EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000004577 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: ADP-ribosylation factor 6-like
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 525 bases
Position: chr1:3969186-3969710
Accession: 104266814
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000009452	GTP_EFTU	PF00009.27	1.1e-06	1	1
ENSCINP00000009452	MMR_HSR1	PF01926.23	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000009452	-	525	-	ENSCINP00000009452	174 (aa)	XP_009862219	F6XBW4

Gene Model

Click here to download ENSCING00000004577's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000004577's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000004577	-	95	43.976	ENSG00000120805	ARL1	95	44.586	Homo_sapiens
ENSCING00000004577	-	97	43.529	ENSAPOG00000002469	arl1	95	43.529	Acanthochromis_polyacanthus
ENSCING00000004577	-	92	44.375	ENSAMEG00000016452	ARL1	88	44.444	Ailuropoda_melanoleuca
ENSCING00000004577	-	94	43.293	ENSACIG00000007953	arl1	91	43.293	Amphilophus_citrinellus
ENSCING00000004577	-	97	43.529	ENSAOCG00000013008	arl1	93	43.529	Amphiprion_ocellaris
ENSCING00000004577	-	97	43.529	ENSAPEG00000013187	arl1	95	43.529	Amphiprion_percula
ENSCING00000004577	-	97	43.529	ENSATEG00000005559	arl1	90	43.529	Anabas_testudineus
ENSCING00000004577	-	93	45.062	ENSAPLG00000016092	ARL1	88	45.062	Anas_platyrhynchos
ENSCING00000004577	-	93	45.062	ENSACAG00000011602	ARL1	88	45.062	Anolis_carolinensis
ENSCING00000004577	-	92	44.375	ENSANAG00000023491	ARL1	88	44.444	Aotus_nancymaae
ENSCING00000004577	-	97	43.529	ENSACLG00000008188	arl1	93	43.529	Astatotilapia_calliptera
ENSCING00000004577	-	97	44.118	ENSAMXG00000021056	arl1	97	44.118	Astyanax_mexicanus
ENSCING00000004577	-	92	44.375	ENSBTAG00000011883	ARL1	88	44.444	Bos_taurus
ENSCING00000004577	-	97	38.690	WBGene00000187	arl-1	92	38.690	Caenorhabditis_elegans
ENSCING00000004577	-	95	43.976	ENSCJAG00000001966	ARL1	88	44.444	Callithrix_jacchus
ENSCING00000004577	-	92	44.375	ENSCAFG00000006992	ARL1	88	44.444	Canis_familiaris
ENSCING00000004577	-	92	44.375	ENSCAFG00020024333	ARL1	88	44.444	Canis_lupus_dingo
ENSCING00000004577	-	93	44.444	ENSCHIG00000024524	ARL1	94	44.444	Capra_hircus
ENSCING00000004577	-	93	44.720	ENSTSYG00000013257	-	89	44.444	Carlito_syrichta
ENSCING00000004577	-	80	43.885	ENSCAPG00000001010	ARL1	99	43.885	Cavia_aperea
ENSCING00000004577	-	92	44.375	ENSCPOG00000026014	ARL1	88	44.444	Cavia_porcellus
ENSCING00000004577	-	92	44.375	ENSCCAG00000025938	ARL1	88	44.444	Cebus_capucinus
ENSCING00000004577	-	92	44.375	ENSCLAG00000008180	ARL1	88	44.444	Chinchilla_lanigera
ENSCING00000004577	-	92	44.375	ENSCSAG00000003368	ARL1	88	44.444	Chlorocebus_sabaeus
ENSCING00000004577	-	93	44.444	ENSCPBG00000004906	ARL1	88	44.444	Chrysemys_picta_bellii
ENSCING00000004577	-	93	41.358	ENSCING00000019794	-	89	41.358	Ciona_intestinalis
ENSCING00000004577	-	93	41.358	ENSCSAVG00000007620	-	87	41.358	Ciona_savignyi
ENSCING00000004577	-	92	45.000	ENSCANG00000033548	ARL1	88	45.062	Colobus_angolensis_palliatus
ENSCING00000004577	-	92	44.375	ENSCGRG00001010446	Arl1	88	44.444	Cricetulus_griseus_chok1gshd
ENSCING00000004577	-	92	43.750	ENSCGRG00000009856	Arl1	80	43.827	Cricetulus_griseus_crigri
ENSCING00000004577	-	93	43.827	ENSCVAG00000001731	arl1	88	43.827	Cyprinodon_variegatus
ENSCING00000004577	-	97	44.118	ENSDARG00000101680	arl1	93	44.720	Danio_rerio
ENSCING00000004577	-	92	44.375	ENSDORG00000014770	Arl1	84	44.444	Dipodomys_ordii
ENSCING00000004577	-	94	43.293	FBgn0000115	Arl1	90	43.293	Drosophila_melanogaster
ENSCING00000004577	-	93	44.099	ENSETEG00000020310	ARL1	89	44.099	Echinops_telfairi
ENSCING00000004577	-	92	44.375	ENSEASG00005020057	ARL1	88	44.444	Equus_asinus_asinus
ENSCING00000004577	-	93	44.444	ENSECAG00000000372	ARL1	88	44.444	Equus_caballus
ENSCING00000004577	-	93	45.062	ENSELUG00000001287	-	88	45.062	Esox_lucius
ENSCING00000004577	-	93	44.444	ENSELUG00000018440	arl1	88	44.444	Esox_lucius
ENSCING00000004577	-	92	44.375	ENSFCAG00000030871	ARL1	88	44.444	Felis_catus
ENSCING00000004577	-	93	45.062	ENSFALG00000011156	ARL1	88	45.062	Ficedula_albicollis
ENSCING00000004577	-	92	43.750	ENSFDAG00000016393	ARL1	88	43.827	Fukomys_damarensis
ENSCING00000004577	-	93	43.827	ENSFHEG00000004171	arl1	85	43.827	Fundulus_heteroclitus
ENSCING00000004577	-	97	44.118	ENSGMOG00000006859	arl1	93	44.118	Gadus_morhua
ENSCING00000004577	-	93	45.062	ENSGALG00000011651	ARL1	88	45.062	Gallus_gallus
ENSCING00000004577	-	93	44.099	ENSGAFG00000006973	arl1	95	44.099	Gambusia_affinis
ENSCING00000004577	-	93	43.827	ENSGACG00000019098	arl1	88	43.827	Gasterosteus_aculeatus
ENSCING00000004577	-	92	44.375	ENSGGOG00000010788	ARL1	88	44.444	Gorilla_gorilla
ENSCING00000004577	-	97	43.529	ENSHBUG00000010636	arl1	93	43.529	Haplochromis_burtoni
ENSCING00000004577	-	92	44.375	ENSHGLG00000004909	ARL1	88	44.444	Heterocephalus_glaber_female
ENSCING00000004577	-	92	44.375	ENSHGLG00100001832	ARL1	88	44.444	Heterocephalus_glaber_male
ENSCING00000004577	-	97	44.118	ENSHCOG00000005566	arl1	93	44.118	Hippocampus_comes
ENSCING00000004577	-	97	44.118	ENSIPUG00000013834	arl1	90	44.118	Ictalurus_punctatus
ENSCING00000004577	-	92	44.375	ENSSTOG00000016022	ARL1	88	44.444	Ictidomys_tridecemlineatus
ENSCING00000004577	-	92	38.125	ENSJJAG00000000452	-	88	38.272	Jaculus_jaculus
ENSCING00000004577	-	93	43.827	ENSKMAG00000005931	arl1	86	43.827	Kryptolebias_marmoratus
ENSCING00000004577	-	97	44.118	ENSLBEG00000000991	arl1	96	44.118	Labrus_bergylta
ENSCING00000004577	-	92	44.375	ENSLAFG00000026143	ARL1	84	44.444	Loxodonta_africana
ENSCING00000004577	-	92	44.375	ENSMFAG00000035725	ARL1	88	44.444	Macaca_fascicularis
ENSCING00000004577	-	92	44.375	ENSMMUG00000031610	ARL1	88	44.444	Macaca_mulatta
ENSCING00000004577	-	92	44.375	ENSMNEG00000007067	ARL1	88	44.444	Macaca_nemestrina
ENSCING00000004577	-	90	44.586	ENSMLEG00000036143	ARL1	95	44.586	Mandrillus_leucophaeus
ENSCING00000004577	-	94	42.073	ENSMAMG00000001968	arl1	91	42.073	Mastacembelus_armatus
ENSCING00000004577	-	97	43.529	ENSMZEG00005018136	arl1	93	43.529	Maylandia_zebra
ENSCING00000004577	-	93	45.062	ENSMGAG00000011748	ARL1	88	45.062	Meleagris_gallopavo
ENSCING00000004577	-	92	44.375	ENSMAUG00000021923	Arl1	88	44.444	Mesocricetus_auratus
ENSCING00000004577	-	92	44.375	ENSMICG00000015801	ARL1	88	44.444	Microcebus_murinus
ENSCING00000004577	-	92	44.375	ENSMOCG00000005852	Arl1	88	44.444	Microtus_ochrogaster
ENSCING00000004577	-	93	44.720	ENSMMOG00000003353	arl1	63	44.720	Mola_mola
ENSCING00000004577	-	93	44.444	ENSMODG00000003056	ARL1	88	44.444	Monodelphis_domestica
ENSCING00000004577	-	91	43.396	ENSMALG00000003003	arl1	95	43.396	Monopterus_albus
ENSCING00000004577	-	92	44.375	MGP_CAROLIEiJ_G0015712	Arl1	88	44.444	Mus_caroli
ENSCING00000004577	-	92	44.375	ENSMUSG00000060904	Arl1	99	43.885	Mus_musculus
ENSCING00000004577	-	92	44.375	MGP_PahariEiJ_G0031373	Arl1	88	44.444	Mus_pahari
ENSCING00000004577	-	92	44.375	MGP_SPRETEiJ_G0016530	Arl1	88	44.444	Mus_spretus
ENSCING00000004577	-	91	44.654	ENSMPUG00000011822	ARL1	87	44.720	Mustela_putorius_furo
ENSCING00000004577	-	91	44.654	ENSMLUG00000002351	-	92	44.720	Myotis_lucifugus
ENSCING00000004577	-	91	44.025	ENSMLUG00000025321	-	88	43.827	Myotis_lucifugus
ENSCING00000004577	-	80	43.885	ENSNGAG00000007879	-	99	43.885	Nannospalax_galili
ENSCING00000004577	-	97	43.529	ENSNBRG00000019783	arl1	93	43.529	Neolamprologus_brichardi
ENSCING00000004577	-	90	44.586	ENSNLEG00000006223	ARL1	95	44.586	Nomascus_leucogenys
ENSCING00000004577	-	93	44.444	ENSMEUG00000015525	ARL1	84	44.444	Notamacropus_eugenii
ENSCING00000004577	-	90	44.231	ENSODEG00000019880	-	88	45.062	Octodon_degus
ENSCING00000004577	-	92	44.375	ENSODEG00000019783	-	88	44.444	Octodon_degus
ENSCING00000004577	-	92	44.375	ENSODEG00000010531	-	89	44.444	Octodon_degus
ENSCING00000004577	-	97	43.529	ENSONIG00000009921	arl1	93	43.529	Oreochromis_niloticus
ENSCING00000004577	-	92	44.375	ENSOCUG00000002217	ARL1	85	44.444	Oryctolagus_cuniculus
ENSCING00000004577	-	93	44.099	ENSORLG00000008909	arl1	94	44.099	Oryzias_latipes
ENSCING00000004577	-	97	43.529	ENSORLG00020005754	arl1	94	43.529	Oryzias_latipes_hni
ENSCING00000004577	-	97	43.529	ENSORLG00015002736	arl1	94	44.099	Oryzias_latipes_hsok
ENSCING00000004577	-	97	43.529	ENSOMEG00000023497	arl1	90	43.529	Oryzias_melastigma
ENSCING00000004577	-	92	43.750	ENSOGAG00000015144	ARL1	88	43.827	Otolemur_garnettii
ENSCING00000004577	-	92	44.375	ENSOARG00000015007	ARL1	88	44.444	Ovis_aries
ENSCING00000004577	-	92	44.375	ENSPPAG00000034860	ARL1	88	44.444	Pan_paniscus
ENSCING00000004577	-	92	44.375	ENSPPRG00000023908	ARL1	88	44.444	Panthera_pardus
ENSCING00000004577	-	93	44.444	ENSPTIG00000002154	-	89	44.444	Panthera_tigris_altaica
ENSCING00000004577	-	92	44.375	ENSPTRG00000005350	ARL1	88	44.444	Pan_troglodytes
ENSCING00000004577	-	97	42.857	ENSPANG00000018816	ARL1	88	42.857	Papio_anubis
ENSCING00000004577	-	97	44.118	ENSPKIG00000007118	arl1	99	44.242	Paramormyrops_kingsleyae
ENSCING00000004577	-	93	45.062	ENSPSIG00000006539	ARL1	88	45.062	Pelodiscus_sinensis
ENSCING00000004577	-	93	42.236	ENSPMGG00000004070	arl1	94	42.236	Periophthalmus_magnuspinnatus
ENSCING00000004577	-	92	44.375	ENSPEMG00000008781	Arl1	88	44.444	Peromyscus_maniculatus_bairdii
ENSCING00000004577	-	93	45.062	ENSPMAG00000002070	arl1	88	45.062	Petromyzon_marinus
ENSCING00000004577	-	93	44.444	ENSPCIG00000009683	-	86	44.444	Phascolarctos_cinereus
ENSCING00000004577	-	93	43.827	ENSPFOG00000003241	arl1	88	43.827	Poecilia_formosa
ENSCING00000004577	-	93	43.827	ENSPLAG00000012898	arl1	88	43.827	Poecilia_latipinna
ENSCING00000004577	-	93	43.827	ENSPMEG00000005938	arl1	86	43.827	Poecilia_mexicana
ENSCING00000004577	-	93	43.827	ENSPREG00000013361	arl1	86	43.827	Poecilia_reticulata
ENSCING00000004577	-	92	44.375	ENSPPYG00000004872	ARL1	88	44.444	Pongo_abelii
ENSCING00000004577	-	93	42.593	ENSPCOG00000015554	-	90	42.593	Propithecus_coquereli
ENSCING00000004577	-	92	44.375	ENSPVAG00000008119	ARL1	84	44.444	Pteropus_vampyrus
ENSCING00000004577	-	97	43.529	ENSPNYG00000011671	arl1	93	43.529	Pundamilia_nyererei
ENSCING00000004577	-	93	44.720	ENSPNAG00000028795	arl1	95	44.720	Pygocentrus_nattereri
ENSCING00000004577	-	92	44.375	ENSRNOG00000005763	Arl1	88	44.444	Rattus_norvegicus
ENSCING00000004577	-	92	44.375	ENSRBIG00000042560	ARL1	88	44.444	Rhinopithecus_bieti
ENSCING00000004577	-	92	44.375	ENSRROG00000037996	ARL1	88	44.444	Rhinopithecus_roxellana
ENSCING00000004577	-	95	43.976	ENSSBOG00000024352	-	89	44.048	Saimiri_boliviensis_boliviensis
ENSCING00000004577	-	93	44.444	ENSSHAG00000004634	ARL1	88	44.444	Sarcophilus_harrisii
ENSCING00000004577	-	97	44.118	ENSSFOG00015001665	arl1	93	44.118	Scleropages_formosus
ENSCING00000004577	-	97	42.941	ENSSMAG00000016416	arl1	93	42.941	Scophthalmus_maximus
ENSCING00000004577	-	93	44.099	ENSSDUG00000013898	arl1	90	44.099	Seriola_dumerili
ENSCING00000004577	-	97	43.529	ENSSLDG00000012946	arl1	93	43.529	Seriola_lalandi_dorsalis
ENSCING00000004577	-	93	44.720	ENSSARG00000013944	ARL1	89	44.720	Sorex_araneus
ENSCING00000004577	-	93	45.062	ENSSPUG00000004578	ARL1	88	45.062	Sphenodon_punctatus
ENSCING00000004577	-	97	43.529	ENSSPAG00000014633	arl1	93	43.529	Stegastes_partitus
ENSCING00000004577	-	92	44.375	ENSSSCG00000000870	ARL1	88	44.444	Sus_scrofa
ENSCING00000004577	-	93	45.062	ENSTGUG00000009085	-	89	45.062	Taeniopygia_guttata
ENSCING00000004577	-	97	44.118	ENSTRUG00000006254	arl1	93	44.118	Takifugu_rubripes
ENSCING00000004577	-	97	44.118	ENSTNIG00000006920	arl1	92	44.118	Tetraodon_nigroviridis
ENSCING00000004577	-	91	44.654	ENSTBEG00000015546	ARL1	87	44.720	Tupaia_belangeri
ENSCING00000004577	-	92	44.375	ENSTTRG00000017202	ARL1	84	44.444	Tursiops_truncatus
ENSCING00000004577	-	93	44.720	ENSUMAG00000019547	ARL1	88	44.444	Ursus_maritimus
ENSCING00000004577	-	92	44.375	ENSVPAG00000011621	ARL1	84	44.444	Vicugna_pacos
ENSCING00000004577	-	93	44.720	ENSVVUG00000018044	ARL1	88	44.444	Vulpes_vulpes
ENSCING00000004577	-	95	44.643	ENSXETG00000002540	arl1	93	44.706	Xenopus_tropicalis
ENSCING00000004577	-	95	43.636	ENSXMAG00000028338	arl1	92	44.961	Xiphophorus_maculatus