EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000004359 (Gene tree)
Gene ID: 100169906
Gene Symbol: zf(c2h2)-145
Alias: Ci-ZF(C2H2)-145
Full Name: zinc finger protein (C2H2)-145
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 810 bases
Position: chr2:6341780-6342589
Accession: 100169906
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000009018	zf-C2H2	PF00096.26	2e-27	1	6
ENSCINP00000009018	zf-C2H2	PF00096.26	2e-27	2	6
ENSCINP00000009018	zf-C2H2	PF00096.26	2e-27	3	6
ENSCINP00000009018	zf-C2H2	PF00096.26	2e-27	4	6
ENSCINP00000009018	zf-C2H2	PF00096.26	2e-27	5	6
ENSCINP00000009018	zf-C2H2	PF00096.26	2e-27	6	6
ENSCINP00000009018	zf-met	PF12874.7	9.5e-09	1	2
ENSCINP00000009018	zf-met	PF12874.7	9.5e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000009018	-	810	-	ENSCINP00000009018	269 (aa)	-	Q1RL62

Gene Model

Click here to download ENSCING00000004359's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000004359's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000004359	zf(c2h2)-145	95	33.846	ENSCING00000023719	zf(c2h2)-82	90	33.846	Ciona_intestinalis
ENSCING00000004359	zf(c2h2)-145	95	31.953	FBgn0285971	prg	56	31.953	Drosophila_melanogaster
ENSCING00000004359	zf(c2h2)-145	88	31.696	FBgn0030010	CG10959	52	31.696	Drosophila_melanogaster
ENSCING00000004359	zf(c2h2)-145	90	40.777	ENSHBUG00000004077	-	96	40.777	Haplochromis_burtoni
ENSCING00000004359	zf(c2h2)-145	96	39.394	ENSKMAG00000008319	-	71	39.394	Kryptolebias_marmoratus
ENSCING00000004359	zf(c2h2)-145	87	31.197	ENSMAMG00000023490	-	56	31.197	Mastacembelus_armatus
ENSCING00000004359	zf(c2h2)-145	78	37.288	ENSPMGG00000015225	-	63	37.640	Periophthalmus_magnuspinnatus
ENSCING00000004359	zf(c2h2)-145	74	39.623	ENSPMEG00000014769	-	51	39.623	Poecilia_mexicana
ENSCING00000004359	zf(c2h2)-145	96	39.535	ENSSDUG00000008329	-	68	40.000	Seriola_dumerili