EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000004583 (Gene tree)
Gene ID: 100175982
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 933 bases
Position: chr1:6712990-6713922
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000009461	DcpS	PF05652.12	1.2e-17	1	1
ENSCINP00000009461	DcpS_C	PF11969.8	5.5e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000009461	-	933	-	ENSCINP00000009461	310 (aa)	-	F6WQE3

Gene Model

Click here to download ENSCING00000004583's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000004583's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000004583	-	99	43.506	ENSG00000110063	DCPS	90	43.506	Homo_sapiens
ENSCING00000004583	-	99	46.104	ENSAPOG00000013927	dcps	82	46.104	Acanthochromis_polyacanthus
ENSCING00000004583	-	99	44.156	ENSAMEG00000000111	DCPS	90	44.156	Ailuropoda_melanoleuca
ENSCING00000004583	-	96	46.801	ENSACIG00000022830	dcps	91	46.801	Amphilophus_citrinellus
ENSCING00000004583	-	99	47.078	ENSAOCG00000011512	dcps	91	47.078	Amphiprion_ocellaris
ENSCING00000004583	-	99	47.078	ENSAPEG00000015231	dcps	91	47.078	Amphiprion_percula
ENSCING00000004583	-	96	46.465	ENSATEG00000017854	-	86	46.465	Anabas_testudineus
ENSCING00000004583	-	82	49.802	ENSAPLG00000002407	DCPS	93	49.802	Anas_platyrhynchos
ENSCING00000004583	-	85	45.660	ENSACAG00000000101	DCPS	98	45.660	Anolis_carolinensis
ENSCING00000004583	-	83	35.385	ENSANAG00000035483	-	84	35.385	Aotus_nancymaae
ENSCING00000004583	-	99	43.831	ENSANAG00000021856	-	82	43.831	Aotus_nancymaae
ENSCING00000004583	-	99	46.580	ENSACLG00000021703	dcps	89	46.580	Astatotilapia_calliptera
ENSCING00000004583	-	99	45.752	ENSAMXG00000037686	dcps	92	45.752	Astyanax_mexicanus
ENSCING00000004583	-	99	43.506	ENSBTAG00000002879	DCPS	90	43.506	Bos_taurus
ENSCING00000004583	-	97	34.539	WBGene00000940	dcs-1	97	38.947	Caenorhabditis_elegans
ENSCING00000004583	-	96	44.482	ENSCJAG00000008896	DCPS	88	44.482	Callithrix_jacchus
ENSCING00000004583	-	99	44.156	ENSCAFG00000010421	DCPS	84	43.831	Canis_familiaris
ENSCING00000004583	-	99	44.156	ENSCAFG00020010596	DCPS	91	44.156	Canis_lupus_dingo
ENSCING00000004583	-	99	43.831	ENSCHIG00000023271	DCPS	90	43.831	Capra_hircus
ENSCING00000004583	-	95	44.595	ENSTSYG00000006959	DCPS	88	44.482	Carlito_syrichta
ENSCING00000004583	-	89	44.000	ENSCAPG00000016263	DCPS	98	44.000	Cavia_aperea
ENSCING00000004583	-	99	42.997	ENSCPOG00000014358	DCPS	90	42.997	Cavia_porcellus
ENSCING00000004583	-	99	44.156	ENSCCAG00000030779	DCPS	86	44.156	Cebus_capucinus
ENSCING00000004583	-	100	43.548	ENSCATG00000006118	DCPS	90	43.548	Cercocebus_atys
ENSCING00000004583	-	99	43.322	ENSCLAG00000015708	DCPS	89	43.322	Chinchilla_lanigera
ENSCING00000004583	-	100	43.548	ENSCSAG00000002256	DCPS	90	43.548	Chlorocebus_sabaeus
ENSCING00000004583	-	55	40.909	ENSCHOG00000007561	-	51	40.909	Choloepus_hoffmanni
ENSCING00000004583	-	89	48.364	ENSCPBG00000011119	DCPS	91	48.364	Chrysemys_picta_bellii
ENSCING00000004583	-	98	66.885	ENSCSAVG00000010841	-	92	66.885	Ciona_savignyi
ENSCING00000004583	-	100	43.871	ENSCANG00000031834	DCPS	90	43.871	Colobus_angolensis_palliatus
ENSCING00000004583	-	96	44.816	ENSCGRG00001022394	Dcps	87	44.816	Cricetulus_griseus_chok1gshd
ENSCING00000004583	-	96	44.816	ENSCGRG00000010900	Dcps	87	44.816	Cricetulus_griseus_crigri
ENSCING00000004583	-	99	45.277	ENSCSEG00000016877	dcps	90	45.277	Cynoglossus_semilaevis
ENSCING00000004583	-	96	40.667	ENSCSEG00000016894	-	86	40.667	Cynoglossus_semilaevis
ENSCING00000004583	-	99	43.974	ENSCVAG00000011377	dcps	88	45.956	Cyprinodon_variegatus
ENSCING00000004583	-	99	45.603	ENSDARG00000009862	dcps	92	45.603	Danio_rerio
ENSCING00000004583	-	99	44.481	ENSDNOG00000003974	DCPS	90	44.481	Dasypus_novemcinctus
ENSCING00000004583	-	96	44.816	ENSDORG00000000696	Dcps	88	44.816	Dipodomys_ordii
ENSCING00000004583	-	93	41.667	FBgn0037372	CG2091	78	41.667	Drosophila_melanogaster
ENSCING00000004583	-	85	47.368	ENSEBUG00000003242	dcps	99	47.368	Eptatretus_burgeri
ENSCING00000004583	-	99	45.130	ENSEASG00005022977	DCPS	90	45.130	Equus_asinus_asinus
ENSCING00000004583	-	99	45.455	ENSECAG00000012956	DCPS	90	45.455	Equus_caballus
ENSCING00000004583	-	99	45.455	ENSEEUG00000008046	DCPS	90	45.455	Erinaceus_europaeus
ENSCING00000004583	-	99	45.603	ENSELUG00000019902	dcps	89	45.603	Esox_lucius
ENSCING00000004583	-	99	43.182	ENSFCAG00000030687	DCPS	90	43.182	Felis_catus
ENSCING00000004583	-	90	47.122	ENSFALG00000005007	DCPS	99	47.122	Ficedula_albicollis
ENSCING00000004583	-	99	42.345	ENSFDAG00000020518	DCPS	89	42.345	Fukomys_damarensis
ENSCING00000004583	-	99	43.648	ENSFHEG00000021972	dcps	89	43.648	Fundulus_heteroclitus
ENSCING00000004583	-	98	46.557	ENSGMOG00000006034	dcps	95	46.557	Gadus_morhua
ENSCING00000004583	-	75	51.931	ENSGALG00000031143	DCPS	99	51.931	Gallus_gallus
ENSCING00000004583	-	99	43.974	ENSGAFG00000015532	dcps	89	43.974	Gambusia_affinis
ENSCING00000004583	-	96	46.128	ENSGACG00000018734	dcps	89	45.098	Gasterosteus_aculeatus
ENSCING00000004583	-	94	47.931	ENSGAGG00000006184	DCPS	86	47.931	Gopherus_agassizii
ENSCING00000004583	-	82	41.732	ENSGGOG00000005028	DCPS	85	41.732	Gorilla_gorilla
ENSCING00000004583	-	99	46.254	ENSHBUG00000012352	dcps	89	46.254	Haplochromis_burtoni
ENSCING00000004583	-	99	43.322	ENSHGLG00000005259	DCPS	90	43.322	Heterocephalus_glaber_female
ENSCING00000004583	-	99	43.042	ENSHGLG00100012366	DCPS	90	43.042	Heterocephalus_glaber_male
ENSCING00000004583	-	97	48.013	ENSHCOG00000004819	dcps	88	48.013	Hippocampus_comes
ENSCING00000004583	-	99	47.231	ENSIPUG00000020491	dcps	91	47.231	Ictalurus_punctatus
ENSCING00000004583	-	99	42.997	ENSSTOG00000009930	DCPS	90	42.997	Ictidomys_tridecemlineatus
ENSCING00000004583	-	99	44.156	ENSJJAG00000020913	Dcps	90	44.156	Jaculus_jaculus
ENSCING00000004583	-	96	45.118	ENSKMAG00000006439	dcps	86	45.118	Kryptolebias_marmoratus
ENSCING00000004583	-	85	46.947	ENSLBEG00000014244	dcps	86	46.947	Labrus_bergylta
ENSCING00000004583	-	55	48.521	ENSLACG00000002085	DCPS	97	48.521	Latimeria_chalumnae
ENSCING00000004583	-	99	44.805	ENSLAFG00000006052	DCPS	90	44.805	Loxodonta_africana
ENSCING00000004583	-	100	43.548	ENSMFAG00000018709	DCPS	90	43.548	Macaca_fascicularis
ENSCING00000004583	-	100	43.871	ENSMMUG00000007950	DCPS	90	43.871	Macaca_mulatta
ENSCING00000004583	-	100	43.548	ENSMNEG00000029735	DCPS	90	43.548	Macaca_nemestrina
ENSCING00000004583	-	100	43.548	ENSMLEG00000028091	DCPS	90	43.548	Mandrillus_leucophaeus
ENSCING00000004583	-	98	45.875	ENSMAMG00000000698	dcps	84	45.875	Mastacembelus_armatus
ENSCING00000004583	-	99	46.580	ENSMZEG00005005552	dcps	89	46.580	Maylandia_zebra
ENSCING00000004583	-	69	50.233	ENSMGAG00000000755	DCPS	99	50.233	Meleagris_gallopavo
ENSCING00000004583	-	95	44.595	ENSMAUG00000011332	Dcps	88	43.648	Mesocricetus_auratus
ENSCING00000004583	-	99	42.208	ENSMICG00000014834	DCPS	90	42.208	Microcebus_murinus
ENSCING00000004583	-	96	44.816	ENSMOCG00000006978	Dcps	87	44.816	Microtus_ochrogaster
ENSCING00000004583	-	99	45.806	ENSMMOG00000010000	dcps	91	45.806	Mola_mola
ENSCING00000004583	-	99	45.603	ENSMODG00000004617	DCPS	90	45.603	Monodelphis_domestica
ENSCING00000004583	-	99	47.115	ENSMALG00000012274	dcps	80	47.115	Monopterus_albus
ENSCING00000004583	-	95	44.595	MGP_CAROLIEiJ_G0031949	Dcps	91	43.871	Mus_caroli
ENSCING00000004583	-	95	44.595	ENSMUSG00000032040	Dcps	91	43.871	Mus_musculus
ENSCING00000004583	-	95	44.595	MGP_PahariEiJ_G0014814	Dcps	91	43.871	Mus_pahari
ENSCING00000004583	-	95	44.595	MGP_SPRETEiJ_G0033073	Dcps	91	43.871	Mus_spretus
ENSCING00000004583	-	99	44.839	ENSMPUG00000006653	DCPS	90	44.839	Mustela_putorius_furo
ENSCING00000004583	-	99	43.506	ENSMLUG00000017342	DCPS	89	43.506	Myotis_lucifugus
ENSCING00000004583	-	98	44.079	ENSNGAG00000011482	Dcps	90	44.482	Nannospalax_galili
ENSCING00000004583	-	99	45.928	ENSNBRG00000022078	dcps	89	45.928	Neolamprologus_brichardi
ENSCING00000004583	-	99	43.506	ENSNLEG00000033119	DCPS	90	43.506	Nomascus_leucogenys
ENSCING00000004583	-	99	46.104	ENSMEUG00000010896	DCPS	90	46.104	Notamacropus_eugenii
ENSCING00000004583	-	88	44.322	ENSOPRG00000013199	DCPS	99	44.322	Ochotona_princeps
ENSCING00000004583	-	99	42.071	ENSODEG00000003139	DCPS	88	42.071	Octodon_degus
ENSCING00000004583	-	99	45.603	ENSONIG00000015808	dcps	88	45.603	Oreochromis_niloticus
ENSCING00000004583	-	99	43.831	ENSOCUG00000012520	-	90	43.831	Oryctolagus_cuniculus
ENSCING00000004583	-	99	43.831	ENSOCUG00000029302	-	90	43.831	Oryctolagus_cuniculus
ENSCING00000004583	-	96	45.118	ENSORLG00000009177	dcps	86	45.118	Oryzias_latipes
ENSCING00000004583	-	96	45.118	ENSORLG00020020148	dcps	86	45.118	Oryzias_latipes_hni
ENSCING00000004583	-	96	44.444	ENSORLG00015015209	dcps	86	44.444	Oryzias_latipes_hsok
ENSCING00000004583	-	96	44.444	ENSOMEG00000017125	dcps	86	44.444	Oryzias_melastigma
ENSCING00000004583	-	100	44.516	ENSOGAG00000008937	DCPS	90	44.516	Otolemur_garnettii
ENSCING00000004583	-	99	43.730	ENSOARG00000012785	DCPS	90	43.730	Ovis_aries
ENSCING00000004583	-	99	43.182	ENSPPAG00000031830	DCPS	90	43.182	Pan_paniscus
ENSCING00000004583	-	99	43.506	ENSPPRG00000023157	DCPS	90	43.506	Panthera_pardus
ENSCING00000004583	-	99	43.506	ENSPTIG00000021939	DCPS	90	43.506	Panthera_tigris_altaica
ENSCING00000004583	-	99	43.182	ENSPTRG00000004459	DCPS	90	43.182	Pan_troglodytes
ENSCING00000004583	-	96	38.926	ENSPANG00000010632	DCPS	88	38.926	Papio_anubis
ENSCING00000004583	-	99	44.300	ENSPKIG00000005714	dcps	90	44.300	Paramormyrops_kingsleyae
ENSCING00000004583	-	85	49.242	ENSPSIG00000014678	DCPS	97	49.242	Pelodiscus_sinensis
ENSCING00000004583	-	96	45.118	ENSPMGG00000004946	dcps	85	45.118	Periophthalmus_magnuspinnatus
ENSCING00000004583	-	91	41.281	ENSPEMG00000009396	-	84	41.281	Peromyscus_maniculatus_bairdii
ENSCING00000004583	-	96	44.816	ENSPEMG00000016481	-	88	44.816	Peromyscus_maniculatus_bairdii
ENSCING00000004583	-	71	46.119	ENSPCIG00000010203	DCPS	63	46.119	Phascolarctos_cinereus
ENSCING00000004583	-	96	44.781	ENSPFOG00000004892	dcps	86	44.781	Poecilia_formosa
ENSCING00000004583	-	96	44.781	ENSPLAG00000004963	dcps	86	44.781	Poecilia_latipinna
ENSCING00000004583	-	96	45.118	ENSPMEG00000005609	dcps	86	45.118	Poecilia_mexicana
ENSCING00000004583	-	96	45.118	ENSPREG00000003444	dcps	86	45.118	Poecilia_reticulata
ENSCING00000004583	-	99	43.506	ENSPPYG00000004048	DCPS	90	43.506	Pongo_abelii
ENSCING00000004583	-	85	46.415	ENSPCAG00000010891	DCPS	77	46.415	Procavia_capensis
ENSCING00000004583	-	99	42.208	ENSPCOG00000004926	DCPS	90	42.208	Propithecus_coquereli
ENSCING00000004583	-	99	43.648	ENSPVAG00000000997	DCPS	89	43.648	Pteropus_vampyrus
ENSCING00000004583	-	99	46.254	ENSPNYG00000000048	dcps	89	46.254	Pundamilia_nyererei
ENSCING00000004583	-	96	47.811	ENSPNAG00000008535	dcps	88	47.811	Pygocentrus_nattereri
ENSCING00000004583	-	95	44.257	ENSRNOG00000009993	Dcps	90	43.648	Rattus_norvegicus
ENSCING00000004583	-	100	43.871	ENSRBIG00000044049	DCPS	90	43.871	Rhinopithecus_bieti
ENSCING00000004583	-	100	43.871	ENSRROG00000033864	DCPS	90	43.871	Rhinopithecus_roxellana
ENSCING00000004583	-	66	40.000	YLR270W	DCS1	60	40.000	Saccharomyces_cerevisiae
ENSCING00000004583	-	66	40.930	YOR173W	-	60	40.930	Saccharomyces_cerevisiae
ENSCING00000004583	-	95	31.525	ENSSBOG00000034164	-	84	31.525	Saimiri_boliviensis_boliviensis
ENSCING00000004583	-	89	44.364	ENSSBOG00000021447	-	99	44.364	Saimiri_boliviensis_boliviensis
ENSCING00000004583	-	99	45.779	ENSSHAG00000002250	DCPS	89	45.779	Sarcophilus_harrisii
ENSCING00000004583	-	97	45.847	ENSSFOG00015022277	dcps	86	45.847	Scleropages_formosus
ENSCING00000004583	-	98	47.541	ENSSMAG00000013606	dcps	87	47.541	Scophthalmus_maximus
ENSCING00000004583	-	99	46.732	ENSSDUG00000013850	dcps	89	46.732	Seriola_dumerili
ENSCING00000004583	-	99	46.405	ENSSLDG00000022373	dcps	89	46.405	Seriola_lalandi_dorsalis
ENSCING00000004583	-	71	43.836	ENSSARG00000000265	DCPS	86	43.836	Sorex_araneus
ENSCING00000004583	-	99	45.455	ENSSPUG00000000168	DCPS	92	45.455	Sphenodon_punctatus
ENSCING00000004583	-	96	47.811	ENSSPAG00000003336	dcps	93	48.630	Stegastes_partitus
ENSCING00000004583	-	99	44.156	ENSSSCG00000015231	DCPS	90	44.156	Sus_scrofa
ENSCING00000004583	-	85	48.092	ENSTGUG00000000833	-	96	48.092	Taeniopygia_guttata
ENSCING00000004583	-	53	50.307	ENSTGUG00000014634	-	99	50.307	Taeniopygia_guttata
ENSCING00000004583	-	98	46.557	ENSTRUG00000024323	dcps	89	46.557	Takifugu_rubripes
ENSCING00000004583	-	98	44.737	ENSTNIG00000005833	dcps	98	47.059	Tetraodon_nigroviridis
ENSCING00000004583	-	68	45.082	ENSTTRG00000001560	DCPS	62	45.082	Tursiops_truncatus
ENSCING00000004583	-	97	43.522	ENSUAMG00000005517	DCPS	98	43.522	Ursus_americanus
ENSCING00000004583	-	99	43.831	ENSUMAG00000002520	DCPS	90	43.831	Ursus_maritimus
ENSCING00000004583	-	72	43.182	ENSVPAG00000001086	DCPS	67	43.182	Vicugna_pacos
ENSCING00000004583	-	99	44.156	ENSVVUG00000020085	DCPS	78	43.831	Vulpes_vulpes
ENSCING00000004583	-	97	45.902	ENSXETG00000017917	dcps	92	45.902	Xenopus_tropicalis
ENSCING00000004583	-	99	43.730	ENSXMAG00000021614	dcps	91	43.730	Xiphophorus_maculatus