EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000004580 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: vigilin
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 10324 bases
Position: chr1:3957879-3968202
Accession: 100176627
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000009467	KH_1	PF00013.29	6.2e-169	1	14
ENSCINP00000009467	KH_1	PF00013.29	6.2e-169	2	14
ENSCINP00000009467	KH_1	PF00013.29	6.2e-169	3	14
ENSCINP00000009467	KH_1	PF00013.29	6.2e-169	4	14
ENSCINP00000009467	KH_1	PF00013.29	6.2e-169	5	14
ENSCINP00000009467	KH_1	PF00013.29	6.2e-169	6	14
ENSCINP00000009467	KH_1	PF00013.29	6.2e-169	7	14
ENSCINP00000009467	KH_1	PF00013.29	6.2e-169	8	14
ENSCINP00000009467	KH_1	PF00013.29	6.2e-169	9	14
ENSCINP00000009467	KH_1	PF00013.29	6.2e-169	10	14
ENSCINP00000009467	KH_1	PF00013.29	6.2e-169	11	14
ENSCINP00000009467	KH_1	PF00013.29	6.2e-169	12	14
ENSCINP00000009467	KH_1	PF00013.29	6.2e-169	13	14
ENSCINP00000009467	KH_1	PF00013.29	6.2e-169	14	14

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000009467	-	4144	-	ENSCINP00000009467	1243 (aa)	XP_009862220	A0A1W3JV04

Gene Model

Click here to download ENSCING00000004580's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000004580's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000004580	-	97	38.806	WBGene00007463	vgln-1	98	38.794	Caenorhabditis_elegans
ENSCING00000004580	-	95	88.258	ENSCSAVG00000009989	-	100	88.258	Ciona_savignyi
ENSCING00000004580	-	98	41.587	FBgn0027835	Dp1	97	41.274	Drosophila_melanogaster