EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000004431 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 2581 bases
Position: chrHT000101.1:269462-272042
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000009152	RNase_T	PF00929.24	2.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000009152	-	925	-	ENSCINP00000009152	196 (aa)	-	F6Y3H6

Gene Model

Click here to download ENSCING00000004431's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000004431's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000004431	-	81	37.195	ENSG00000172183	ISG20	87	37.195	Homo_sapiens
ENSCING00000004431	-	96	38.614	ENSAPOG00000008681	-	56	38.614	Acanthochromis_polyacanthus
ENSCING00000004431	-	81	40.994	ENSAMEG00000012803	ISG20	91	40.994	Ailuropoda_melanoleuca
ENSCING00000004431	-	97	40.686	ENSACIG00000012040	isg20	96	38.509	Amphilophus_citrinellus
ENSCING00000004431	-	97	39.216	ENSAOCG00000002636	isg20	57	39.216	Amphiprion_ocellaris
ENSCING00000004431	-	97	39.216	ENSAPEG00000012004	isg20	57	39.216	Amphiprion_percula
ENSCING00000004431	-	97	40.196	ENSATEG00000021719	isg20	57	40.196	Anabas_testudineus
ENSCING00000004431	-	95	30.348	ENSACAG00000013905	-	71	30.348	Anolis_carolinensis
ENSCING00000004431	-	96	39.801	ENSACLG00000023402	isg20	57	39.801	Astatotilapia_calliptera
ENSCING00000004431	-	96	38.308	ENSAMXG00000041093	isg20	51	38.308	Astyanax_mexicanus
ENSCING00000004431	-	81	37.037	ENSBTAG00000014762	ISG20	92	37.037	Bos_taurus
ENSCING00000004431	-	81	38.889	ENSCJAG00000034923	ISG20	87	38.889	Callithrix_jacchus
ENSCING00000004431	-	81	40.741	ENSCAFG00000011525	ISG20	92	40.741	Canis_familiaris
ENSCING00000004431	-	81	40.741	ENSCAFG00020018837	ISG20	92	40.741	Canis_lupus_dingo
ENSCING00000004431	-	81	38.272	ENSCHIG00000014526	ISG20	92	38.272	Capra_hircus
ENSCING00000004431	-	80	40.000	ENSTSYG00000030528	ISG20	86	40.000	Carlito_syrichta
ENSCING00000004431	-	80	37.888	ENSCAPG00000011672	ISG20	85	37.888	Cavia_aperea
ENSCING00000004431	-	89	36.872	ENSCPOG00000036489	ISG20	90	36.872	Cavia_porcellus
ENSCING00000004431	-	81	38.272	ENSCCAG00000025395	ISG20	87	38.272	Cebus_capucinus
ENSCING00000004431	-	81	37.195	ENSCATG00000042494	ISG20	87	37.195	Cercocebus_atys
ENSCING00000004431	-	80	37.888	ENSCLAG00000008100	ISG20	85	37.888	Chinchilla_lanigera
ENSCING00000004431	-	81	37.805	ENSCSAG00000017194	ISG20	87	37.805	Chlorocebus_sabaeus
ENSCING00000004431	-	81	37.195	ENSCANG00000032616	ISG20	87	37.195	Colobus_angolensis_palliatus
ENSCING00000004431	-	81	39.024	ENSCGRG00001016300	-	94	37.500	Cricetulus_griseus_chok1gshd
ENSCING00000004431	-	81	39.024	ENSCGRG00000000609	-	86	39.024	Cricetulus_griseus_crigri
ENSCING00000004431	-	97	37.681	ENSCSEG00000000768	isg20	59	37.681	Cynoglossus_semilaevis
ENSCING00000004431	-	97	36.538	ENSCVAG00000009300	isg20	94	36.893	Cyprinodon_variegatus
ENSCING00000004431	-	96	37.931	ENSDARG00000079783	isg20	58	37.931	Danio_rerio
ENSCING00000004431	-	83	43.114	ENSDARG00000102266	isg20l2	50	43.114	Danio_rerio
ENSCING00000004431	-	81	37.654	ENSDNOG00000049229	ISG20	87	37.654	Dasypus_novemcinctus
ENSCING00000004431	-	83	38.922	ENSEBUG00000009658	-	79	38.922	Eptatretus_burgeri
ENSCING00000004431	-	87	41.954	ENSEBUG00000010461	ISG20	60	41.954	Eptatretus_burgeri
ENSCING00000004431	-	81	37.654	ENSEASG00005015360	ISG20	92	37.654	Equus_asinus_asinus
ENSCING00000004431	-	81	38.272	ENSECAG00000019499	ISG20	92	38.272	Equus_caballus
ENSCING00000004431	-	95	39.698	ENSELUG00000003116	isg20	51	39.698	Esox_lucius
ENSCING00000004431	-	81	41.358	ENSFCAG00000005151	ISG20	92	41.358	Felis_catus
ENSCING00000004431	-	81	38.415	ENSFDAG00000007444	ISG20	87	38.415	Fukomys_damarensis
ENSCING00000004431	-	97	37.019	ENSFHEG00000018658	isg20	95	32.934	Fundulus_heteroclitus
ENSCING00000004431	-	99	36.538	ENSGMOG00000001258	isg20	93	36.538	Gadus_morhua
ENSCING00000004431	-	95	39.196	ENSGALG00000044204	ISG20	78	40.201	Gallus_gallus
ENSCING00000004431	-	97	39.000	ENSGAFG00000005685	isg20	96	36.478	Gambusia_affinis
ENSCING00000004431	-	97	38.049	ENSGACG00000007047	isg20	63	38.049	Gasterosteus_aculeatus
ENSCING00000004431	-	81	38.650	ENSGAGG00000013542	ISG20	91	38.650	Gopherus_agassizii
ENSCING00000004431	-	81	37.195	ENSGGOG00000010365	ISG20	87	37.195	Gorilla_gorilla
ENSCING00000004431	-	96	39.801	ENSHBUG00000008380	isg20	57	39.801	Haplochromis_burtoni
ENSCING00000004431	-	81	37.805	ENSHGLG00000009077	ISG20	87	37.805	Heterocephalus_glaber_female
ENSCING00000004431	-	81	37.805	ENSHGLG00100005004	ISG20	87	37.805	Heterocephalus_glaber_male
ENSCING00000004431	-	83	41.916	ENSHCOG00000013913	isg20l2	82	37.821	Hippocampus_comes
ENSCING00000004431	-	96	37.811	ENSIPUG00000003320	isg20	56	37.811	Ictalurus_punctatus
ENSCING00000004431	-	81	37.195	ENSSTOG00000020467	ISG20	87	37.195	Ictidomys_tridecemlineatus
ENSCING00000004431	-	81	37.423	ENSJJAG00000010531	-	86	37.423	Jaculus_jaculus
ENSCING00000004431	-	98	39.024	ENSKMAG00000006695	isg20	57	39.109	Kryptolebias_marmoratus
ENSCING00000004431	-	97	39.109	ENSLBEG00000004494	isg20	57	39.109	Labrus_bergylta
ENSCING00000004431	-	95	40.594	ENSLACG00000018339	-	70	40.594	Latimeria_chalumnae
ENSCING00000004431	-	95	42.000	ENSLOCG00000014240	isg20	88	42.000	Lepisosteus_oculatus
ENSCING00000004431	-	81	37.195	ENSMFAG00000032331	ISG20	87	37.195	Macaca_fascicularis
ENSCING00000004431	-	81	37.195	ENSMMUG00000007669	ISG20	87	37.195	Macaca_mulatta
ENSCING00000004431	-	81	37.195	ENSMNEG00000030310	ISG20	87	37.195	Macaca_nemestrina
ENSCING00000004431	-	81	37.195	ENSMLEG00000038761	ISG20	87	37.195	Mandrillus_leucophaeus
ENSCING00000004431	-	96	39.801	ENSMAMG00000023057	isg20	56	39.801	Mastacembelus_armatus
ENSCING00000004431	-	96	39.801	ENSMZEG00005011688	isg20	57	39.801	Maylandia_zebra
ENSCING00000004431	-	81	36.420	ENSMAUG00000015001	-	86	39.024	Mesocricetus_auratus
ENSCING00000004431	-	80	39.375	ENSMICG00000027508	ISG20	91	39.375	Microcebus_murinus
ENSCING00000004431	-	81	41.718	ENSMOCG00000005940	-	89	41.718	Microtus_ochrogaster
ENSCING00000004431	-	97	41.791	ENSMMOG00000019013	isg20	89	41.791	Mola_mola
ENSCING00000004431	-	81	42.593	ENSMODG00000019583	ISG20	89	42.593	Monodelphis_domestica
ENSCING00000004431	-	96	41.294	ENSMALG00000016734	isg20	57	41.294	Monopterus_albus
ENSCING00000004431	-	81	40.123	MGP_CAROLIEiJ_G0029873	-	94	38.028	Mus_caroli
ENSCING00000004431	-	81	40.123	ENSMUSG00000039236	Isg20	94	38.028	Mus_musculus
ENSCING00000004431	-	81	40.123	MGP_PahariEiJ_G0013095	-	94	38.732	Mus_pahari
ENSCING00000004431	-	81	39.506	MGP_SPRETEiJ_G0030975	-	94	37.324	Mus_spretus
ENSCING00000004431	-	81	38.272	ENSMPUG00000015816	ISG20	92	38.272	Mustela_putorius_furo
ENSCING00000004431	-	81	38.415	ENSNGAG00000019782	-	89	38.415	Nannospalax_galili
ENSCING00000004431	-	96	40.299	ENSNBRG00000016499	isg20	56	40.299	Neolamprologus_brichardi
ENSCING00000004431	-	73	36.486	ENSNLEG00000033379	ISG20	86	36.486	Nomascus_leucogenys
ENSCING00000004431	-	80	37.267	ENSODEG00000015032	ISG20	86	37.267	Octodon_degus
ENSCING00000004431	-	96	39.303	ENSONIG00000015622	isg20	56	39.303	Oreochromis_niloticus
ENSCING00000004431	-	83	38.323	ENSONIG00000001534	isg20l2	87	38.323	Oreochromis_niloticus
ENSCING00000004431	-	74	36.735	ENSOANG00000006380	ISG20	77	36.735	Ornithorhynchus_anatinus
ENSCING00000004431	-	81	38.650	ENSOCUG00000023346	ISG20	87	38.650	Oryctolagus_cuniculus
ENSCING00000004431	-	81	38.415	ENSORLG00000029585	isg20	91	32.919	Oryzias_latipes
ENSCING00000004431	-	97	35.784	ENSORLG00020002307	isg20	58	35.784	Oryzias_latipes_hni
ENSCING00000004431	-	97	35.784	ENSORLG00015016089	isg20	94	32.911	Oryzias_latipes_hsok
ENSCING00000004431	-	97	36.765	ENSOMEG00000003990	isg20	93	38.922	Oryzias_melastigma
ENSCING00000004431	-	80	40.625	ENSOGAG00000004742	ISG20	91	40.625	Otolemur_garnettii
ENSCING00000004431	-	81	34.375	ENSOARG00000010964	ISG20	86	34.375	Ovis_aries
ENSCING00000004431	-	81	37.037	ENSPPAG00000028868	ISG20	87	37.037	Pan_paniscus
ENSCING00000004431	-	81	41.358	ENSPPRG00000023560	ISG20	92	41.358	Panthera_pardus
ENSCING00000004431	-	70	39.855	ENSPTIG00000018498	ISG20	68	39.855	Panthera_tigris_altaica
ENSCING00000004431	-	81	37.195	ENSPTRG00000044668	ISG20	87	37.195	Pan_troglodytes
ENSCING00000004431	-	81	37.195	ENSPANG00000034658	ISG20	87	37.195	Papio_anubis
ENSCING00000004431	-	99	37.981	ENSPKIG00000015180	isg20	55	37.981	Paramormyrops_kingsleyae
ENSCING00000004431	-	96	37.811	ENSPMGG00000021232	isg20	96	37.811	Periophthalmus_magnuspinnatus
ENSCING00000004431	-	81	39.634	ENSPEMG00000020302	-	86	39.634	Peromyscus_maniculatus_bairdii
ENSCING00000004431	-	83	40.476	ENSPMAG00000001569	ISG20	88	40.476	Petromyzon_marinus
ENSCING00000004431	-	85	38.012	ENSPMAG00000000577	isg20	91	38.012	Petromyzon_marinus
ENSCING00000004431	-	81	41.975	ENSPCIG00000006405	ISG20	84	41.975	Phascolarctos_cinereus
ENSCING00000004431	-	97	38.500	ENSPFOG00000003318	isg20	58	38.500	Poecilia_formosa
ENSCING00000004431	-	97	38.500	ENSPLAG00000005932	isg20	89	37.705	Poecilia_latipinna
ENSCING00000004431	-	97	38.500	ENSPMEG00000016899	isg20	87	38.500	Poecilia_mexicana
ENSCING00000004431	-	54	41.667	ENSPREG00000005954	isg20	64	40.000	Poecilia_reticulata
ENSCING00000004431	-	81	37.195	ENSPPYG00000006756	ISG20	87	37.195	Pongo_abelii
ENSCING00000004431	-	80	35.443	ENSPCOG00000015727	ISG20	89	39.375	Propithecus_coquereli
ENSCING00000004431	-	96	39.801	ENSPNYG00000010204	isg20	56	39.801	Pundamilia_nyererei
ENSCING00000004431	-	96	38.308	ENSPNAG00000022301	isg20	54	38.308	Pygocentrus_nattereri
ENSCING00000004431	-	80	39.375	ENSRNOG00000054561	Isg20	90	38.994	Rattus_norvegicus
ENSCING00000004431	-	81	37.195	ENSRBIG00000041506	ISG20	87	37.195	Rhinopithecus_bieti
ENSCING00000004431	-	81	37.195	ENSRROG00000043326	ISG20	87	37.195	Rhinopithecus_roxellana
ENSCING00000004431	-	81	38.272	ENSSBOG00000031539	ISG20	87	38.272	Saimiri_boliviensis_boliviensis
ENSCING00000004431	-	81	40.741	ENSSHAG00000017049	ISG20	92	40.741	Sarcophilus_harrisii
ENSCING00000004431	-	96	37.745	ENSSFOG00015018481	isg20	51	37.379	Scleropages_formosus
ENSCING00000004431	-	96	38.806	ENSSMAG00000004520	isg20	61	38.806	Scophthalmus_maximus
ENSCING00000004431	-	98	40.000	ENSSDUG00000000366	isg20	57	40.000	Seriola_dumerili
ENSCING00000004431	-	98	40.488	ENSSLDG00000002860	isg20	57	40.488	Seriola_lalandi_dorsalis
ENSCING00000004431	-	98	40.488	ENSSLDG00000003333	-	57	40.488	Seriola_lalandi_dorsalis
ENSCING00000004431	-	85	36.471	ENSSPUG00000012061	ISG20	95	36.471	Sphenodon_punctatus
ENSCING00000004431	-	95	38.500	ENSSPUG00000012053	-	53	39.000	Sphenodon_punctatus
ENSCING00000004431	-	96	38.308	ENSSPAG00000020558	isg20	56	38.308	Stegastes_partitus
ENSCING00000004431	-	81	35.625	ENSSSCG00000024867	ISG20	92	38.272	Sus_scrofa
ENSCING00000004431	-	83	39.521	ENSTRUG00000021768	isg20l2	50	39.521	Takifugu_rubripes
ENSCING00000004431	-	97	39.706	ENSTRUG00000015658	isg20	55	39.706	Takifugu_rubripes
ENSCING00000004431	-	90	41.081	ENSTNIG00000010389	isg20	89	41.081	Tetraodon_nigroviridis
ENSCING00000004431	-	74	40.136	ENSUAMG00000019065	ISG20	95	40.136	Ursus_americanus
ENSCING00000004431	-	81	40.741	ENSVVUG00000012013	ISG20	92	40.741	Vulpes_vulpes
ENSCING00000004431	-	85	45.882	ENSXETG00000007588	aen	65	45.882	Xenopus_tropicalis
ENSCING00000004431	-	97	39.000	ENSXMAG00000013066	isg20	58	39.000	Xiphophorus_maculatus