EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000004543 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 5221 bases
Position: chr9:1325833-1331053
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000009389	RRM_1	PF00076.22	4.5e-06	1	1
ENSCINP00000009389	G-patch	PF01585.23	1.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000009389	-	1321	-	ENSCINP00000009389	191 (aa)	-	F6ZQQ7

Gene Model

Click here to download ENSCING00000004543's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000004543's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000004543	-	52	42.718	ENSAPOG00000022094	-	80	42.718	Acanthochromis_polyacanthus
ENSCING00000004543	-	97	55.676	ENSACAG00000005418	RBM17	50	55.676	Anolis_carolinensis
ENSCING00000004543	-	98	55.615	ENSANAG00000030127	RBM17	85	63.208	Aotus_nancymaae
ENSCING00000004543	-	98	50.267	ENSANAG00000019330	-	86	58.491	Aotus_nancymaae
ENSCING00000004543	-	98	55.615	ENSTSYG00000001165	RBM17	89	63.208	Carlito_syrichta
ENSCING00000004543	-	99	51.562	ENSCAPG00000006275	RBM17	56	51.053	Cavia_aperea
ENSCING00000004543	-	98	55.615	ENSCCAG00000018655	RBM17	85	63.208	Cebus_capucinus
ENSCING00000004543	-	98	55.615	ENSCATG00000041566	RBM17	85	63.208	Cercocebus_atys
ENSCING00000004543	-	51	35.644	ENSCING00000019470	-	70	34.951	Ciona_intestinalis
ENSCING00000004543	-	98	55.615	ENSCANG00000030987	RBM17	85	63.208	Colobus_angolensis_palliatus
ENSCING00000004543	-	98	51.872	ENSCANG00000023715	-	75	57.547	Colobus_angolensis_palliatus
ENSCING00000004543	-	88	48.718	FBgn0086683	Spf45	54	48.718	Drosophila_melanogaster
ENSCING00000004543	-	99	49.485	ENSEBUG00000010253	rbm17	59	47.692	Eptatretus_burgeri
ENSCING00000004543	-	60	60.169	ENSGGOG00000044184	-	85	63.208	Gorilla_gorilla
ENSCING00000004543	-	98	51.596	ENSHGLG00100010556	-	53	51.337	Heterocephalus_glaber_male
ENSCING00000004543	-	98	55.615	ENSMFAG00000035521	RBM17	85	63.208	Macaca_fascicularis
ENSCING00000004543	-	98	55.615	ENSMMUG00000015152	RBM17	85	63.208	Macaca_mulatta
ENSCING00000004543	-	98	55.615	ENSMNEG00000017264	RBM17	85	63.208	Macaca_nemestrina
ENSCING00000004543	-	98	55.615	ENSMLEG00000029340	RBM17	85	63.208	Mandrillus_leucophaeus
ENSCING00000004543	-	50	63.158	ENSMICG00000047113	-	72	65.217	Microcebus_murinus
ENSCING00000004543	-	96	47.283	ENSNGAG00000000663	-	52	46.277	Nannospalax_galili
ENSCING00000004543	-	98	55.615	ENSNLEG00000033350	RBM17	85	63.208	Nomascus_leucogenys
ENSCING00000004543	-	59	59.292	ENSOCUG00000004516	-	68	63.208	Oryctolagus_cuniculus
ENSCING00000004543	-	98	54.229	ENSOMEG00000012060	rbm17	100	58.537	Oryzias_melastigma
ENSCING00000004543	-	98	55.615	ENSPPAG00000032347	RBM17	85	63.208	Pan_paniscus
ENSCING00000004543	-	98	55.615	ENSPTRG00000002265	RBM17	85	63.208	Pan_troglodytes
ENSCING00000004543	-	98	55.615	ENSPANG00000023425	RBM17	85	63.208	Papio_anubis
ENSCING00000004543	-	98	57.979	ENSPNYG00000015274	rbm17	50	57.979	Pundamilia_nyererei
ENSCING00000004543	-	98	55.615	ENSRBIG00000043727	RBM17	85	63.208	Rhinopithecus_bieti
ENSCING00000004543	-	98	55.615	ENSRROG00000044142	RBM17	85	63.208	Rhinopithecus_roxellana
ENSCING00000004543	-	98	55.615	ENSSBOG00000031661	-	85	63.208	Saimiri_boliviensis_boliviensis
ENSCING00000004543	-	97	56.757	ENSTTRG00000001344	RBM17	51	56.150	Tursiops_truncatus
ENSCING00000004543	-	59	58.929	ENSVVUG00000019160	-	90	62.264	Vulpes_vulpes