EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000004440 (Gene tree)
Gene ID: 100187036
Gene Symbol: -
Alias: -
Full Name: NIPA-like protein
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 3482 bases
Position: chr2:4548183-4551664
Accession: 100187036
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000009166	zf-C3HC	PF07967.13	1.7e-19	1	1
ENSCINP00000009166	Rsm1	PF08600.10	5.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000009166	-	1762	XM_002128796	ENSCINP00000009166	405 (aa)	XP_002128832	F6XF81

Gene Model

Click here to download ENSCING00000004440's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000004440's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000004440	-	58	30.116	ENSAMEG00000005425	ZC3HC1	50	30.350	Ailuropoda_melanoleuca
ENSCING00000004440	-	54	32.618	ENSCHOG00000011846	ZC3HC1	50	32.618	Choloepus_hoffmanni
ENSCING00000004440	-	99	57.985	ENSCSAVG00000003830	-	99	57.985	Ciona_savignyi
ENSCING00000004440	-	76	30.422	ENSLACG00000013032	ZC3HC1	73	30.422	Latimeria_chalumnae
ENSCING00000004440	-	58	31.496	ENSMOCG00000015239	Zc3hc1	51	31.890	Microtus_ochrogaster
ENSCING00000004440	-	61	31.579	ENSMEUG00000011023	ZC3HC1	52	31.579	Notamacropus_eugenii
ENSCING00000004440	-	56	32.083	ENSSHAG00000002529	ZC3HC1	50	32.083	Sarcophilus_harrisii
ENSCING00000004440	-	63	30.483	ENSXETG00000033900	zc3hc1	56	30.483	Xenopus_tropicalis