EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000004394 (Gene tree)
Gene ID: 100187432
Gene Symbol: -
Alias: -
Full Name: 39S ribosomal protein L11%2C mitochondrial-like
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 2896 bases
Position: chr3:4208386-4211281
Accession: 100187432
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000009079	Ribosomal_L11	PF00298.19	7.4e-17	1	1
ENSCINP00000009079	Ribosomal_L11_N	PF03946.14	9.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000009079	-	1392	-	ENSCINP00000009079	196 (aa)	XP_002129028	F7AUH4

Gene Model

Click here to download ENSCING00000004394's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000004394's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000004394	-	95	39.894	ENSG00000174547	MRPL11	96	50.000	Homo_sapiens
ENSCING00000004394	-	88	40.571	ENSAPOG00000005713	mrpl11	89	40.571	Acanthochromis_polyacanthus
ENSCING00000004394	-	93	40.761	ENSAMEG00000011350	MRPL11	96	40.957	Ailuropoda_melanoleuca
ENSCING00000004394	-	79	39.744	ENSACIG00000010480	mrpl11	81	39.744	Amphilophus_citrinellus
ENSCING00000004394	-	88	40.230	ENSAOCG00000007308	mrpl11	100	38.660	Amphiprion_ocellaris
ENSCING00000004394	-	88	40.230	ENSAPEG00000008704	mrpl11	100	38.660	Amphiprion_percula
ENSCING00000004394	-	88	39.655	ENSATEG00000015240	mrpl11	100	38.542	Anabas_testudineus
ENSCING00000004394	-	95	40.957	ENSANAG00000021898	MRPL11	96	40.957	Aotus_nancymaae
ENSCING00000004394	-	88	40.462	ENSACLG00000018663	mrpl11	100	38.974	Astatotilapia_calliptera
ENSCING00000004394	-	85	39.286	ENSAMXG00000036903	mrpl11	100	37.696	Astyanax_mexicanus
ENSCING00000004394	-	93	40.217	ENSBTAG00000053687	MRPL11	96	40.426	Bos_taurus
ENSCING00000004394	-	84	40.719	WBGene00015133	mrpl-11	84	40.719	Caenorhabditis_elegans
ENSCING00000004394	-	95	40.314	ENSCJAG00000001470	MRPL11	96	40.314	Callithrix_jacchus
ENSCING00000004394	-	93	41.304	ENSCAFG00000012706	MRPL11	96	41.489	Canis_familiaris
ENSCING00000004394	-	93	41.304	ENSCAFG00020015432	MRPL11	96	41.489	Canis_lupus_dingo
ENSCING00000004394	-	93	39.674	ENSCHIG00000014851	MRPL11	96	39.894	Capra_hircus
ENSCING00000004394	-	93	40.761	ENSTSYG00000008712	MRPL11	96	40.957	Carlito_syrichta
ENSCING00000004394	-	93	41.304	ENSCPOG00000000687	MRPL11	96	41.489	Cavia_porcellus
ENSCING00000004394	-	95	40.957	ENSCCAG00000030195	MRPL11	96	40.957	Cebus_capucinus
ENSCING00000004394	-	95	39.894	ENSCATG00000029345	MRPL11	96	39.894	Cercocebus_atys
ENSCING00000004394	-	93	41.848	ENSCLAG00000016161	MRPL11	96	42.021	Chinchilla_lanigera
ENSCING00000004394	-	95	39.894	ENSCSAG00000008217	MRPL11	96	39.894	Chlorocebus_sabaeus
ENSCING00000004394	-	80	41.401	ENSCHOG00000010471	MRPL11	100	41.401	Choloepus_hoffmanni
ENSCING00000004394	-	95	40.426	ENSCANG00000029750	MRPL11	96	40.426	Colobus_angolensis_palliatus
ENSCING00000004394	-	85	40.120	ENSCGRG00001012748	Mrpl11	97	38.095	Cricetulus_griseus_chok1gshd
ENSCING00000004394	-	85	40.120	ENSCGRG00000017537	Mrpl11	97	38.095	Cricetulus_griseus_crigri
ENSCING00000004394	-	88	41.379	ENSCSEG00000004826	mrpl11	100	39.487	Cynoglossus_semilaevis
ENSCING00000004394	-	88	39.655	ENSCVAG00000018209	mrpl11	89	39.655	Cyprinodon_variegatus
ENSCING00000004394	-	87	39.535	ENSDARG00000013075	mrpl11	88	39.535	Danio_rerio
ENSCING00000004394	-	90	40.449	ENSDNOG00000037861	MRPL11	96	39.894	Dasypus_novemcinctus
ENSCING00000004394	-	87	40.698	ENSDORG00000023531	Mrpl11	100	43.312	Dipodomys_ordii
ENSCING00000004394	-	94	37.368	FBgn0038234	mRpL11	95	37.368	Drosophila_melanogaster
ENSCING00000004394	-	95	39.894	ENSETEG00000015216	MRPL11	96	39.894	Echinops_telfairi
ENSCING00000004394	-	70	39.855	ENSEBUG00000008014	mrpl11	74	40.299	Eptatretus_burgeri
ENSCING00000004394	-	93	38.251	ENSEASG00005004988	MRPL11	96	38.503	Equus_asinus_asinus
ENSCING00000004394	-	93	39.130	ENSECAG00000013737	MRPL11	96	39.362	Equus_caballus
ENSCING00000004394	-	96	40.526	ENSEEUG00000011113	MRPL11	96	40.526	Erinaceus_europaeus
ENSCING00000004394	-	87	40.936	ENSELUG00000002807	mrpl11	91	41.618	Esox_lucius
ENSCING00000004394	-	90	41.011	ENSFCAG00000028353	MRPL11	96	40.426	Felis_catus
ENSCING00000004394	-	93	41.304	ENSFDAG00000011509	MRPL11	96	41.489	Fukomys_damarensis
ENSCING00000004394	-	88	38.506	ENSFHEG00000015521	mrpl11	100	36.923	Fundulus_heteroclitus
ENSCING00000004394	-	88	39.429	ENSGMOG00000004943	mrpl11	94	39.429	Gadus_morhua
ENSCING00000004394	-	88	40.805	ENSGAFG00000019857	mrpl11	89	40.805	Gambusia_affinis
ENSCING00000004394	-	88	39.429	ENSGACG00000017077	mrpl11	90	39.429	Gasterosteus_aculeatus
ENSCING00000004394	-	85	46.707	ENSGAGG00000013814	MRPL11	91	46.023	Gopherus_agassizii
ENSCING00000004394	-	96	40.000	ENSGGOG00000001300	MRPL11	97	40.000	Gorilla_gorilla
ENSCING00000004394	-	88	40.462	ENSHBUG00000013559	mrpl11	100	38.974	Haplochromis_burtoni
ENSCING00000004394	-	93	41.304	ENSHGLG00000016487	MRPL11	96	41.489	Heterocephalus_glaber_female
ENSCING00000004394	-	93	41.304	ENSHGLG00100017113	MRPL11	96	41.489	Heterocephalus_glaber_male
ENSCING00000004394	-	88	41.379	ENSHCOG00000004011	mrpl11	88	41.379	Hippocampus_comes
ENSCING00000004394	-	88	39.884	ENSIPUG00000021526	MRPL11	100	38.743	Ictalurus_punctatus
ENSCING00000004394	-	80	41.401	ENSSTOG00000025971	MRPL11	99	41.401	Ictidomys_tridecemlineatus
ENSCING00000004394	-	93	39.674	ENSJJAG00000020430	Mrpl11	96	39.894	Jaculus_jaculus
ENSCING00000004394	-	88	40.805	ENSKMAG00000003125	mrpl11	88	40.805	Kryptolebias_marmoratus
ENSCING00000004394	-	88	41.379	ENSLBEG00000007638	mrpl11	100	39.487	Labrus_bergylta
ENSCING00000004394	-	68	40.299	ENSLACG00000005779	MRPL11	93	40.541	Latimeria_chalumnae
ENSCING00000004394	-	95	42.632	ENSLOCG00000000617	mrpl11	95	42.632	Lepisosteus_oculatus
ENSCING00000004394	-	96	38.947	ENSLAFG00000011143	MRPL11	97	38.947	Loxodonta_africana
ENSCING00000004394	-	95	39.894	ENSMFAG00000042321	MRPL11	96	39.894	Macaca_fascicularis
ENSCING00000004394	-	95	39.894	ENSMMUG00000008876	MRPL11	96	39.894	Macaca_mulatta
ENSCING00000004394	-	95	39.894	ENSMNEG00000041903	MRPL11	96	39.894	Macaca_nemestrina
ENSCING00000004394	-	95	39.894	ENSMLEG00000044104	MRPL11	96	39.894	Mandrillus_leucophaeus
ENSCING00000004394	-	88	40.230	ENSMAMG00000021038	mrpl11	89	40.230	Mastacembelus_armatus
ENSCING00000004394	-	88	40.462	ENSMZEG00005005523	mrpl11	100	38.974	Maylandia_zebra
ENSCING00000004394	-	85	40.719	ENSMAUG00000006941	Mrpl11	97	38.624	Mesocricetus_auratus
ENSCING00000004394	-	93	40.217	ENSMICG00000003759	MRPL11	96	40.426	Microcebus_murinus
ENSCING00000004394	-	85	41.071	ENSMOCG00000018594	Mrpl11	97	38.624	Microtus_ochrogaster
ENSCING00000004394	-	88	32.370	ENSMMOG00000002541	mrpl11	100	31.443	Mola_mola
ENSCING00000004394	-	85	40.719	ENSMODG00000008273	MRPL11	90	40.449	Monodelphis_domestica
ENSCING00000004394	-	93	39.344	ENSMALG00000011049	mrpl11	99	39.344	Monopterus_albus
ENSCING00000004394	-	93	38.587	MGP_CAROLIEiJ_G0022526	Mrpl11	96	38.830	Mus_caroli
ENSCING00000004394	-	93	38.587	ENSMUSG00000024902	Mrpl11	96	38.830	Mus_musculus
ENSCING00000004394	-	85	39.521	MGP_PahariEiJ_G0014023	Mrpl11	97	37.566	Mus_pahari
ENSCING00000004394	-	93	38.587	MGP_SPRETEiJ_G0023440	Mrpl11	96	38.830	Mus_spretus
ENSCING00000004394	-	93	41.848	ENSMPUG00000003047	MRPL11	96	42.021	Mustela_putorius_furo
ENSCING00000004394	-	93	41.848	ENSMLUG00000004047	MRPL11	95	42.021	Myotis_lucifugus
ENSCING00000004394	-	93	40.217	ENSNGAG00000005875	Mrpl11	96	40.426	Nannospalax_galili
ENSCING00000004394	-	87	39.535	ENSNBRG00000023089	mrpl11	100	38.462	Neolamprologus_brichardi
ENSCING00000004394	-	80	41.401	ENSNLEG00000028893	MRPL11	87	41.401	Nomascus_leucogenys
ENSCING00000004394	-	90	41.011	ENSMEUG00000010291	MRPL11	90	41.011	Notamacropus_eugenii
ENSCING00000004394	-	90	41.573	ENSODEG00000014340	-	84	41.573	Octodon_degus
ENSCING00000004394	-	90	41.573	ENSODEG00000017704	-	98	41.573	Octodon_degus
ENSCING00000004394	-	67	36.364	ENSONIG00000005480	mrpl11	92	35.484	Oreochromis_niloticus
ENSCING00000004394	-	93	40.217	ENSOCUG00000020926	MRPL11	96	40.426	Oryctolagus_cuniculus
ENSCING00000004394	-	88	40.230	ENSORLG00000001990	mrpl11	89	40.230	Oryzias_latipes
ENSCING00000004394	-	88	40.230	ENSORLG00020020145	mrpl11	89	40.230	Oryzias_latipes_hni
ENSCING00000004394	-	88	40.230	ENSORLG00015009657	mrpl11	89	40.230	Oryzias_latipes_hsok
ENSCING00000004394	-	88	40.230	ENSOMEG00000017598	mrpl11	89	40.230	Oryzias_melastigma
ENSCING00000004394	-	85	42.515	ENSOGAG00000010448	MRPL11	84	42.515	Otolemur_garnettii
ENSCING00000004394	-	93	39.674	ENSOARG00000005178	MRPL11	96	39.894	Ovis_aries
ENSCING00000004394	-	95	39.894	ENSPPAG00000028194	MRPL11	96	39.894	Pan_paniscus
ENSCING00000004394	-	93	40.217	ENSPPRG00000006994	MRPL11	96	40.426	Panthera_pardus
ENSCING00000004394	-	93	40.217	ENSPTIG00000007086	MRPL11	96	40.426	Panthera_tigris_altaica
ENSCING00000004394	-	95	39.894	ENSPTRG00000003924	MRPL11	96	39.894	Pan_troglodytes
ENSCING00000004394	-	95	39.894	ENSPANG00000018675	MRPL11	96	39.894	Papio_anubis
ENSCING00000004394	-	97	38.021	ENSPKIG00000024583	mrpl11	100	38.021	Paramormyrops_kingsleyae
ENSCING00000004394	-	85	46.707	ENSPSIG00000003131	MRPL11	100	44.330	Pelodiscus_sinensis
ENSCING00000004394	-	88	42.529	ENSPMGG00000017736	mrpl11	89	42.529	Periophthalmus_magnuspinnatus
ENSCING00000004394	-	85	41.317	ENSPEMG00000013254	Mrpl11	97	39.153	Peromyscus_maniculatus_bairdii
ENSCING00000004394	-	90	39.888	ENSPCIG00000008435	MRPL11	90	39.888	Phascolarctos_cinereus
ENSCING00000004394	-	88	41.954	ENSPFOG00000009559	mrpl11	89	41.954	Poecilia_formosa
ENSCING00000004394	-	88	41.379	ENSPLAG00000011291	mrpl11	89	41.379	Poecilia_latipinna
ENSCING00000004394	-	56	34.862	ENSPMEG00000018314	mrpl11	73	34.862	Poecilia_mexicana
ENSCING00000004394	-	88	33.526	ENSPREG00000008953	mrpl11	87	33.526	Poecilia_reticulata
ENSCING00000004394	-	95	39.894	ENSPPYG00000003025	MRPL11	96	39.894	Pongo_abelii
ENSCING00000004394	-	95	40.426	ENSPCAG00000008371	MRPL11	96	40.426	Procavia_capensis
ENSCING00000004394	-	93	39.674	ENSPCOG00000013514	MRPL11	95	41.139	Propithecus_coquereli
ENSCING00000004394	-	88	40.462	ENSPNYG00000013744	mrpl11	100	38.974	Pundamilia_nyererei
ENSCING00000004394	-	88	39.080	ENSPNAG00000020525	mrpl11	100	37.696	Pygocentrus_nattereri
ENSCING00000004394	-	98	36.788	ENSRNOG00000019970	mrpl11	96	38.298	Rattus_norvegicus
ENSCING00000004394	-	95	40.426	ENSRBIG00000030370	MRPL11	96	40.426	Rhinopithecus_bieti
ENSCING00000004394	-	97	39.896	ENSRROG00000036860	-	98	39.896	Rhinopithecus_roxellana
ENSCING00000004394	-	95	40.426	ENSRROG00000041021	-	96	40.426	Rhinopithecus_roxellana
ENSCING00000004394	-	95	40.957	ENSSBOG00000019968	MRPL11	96	40.957	Saimiri_boliviensis_boliviensis
ENSCING00000004394	-	85	41.317	ENSSHAG00000009446	MRPL11	90	41.011	Sarcophilus_harrisii
ENSCING00000004394	-	88	39.655	ENSSFOG00015009200	mrpl11	93	39.665	Scleropages_formosus
ENSCING00000004394	-	85	42.857	ENSSMAG00000016343	mrpl11	100	40.722	Scophthalmus_maximus
ENSCING00000004394	-	88	40.230	ENSSDUG00000018338	mrpl11	100	38.462	Seriola_dumerili
ENSCING00000004394	-	88	40.230	ENSSLDG00000022855	mrpl11	100	38.462	Seriola_lalandi_dorsalis
ENSCING00000004394	-	88	40.805	ENSSPAG00000006573	mrpl11	99	39.594	Stegastes_partitus
ENSCING00000004394	-	93	39.674	ENSSSCG00000012943	MRPL11	96	39.894	Sus_scrofa
ENSCING00000004394	-	68	39.552	ENSTRUG00000011804	mrpl11	77	39.552	Takifugu_rubripes
ENSCING00000004394	-	67	36.842	ENSTNIG00000016824	mrpl11	86	36.842	Tetraodon_nigroviridis
ENSCING00000004394	-	93	40.217	ENSTTRG00000002678	MRPL11	96	40.426	Tursiops_truncatus
ENSCING00000004394	-	94	41.081	ENSUAMG00000014879	MRPL11	95	41.081	Ursus_americanus
ENSCING00000004394	-	94	41.081	ENSUMAG00000011244	MRPL11	95	41.081	Ursus_maritimus
ENSCING00000004394	-	93	36.413	ENSVPAG00000003170	MRPL11	96	36.702	Vicugna_pacos
ENSCING00000004394	-	85	43.114	ENSVVUG00000027010	MRPL11	96	40.957	Vulpes_vulpes
ENSCING00000004394	-	85	42.262	ENSXETG00000020574	mrpl11	95	40.860	Xenopus_tropicalis
ENSCING00000004394	-	68	38.806	ENSXCOG00000015719	mrpl11	78	39.098	Xiphophorus_couchianus
ENSCING00000004394	-	88	41.379	ENSXMAG00000023368	mrpl11	88	41.379	Xiphophorus_maculatus