis
ENSCING00000004310-9876.136ENSFHEG00000004551tars8576.136Fundulus_heteroclitus
ENSCING00000004310-9872.727ENSFHEG00000010406tarsl29269.318Fundulus_heteroclitus
ENSCING00000004310-9864.821ENSGMOG00000013046tars9164.821Gadus_morhua
ENSCING00000004310-9565.327ENSGMOG00000002140tarsl28665.327Gadus_morhua
ENSCING00000004310-9875.649ENSGALG00000003288TARS7875.649Gallus_gallus
ENSCING00000004310-9870.921ENSGAFG00000017077tars9270.921Gambusia_affinis
ENSCING00000004310-9473.906ENSGAFG00000009417tarsl27273.906Gambusia_affinis
ENSCING00000004310-9875.812ENSGACG00000004921tars8675.812Gasterosteus_aculeatus
ENSCING00000004310-9871.870ENSGACG00000014631tarsl28871.870Gasterosteus_aculeatus
ENSCING00000004310-9874.838ENSGAGG00000019945TARS8774.838Gopherus_agassizii
ENSCING00000004310-9863.577ENSGAGG00000001743-8863.577Gopherus_agassizii
ENSCING00000004310-9875.487ENSGGOG00000014336TARS8875.487Gorilla_gorilla
ENSCING00000004310-9875.974ENSHBUG00000011236tars8575.974Haplochromis_burtoni
ENSCING00000004310-9873.052ENSHBUG00000020986tarsl27673.052Haplochromis_burtoni
ENSCING00000004310-9876.136ENSHGLG00000004347TARS8576.136Heterocephalus_glaber_female
ENSCING00000004310-9661.296ENSHGLG00100009436-8661.296Heterocephalus_glaber_male
ENSCING00000004310-9876.136ENSHGLG00100016510-8576.136Heterocephalus_glaber_male
ENSCING00000004310-8278.827ENSHCOG00000019262tars8478.827Hippocampus_comes
ENSCING00000004310-9872.727ENSHCOG00000001263tarsl210071.824Hippocampus_comes
ENSCING00000004310-9873.821ENSIPUG00000010218tarsl27573.821Ictalurus_punctatus
ENSCING00000004310-9875.162ENSIPUG00000012104tars8575.162Ictalurus_punctatus
ENSCING00000004310-9875.974ENSSTOG00000000811TARS9075.974Ictidomys_tridecemlineatus
ENSCING00000004310-9875.325ENSJJAG00000012711Tars8875.325Jaculus_jaculus
ENSCING00000004310-9872.078ENSKMAG00000001740tarsl29172.078Kryptolebias_marmoratus
ENSCING00000004310-9875.487ENSKMAG00000006120tars8575.487Kryptolebias_marmoratus
ENSCING00000004310-9875.487ENSLBEG00000014334tars8575.487Labrus_bergylta
ENSCING00000004310-9867.967ENSLBEG00000018238-9267.967Labrus_bergylta
ENSCING00000004310-9872.565ENSLBEG00000018541tarsl29270.130Labrus_bergylta
ENSCING00000004310-9852.751ENSLACG00000008719-8452.589Latimeria_chalumnae
ENSCING00000004310-9875.325ENSLACG00000018690-7875.325Latimeria_chalumnae
ENSCING00000004310-9876.461ENSLACG00000009316TARS8576.461Latimeria_chalumnae
ENSCING00000004310-7669.182ENSLOCG00000014607tarsl26267.396Lepisosteus_oculatus
ENSCING00000004310-9875.812ENSLOCG00000011402tars8575.812Lepisosteus_oculatus
ENSCING00000004310-9876.136ENSLAFG00000009855TARS8576.136Loxodonta_africana
ENSCING00000004310-9875.487ENSMFAG00000043658TARS8575.487Macaca_fascicularis
ENSCING00000004310-9875.487ENSMMUG00000016224TARS8875.487Macaca_mulatta
ENSCING00000004310-9875.487ENSMNEG00000035174TARS8575.487Macaca_nemestrina
ENSCING00000004310-9871.704ENSMLEG00000037573TARS10071.404Mandrillus_leucophaeus
ENSCING00000004310-9872.890ENSMAMG00000005294tarsl27572.890Mastacembelus_armatus
ENSCING00000004310-9875.162ENSMAMG00000007405tars8575.162Mastacembelus_armatus
ENSCING00000004310-9872.727ENSMZEG00005005731tarsl27672.727Maylandia_zebra
ENSCING00000004310-9875.974ENSMZEG00005012967tars8575.974Maylandia_zebra
ENSCING00000004310-9841.335ENSMGAG00000002934-8741.335Meleagris_gallopavo
ENSCING00000004310-9875.162ENSMICG00000005593TARS10075.177Microcebus_murinus
ENSCING00000004310-9875.325ENSMOCG00000002397Tars8973.997Microtus_ochrogaster
ENSCING00000004310-9073.050ENSMMOG00000016276tarsl210073.050Mola_mola
ENSCING00000004310-9876.461ENSMMOG00000017581tars9376.461Mola_mola
ENSCING00000004310-9875.649ENSMODG00000020405TARS8575.649Monodelphis_domestica
ENSCING00000004310-9875.974ENSMALG00000001448tars8575.974Monopterus_albus
ENSCING00000004310-9872.890ENSMALG00000014473tarsl27172.890Monopterus_albus
ENSCING00000004310-9875.812MGP_CAROLIEiJ_G0019674Tars8575.812Mus_caroli
ENSCING00000004310-9875.812ENSMUSG00000022241Tars8575.812Mus_musculus
ENSCING00000004310-9875.812MGP_PahariEiJ_G0016054Tars8575.812Mus_pahari
ENSCING00000004310-9875.649MGP_SPRETEiJ_G0020571Tars8575.649Mus_spretus
ENSCING00000004310-9875.487ENSMPUG00000015177TARS8575.487Mustela_putorius_furo
ENSCING00000004310-9874.838ENSMLUG00000011189TARS8574.838Myotis_lucifugus
ENSCING00000004310-9875.325ENSNGAG00000021115Tars8975.325Nannospalax_galili
ENSCING00000004310-9875.974ENSNBRG00000022198tars8575.974Neolamprologus_brichardi
ENSCING00000004310-9875.487ENSNLEG00000014187TARS9275.487Nomascus_leucogenys
ENSCING00000004310-9271.256ENSMEUG00000011216-9071.256Notamacropus_eugenii
ENSCING00000004310-9066.372ENSMEUG00000002186-9966.372Notamacropus_eugenii
ENSCING00000004310-9869.968ENSOPRG00000003544TARS8569.968Ochotona_princeps
ENSCING00000004310-8873.741ENSODEG00000002089-8277.308Octodon_degus
ENSCING00000004310-9873.539ENSODEG00000011907-9673.539Octodon_degus
ENSCING00000004310-9875.606ENSONIG00000016982tars8575.606Oreochromis_niloticus
ENSCING00000004310-9872.890ENSONIG00000002904tarsl27872.890Oreochromis_niloticus
ENSCING00000004310-9875.649ENSOANG00000014432TARS8675.649Ornithorhynchus_anatinus
ENSCING00000004310-9875.812ENSOCUG00000000684TARS8575.812Oryctolagus_cuniculus
ENSCING00000004310-9876.948ENSORLG00000001603tars8576.948Oryzias_latipes
ENSCING00000004310-9871.916ENSORLG00000014313tarsl27971.916Oryzias_latipes
ENSCING00000004310-9876.948ENSORLG00020008243tars8576.948Oryzias_latipes_hni
ENSCING00000004310-9871.753ENSORLG00020019614tarsl29269.318Oryzias_latipes_hni
ENSCING00000004310-9876.623ENSORLG00015000487tars8576.623Oryzias_latipes_hsok
ENSCING00000004310-9872.078ENSORLG00015017865tarsl28072.078Oryzias_latipes_hsok
ENSCING00000004310-9876.623ENSOMEG00000013835tars8576.623Oryzias_melastigma
ENSCING00000004310-9872.565ENSOMEG00000017135tarsl27672.565Oryzias_melastigma
ENSCING00000004310-9875.649ENSOGAG00000009129TARS8575.649Otolemur_garnettii
ENSCING00000004310-9875.487ENSOARG00000012085TARS8575.487Ovis_aries
ENSCING00000004310-9875.649ENSPPAG00000021251TARS8575.649Pan_paniscus
ENSCING00000004310-9875.487ENSPPRG00000009764TARS8575.487Panthera_pardus
ENSCING00000004310-9875.325ENSPTIG00000020328TARS8575.325Panthera_tigris_altaica
ENSCING00000004310-9875.487ENSPTRG00000016775TARS8575.487Pan_troglodytes
ENSCING00000004310-9875.487ENSPANG00000011000TARS8575.487Papio_anubis
ENSCING00000004310-9872.403ENSPKIG00000020010tarsl27672.403Paramormyrops_kingsleyae
ENSCING00000004310-9875.974ENSPKIG00000010725tars9275.974Paramormyrops_kingsleyae
ENSCING00000004310-9862.704ENSPSIG00000015501-9462.704Pelodiscus_sinensis
ENSCING00000004310-9875.649ENSPSIG00000015697TARS6875.649Pelodiscus_sinensis
ENSCING00000004310-9073.759ENSPMGG00000006955tarsl210073.759Periophthalmus_magnuspinnatus
ENSCING00000004310-9876.786ENSPMGG00000012642tars9276.786Periophthalmus_magnuspinnatus
ENSCING00000004310-9875.974ENSPEMG00000024237Tars8973.760Peromyscus_maniculatus_bairdii
ENSCING00000004310-9875.000ENSPMAG00000004957tarsl27575.000Petromyzon_marinus
ENSCING00000004310-9874.513ENSPCIG00000016353TARS9474.513Phascolarctos_cinereus
ENSCING00000004310-9872.890ENSPFOG00000013908tarsl27672.890Poecilia_formosa
ENSCING00000004310-9875.974ENSPFOG00000010429tars8575.974Poecilia_formosa
ENSCING00000004310-9875.974ENSPLAG00000008773tars9375.974Poecilia_latipinna
ENSCING00000004310-9872.890ENSPLAG00000011183tarsl27872.890Poecilia_latipinna
ENSCING00000004310-9872.727ENSPMEG00000011154tarsl27672.727Poecilia_mexicana
ENSCING00000004310-9875.974ENSPMEG00000016101tars8575.974Poecilia_mexicana
ENSCING00000004310-9869.378ENSPREG00000008101tarsl29369.378Poecilia_reticulata
ENSCING00000004310-9875.974ENSPREG00000008856tars8575.974Poecilia_reticulata
ENSCING00000004310-9875.649ENSPPYG00000015382TARS9975.649Pongo_abelii
ENSCING00000004310-7174.419ENSPCAG00000006885TARS7074.419Procavia_capensis
ENSCING00000004310-8864.875ENSPCOG00000019044TARS8165.942Propithecus_coquereli
ENSCING00000004310-9875.325ENSPVAG00000008939TARS8575.325Pteropus_vampyrus
ENSCING00000004310-9875.974ENSPNYG00000003864tars8575.974Pundamilia_nyererei
ENSCING00000004310-9869.805ENSPNYG00000009768tarsl29269.805Pundamilia_nyererei
ENSCING00000004310-9873.864ENSPNAG00000015361tarsl27573.864Pygocentrus_nattereri
ENSCING00000004310-9875.325ENSPNAG00000014293tars8575.325Pygocentrus_nattereri
ENSCING00000004310-9875.974ENSRNOG00000019023Tars8875.974Rattus_norvegicus
ENSCING00000004310-9875.162ENSRBIG00000009935TARS8575.162Rhinopithecus_bieti
ENSCING00000004310-9875.162ENSRROG00000030698TARS8575.162Rhinopithecus_roxellana
ENSCING00000004310-9875.162ENSSBOG00000021854TARS8575.162Saimiri_boliviensis_boliviensis
ENSCING00000004310-5879.178ENSSHAG00000011084TARS8579.178Sarcophilus_harrisii
ENSCING00000004310-9876.136ENSSFOG00015015118tars8576.136Scleropages_formosus
ENSCING00000004310-9372.821ENSSFOG00015017057tarsl27672.821Scleropages_formosus
ENSCING00000004310-9875.487ENSSMAG00000009718tars8575.487Scophthalmus_maximus
ENSCING00000004310-9872.240ENSSMAG00000009984tarsl27572.240Scophthalmus_maximus
ENSCING00000004310-9872.890ENSSDUG00000007476tarsl27672.890Seriola_dumerili
ENSCING00000004310-9876.299ENSSDUG00000014184tars8974.188Seriola_dumerili
ENSCING00000004310-9872.890ENSSLDG00000016574tarsl27672.890Seriola_lalandi_dorsalis
ENSCING00000004310-9876.299ENSSLDG00000020363tars8576.299Seriola_lalandi_dorsalis
ENSCING00000004310-8467.803ENSSARG00000009829TARS8367.803Sorex_araneus
ENSCING00000004310-9852.683ENSSPUG00000000604-9463.855Sphenodon_punctatus
ENSCING00000004310-9874.838ENSSPUG00000016844TARS9074.838Sphenodon_punctatus
ENSCING00000004310-9872.727ENSSPAG00000020448tarsl27672.727Stegastes_partitus
ENSCING00000004310-9077.249ENSSPAG00000019655tars8175.815Stegastes_partitus
ENSCING00000004310-9875.487ENSSSCG00000016817TARS9375.487Sus_scrofa
ENSCING00000004310-9875.325ENSTGUG00000001925TARS8775.325Taeniopygia_guttata
ENSCING00000004310-9876.136ENSTRUG00000002380tars8576.136Takifugu_rubripes
ENSCING00000004310-6970.023ENSTRUG00000003405tarsl210070.023Takifugu_rubripes
ENSCING00000004310-9876.537ENSTNIG00000015959tars8676.537Tetraodon_nigroviridis
ENSCING00000004310-9868.558ENSTNIG00000011928tarsl27768.558Tetraodon_nigroviridis
ENSCING00000004310-7679.670ENSTBEG00000002740TARS6679.670Tupaia_belangeri
ENSCING00000004310-9873.214ENSTTRG00000005996TARS8773.214Tursiops_truncatus
ENSCING00000004310-9875.162ENSUAMG00000027966TARS8575.162Ursus_americanus
ENSCING00000004310-9875.325ENSUMAG00000013743TARS8575.325Ursus_maritimus
ENSCING00000004310-9171.254ENSVPAG00000010118TARS8771.254Vicugna_pacos
ENSCING00000004310-9875.487ENSVVUG00000022139TARS7775.487Vulpes_vulpes
ENSCING00000004310-9876.136ENSXETG00000009868tars8576.136Xenopus_tropicalis
ENSCING00000004310-9873.214ENSXETG00000020313tarsl27673.214Xenopus_tropicalis
ENSCING00000004310-9859.289ENSXETG00000018640-9159.289Xenopus_tropicalis
ENSCING00000004310-9869.968ENSXCOG00000012648tarsl29069.968Xiphophorus_couchianus
ENSCING00000004310-9875.649ENSXCOG00000009480tars9375.649Xiphophorus_couchianus
ENSCING00000004310-9875.812ENSXMAG00000002878tars8575.812Xiphophorus_maculatus
ENSCING00000004310-9873.214ENSXMAG00000016645tarsl29269.968Xiphophorus_maculatus

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