EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000004364 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 11076 bases
Position: chr2:6328060-6339135
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000009024	RRM_1	PF00076.22	1.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000009024	-	2488	-	ENSCINP00000009024	654 (aa)	-	F6S5I8

Gene Model

Click here to download ENSCING00000004364's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000004364's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000004364	-	93	42.365	ENSG00000080802	CNOT4	66	69.323	Homo_sapiens
ENSCING00000004364	-	93	41.667	ENSAPLG00000016441	CNOT4	60	72.269	Anas_platyrhynchos
ENSCING00000004364	-	93	41.704	ENSANAG00000032156	CNOT4	80	69.323	Aotus_nancymaae
ENSCING00000004364	-	61	68.699	ENSACLG00000002514	cnot4a	62	68.699	Astatotilapia_calliptera
ENSCING00000004364	-	55	71.008	ENSAMXG00000011473	cnot4b	53	71.008	Astyanax_mexicanus
ENSCING00000004364	-	93	42.365	ENSBTAG00000017919	CNOT4	66	69.323	Bos_taurus
ENSCING00000004364	-	93	41.704	ENSCJAG00000012532	CNOT4	78	69.323	Callithrix_jacchus
ENSCING00000004364	-	89	42.523	ENSCAFG00000003223	CNOT4	64	69.323	Canis_familiaris
ENSCING00000004364	-	75	47.658	ENSCAFG00020000093	CNOT4	52	69.323	Canis_lupus_dingo
ENSCING00000004364	-	93	42.365	ENSCHIG00000010955	CNOT4	68	69.323	Capra_hircus
ENSCING00000004364	-	93	41.829	ENSTSYG00000000893	CNOT4	66	69.323	Carlito_syrichta
ENSCING00000004364	-	66	69.323	ENSCAPG00000006213	CNOT4	66	69.323	Cavia_aperea
ENSCING00000004364	-	66	69.323	ENSCPOG00000011526	CNOT4	66	69.323	Cavia_porcellus
ENSCING00000004364	-	93	42.239	ENSCCAG00000024414	CNOT4	91	73.756	Cebus_capucinus
ENSCING00000004364	-	93	42.365	ENSCATG00000022607	CNOT4	78	69.323	Cercocebus_atys
ENSCING00000004364	-	66	69.323	ENSCLAG00000001857	CNOT4	66	69.323	Chinchilla_lanigera
ENSCING00000004364	-	93	41.829	ENSCSAG00000009096	CNOT4	66	69.323	Chlorocebus_sabaeus
ENSCING00000004364	-	93	42.365	ENSCANG00000029319	CNOT4	78	69.323	Colobus_angolensis_palliatus
ENSCING00000004364	-	93	41.141	ENSCGRG00001014651	Cnot4	66	69.323	Cricetulus_griseus_chok1gshd
ENSCING00000004364	-	93	41.141	ENSCGRG00000005727	Cnot4	66	69.323	Cricetulus_griseus_crigri
ENSCING00000004364	-	61	68.699	ENSCSEG00000015080	cnot4a	58	67.460	Cynoglossus_semilaevis
ENSCING00000004364	-	66	68.699	ENSCVAG00000009399	cnot4a	61	68.699	Cyprinodon_variegatus
ENSCING00000004364	-	93	42.066	ENSDORG00000012268	Cnot4	66	69.323	Dipodomys_ordii
ENSCING00000004364	-	66	69.323	ENSEASG00005014430	CNOT4	63	69.323	Equus_asinus_asinus
ENSCING00000004364	-	89	42.523	ENSFCAG00000011904	CNOT4	64	69.323	Felis_catus
ENSCING00000004364	-	93	41.829	ENSFDAG00000013525	CNOT4	66	69.323	Fukomys_damarensis
ENSCING00000004364	-	61	68.699	ENSFHEG00000006608	cnot4a	62	68.699	Fundulus_heteroclitus
ENSCING00000004364	-	74	47.695	ENSGMOG00000001329	cnot4a	62	47.590	Gadus_morhua
ENSCING00000004364	-	61	68.293	ENSGACG00000004276	cnot4a	62	68.293	Gasterosteus_aculeatus
ENSCING00000004364	-	89	37.792	ENSGGOG00000000142	CNOT4	64	64.390	Gorilla_gorilla
ENSCING00000004364	-	61	68.699	ENSHBUG00000000027	cnot4a	62	68.699	Haplochromis_burtoni
ENSCING00000004364	-	93	41.829	ENSHGLG00000011533	CNOT4	66	69.323	Heterocephalus_glaber_female
ENSCING00000004364	-	66	68.293	ENSHCOG00000015815	cnot4a	67	68.293	Hippocampus_comes
ENSCING00000004364	-	66	69.323	ENSSTOG00000007717	CNOT4	66	69.323	Ictidomys_tridecemlineatus
ENSCING00000004364	-	93	41.829	ENSJJAG00000016618	Cnot4	66	69.323	Jaculus_jaculus
ENSCING00000004364	-	54	68.699	ENSKMAG00000004581	cnot4a	53	68.699	Kryptolebias_marmoratus
ENSCING00000004364	-	61	68.699	ENSLBEG00000009999	cnot4a	56	68.699	Labrus_bergylta
ENSCING00000004364	-	93	41.829	ENSMFAG00000046349	CNOT4	78	69.323	Macaca_fascicularis
ENSCING00000004364	-	93	42.365	ENSMMUG00000016181	CNOT4	78	69.323	Macaca_mulatta
ENSCING00000004364	-	93	42.365	ENSMNEG00000042164	CNOT4	78	69.323	Macaca_nemestrina
ENSCING00000004364	-	93	42.365	ENSMLEG00000032709	CNOT4	78	69.323	Mandrillus_leucophaeus
ENSCING00000004364	-	61	68.699	ENSMAMG00000023194	cnot4a	62	68.699	Mastacembelus_armatus
ENSCING00000004364	-	61	62.602	ENSMZEG00005007312	cnot4a	61	62.602	Maylandia_zebra
ENSCING00000004364	-	89	42.768	ENSMAUG00000020415	Cnot4	66	69.323	Mesocricetus_auratus
ENSCING00000004364	-	93	42.365	ENSMICG00000001667	CNOT4	66	69.323	Microcebus_murinus
ENSCING00000004364	-	92	41.150	ENSMOCG00000020955	Cnot4	66	69.323	Microtus_ochrogaster
ENSCING00000004364	-	54	69.106	ENSMMOG00000014565	cnot4a	55	69.106	Mola_mola
ENSCING00000004364	-	66	69.323	ENSMODG00000014068	CNOT4	66	69.323	Monodelphis_domestica
ENSCING00000004364	-	61	68.699	ENSMALG00000011662	cnot4a	54	69.262	Monopterus_albus
ENSCING00000004364	-	93	41.168	MGP_CAROLIEiJ_G0028217	Cnot4	66	69.323	Mus_caroli
ENSCING00000004364	-	93	41.291	ENSMUSG00000038784	Cnot4	66	69.323	Mus_musculus
ENSCING00000004364	-	93	41.291	MGP_PahariEiJ_G0021974	Cnot4	66	69.323	Mus_pahari
ENSCING00000004364	-	93	41.291	MGP_SPRETEiJ_G0029216	Cnot4	66	69.323	Mus_spretus
ENSCING00000004364	-	89	42.523	ENSMPUG00000004089	CNOT4	64	69.323	Mustela_putorius_furo
ENSCING00000004364	-	93	41.829	ENSNGAG00000015030	Cnot4	66	69.323	Nannospalax_galili
ENSCING00000004364	-	56	62.602	ENSNBRG00000021144	cnot4a	54	62.602	Neolamprologus_brichardi
ENSCING00000004364	-	93	42.216	ENSNLEG00000013352	CNOT4	78	68.127	Nomascus_leucogenys
ENSCING00000004364	-	64	56.054	ENSOPRG00000001023	CNOT4	61	56.054	Ochotona_princeps
ENSCING00000004364	-	66	69.323	ENSODEG00000012975	CNOT4	66	69.323	Octodon_degus
ENSCING00000004364	-	61	72.269	ENSOANG00000005006	CNOT4	65	72.269	Ornithorhynchus_anatinus
ENSCING00000004364	-	66	69.323	ENSOCUG00000013448	CNOT4	66	69.323	Oryctolagus_cuniculus
ENSCING00000004364	-	54	69.106	ENSORLG00000003727	cnot4a	52	69.106	Oryzias_latipes
ENSCING00000004364	-	54	69.106	ENSORLG00020015684	cnot4a	51	69.106	Oryzias_latipes_hni
ENSCING00000004364	-	54	69.106	ENSORLG00015008470	cnot4a	52	69.106	Oryzias_latipes_hsok
ENSCING00000004364	-	93	42.365	ENSOARG00000008803	CNOT4	68	69.323	Ovis_aries
ENSCING00000004364	-	89	43.079	ENSPPAG00000041937	CNOT4	78	69.323	Pan_paniscus
ENSCING00000004364	-	89	42.523	ENSPTIG00000016601	CNOT4	64	69.323	Panthera_tigris_altaica
ENSCING00000004364	-	89	43.079	ENSPTRG00000019727	CNOT4	78	69.323	Pan_troglodytes
ENSCING00000004364	-	93	42.365	ENSPANG00000017724	CNOT4	78	69.323	Papio_anubis
ENSCING00000004364	-	54	70.124	ENSPMGG00000005671	cnot4a	50	70.124	Periophthalmus_magnuspinnatus
ENSCING00000004364	-	93	41.141	ENSPEMG00000021566	Cnot4	66	69.323	Peromyscus_maniculatus_bairdii
ENSCING00000004364	-	66	69.323	ENSPCIG00000029622	CNOT4	63	69.323	Phascolarctos_cinereus
ENSCING00000004364	-	52	68.699	ENSPLAG00000001780	cnot4a	52	68.699	Poecilia_latipinna
ENSCING00000004364	-	52	68.699	ENSPMEG00000006852	cnot4a	52	68.699	Poecilia_mexicana
ENSCING00000004364	-	52	67.480	ENSPREG00000008171	cnot4a	67	67.480	Poecilia_reticulata
ENSCING00000004364	-	93	41.829	ENSPPYG00000018026	CNOT4	66	69.323	Pongo_abelii
ENSCING00000004364	-	93	41.916	ENSPCOG00000019907	CNOT4	66	69.323	Propithecus_coquereli
ENSCING00000004364	-	93	42.216	ENSPVAG00000004905	CNOT4	64	69.323	Pteropus_vampyrus
ENSCING00000004364	-	56	62.602	ENSPNYG00000004276	cnot4a	54	62.602	Pundamilia_nyererei
ENSCING00000004364	-	60	70.588	ENSPNAG00000020433	cnot4a	60	70.588	Pygocentrus_nattereri
ENSCING00000004364	-	55	71.429	ENSPNAG00000008679	cnot4b	53	71.429	Pygocentrus_nattereri
ENSCING00000004364	-	93	41.467	ENSRNOG00000010795	Cnot4	66	69.323	Rattus_norvegicus
ENSCING00000004364	-	93	42.365	ENSRBIG00000043977	CNOT4	78	69.323	Rhinopithecus_bieti
ENSCING00000004364	-	93	41.940	ENSSBOG00000020808	CNOT4	78	69.323	Saimiri_boliviensis_boliviensis
ENSCING00000004364	-	66	69.323	ENSSHAG00000013639	CNOT4	66	69.323	Sarcophilus_harrisii
ENSCING00000004364	-	66	70.325	ENSSFOG00015002019	cnot4a	61	70.325	Scleropages_formosus
ENSCING00000004364	-	61	68.699	ENSSDUG00000022635	cnot4a	62	68.699	Seriola_dumerili
ENSCING00000004364	-	61	68.699	ENSSLDG00000015770	cnot4a	57	68.699	Seriola_lalandi_dorsalis
ENSCING00000004364	-	56	68.699	ENSSPAG00000012329	cnot4a	55	68.699	Stegastes_partitus
ENSCING00000004364	-	93	42.515	ENSSSCG00000021354	CNOT4	66	69.323	Sus_scrofa
ENSCING00000004364	-	93	41.667	ENSTGUG00000009161	CNOT4	60	72.269	Taeniopygia_guttata
ENSCING00000004364	-	56	69.106	ENSTRUG00000016861	cnot4a	55	69.106	Takifugu_rubripes
ENSCING00000004364	-	59	67.949	ENSTNIG00000016000	cnot4a	60	67.949	Tetraodon_nigroviridis
ENSCING00000004364	-	65	66.932	ENSTBEG00000002202	CNOT4	60	68.526	Tupaia_belangeri
ENSCING00000004364	-	89	42.857	ENSTTRG00000005122	CNOT4	61	69.323	Tursiops_truncatus
ENSCING00000004364	-	60	68.699	ENSXCOG00000020824	cnot4a	57	68.699	Xiphophorus_couchianus
ENSCING00000004364	-	66	68.699	ENSXMAG00000016984	cnot4a	66	68.699	Xiphophorus_maculatus