EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000004639 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 10004 bases
Position: chr9:1470397-1480400
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000009625	IBN_N	PF03810.19	1.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000009625	-	2701	-	ENSCINP00000009625	883 (aa)	-	F6RMU1

Gene Model

Click here to download ENSCING00000004639's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000004639's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000004639	-	99	64.424	ENSG00000108424	KPNB1	100	66.667	Homo_sapiens
ENSCING00000004639	-	99	65.222	ENSAPOG00000020572	kpnb1	99	65.222	Acanthochromis_polyacanthus
ENSCING00000004639	-	95	65.083	ENSAMEG00000004613	KPNB1	99	65.083	Ailuropoda_melanoleuca
ENSCING00000004639	-	97	65.228	ENSACIG00000023130	kpnb1	99	65.228	Amphilophus_citrinellus
ENSCING00000004639	-	99	65.222	ENSAOCG00000007048	kpnb1	99	65.222	Amphiprion_ocellaris
ENSCING00000004639	-	99	65.222	ENSAPEG00000008270	kpnb1	99	65.222	Amphiprion_percula
ENSCING00000004639	-	99	64.880	ENSATEG00000015139	kpnb1	99	64.880	Anabas_testudineus
ENSCING00000004639	-	95	64.929	ENSAPLG00000010177	KPNB1	96	64.929	Anas_platyrhynchos
ENSCING00000004639	-	99	65.222	ENSACAG00000007097	KPNB1	99	65.222	Anolis_carolinensis
ENSCING00000004639	-	99	62.486	ENSANAG00000024932	-	99	62.486	Aotus_nancymaae
ENSCING00000004639	-	99	64.994	ENSACLG00000015070	kpnb1	99	64.994	Astatotilapia_calliptera
ENSCING00000004639	-	99	65.450	ENSAMXG00000041903	kpnb1	99	65.450	Astyanax_mexicanus
ENSCING00000004639	-	99	64.538	ENSBTAG00000006586	KPNB1	99	64.538	Bos_taurus
ENSCING00000004639	-	99	43.146	WBGene00002075	imb-1	99	43.161	Caenorhabditis_elegans
ENSCING00000004639	-	99	64.424	ENSCJAG00000007834	KPNB1	99	64.424	Callithrix_jacchus
ENSCING00000004639	-	99	64.538	ENSCAFG00000016678	KPNB1	99	64.538	Canis_familiaris
ENSCING00000004639	-	99	64.538	ENSCAFG00020023205	KPNB1	99	64.538	Canis_lupus_dingo
ENSCING00000004639	-	99	64.538	ENSCHIG00000014896	KPNB1	99	64.538	Capra_hircus
ENSCING00000004639	-	99	63.056	ENSTSYG00000014472	KPNB1	99	63.056	Carlito_syrichta
ENSCING00000004639	-	95	64.964	ENSCAPG00000014185	KPNB1	99	64.964	Cavia_aperea
ENSCING00000004639	-	99	64.538	ENSCPOG00000006566	KPNB1	99	64.538	Cavia_porcellus
ENSCING00000004639	-	98	55.678	ENSCCAG00000018551	-	99	49.024	Cebus_capucinus
ENSCING00000004639	-	99	60.205	ENSCCAG00000029263	-	99	60.205	Cebus_capucinus
ENSCING00000004639	-	99	64.424	ENSCATG00000037124	KPNB1	99	64.424	Cercocebus_atys
ENSCING00000004639	-	99	64.424	ENSCLAG00000017091	KPNB1	99	64.424	Chinchilla_lanigera
ENSCING00000004639	-	99	64.424	ENSCSAG00000002605	KPNB1	99	64.424	Chlorocebus_sabaeus
ENSCING00000004639	-	70	75.862	ENSCHOG00000010604	KPNB1	70	75.862	Choloepus_hoffmanni
ENSCING00000004639	-	98	64.937	ENSCPBG00000027423	KPNB1	94	64.937	Chrysemys_picta_bellii
ENSCING00000004639	-	99	78.677	ENSCSAVG00000008624	-	99	78.677	Ciona_savignyi
ENSCING00000004639	-	77	64.140	ENSCANG00000013489	KPNB1	90	64.140	Colobus_angolensis_palliatus
ENSCING00000004639	-	99	64.538	ENSCGRG00001016042	Kpnb1	99	64.538	Cricetulus_griseus_chok1gshd
ENSCING00000004639	-	95	64.964	ENSCGRG00000013910	Kpnb1	99	64.964	Cricetulus_griseus_crigri
ENSCING00000004639	-	96	65.064	ENSCSEG00000007991	kpnb1	99	65.269	Cynoglossus_semilaevis
ENSCING00000004639	-	99	65.564	ENSDARG00000104889	kpnb1	99	65.564	Danio_rerio
ENSCING00000004639	-	99	54.949	FBgn0262743	Fs(2)Ket	98	54.949	Drosophila_melanogaster
ENSCING00000004639	-	98	63.783	ENSEBUG00000013869	kpnb1	98	63.783	Eptatretus_burgeri
ENSCING00000004639	-	99	64.538	ENSEASG00005000805	KPNB1	99	64.538	Equus_asinus_asinus
ENSCING00000004639	-	99	64.538	ENSECAG00000014560	KPNB1	99	64.538	Equus_caballus
ENSCING00000004639	-	84	61.929	ENSEEUG00000005046	KPNB1	88	61.929	Erinaceus_europaeus
ENSCING00000004639	-	99	65.222	ENSELUG00000015847	kpnb1	99	65.222	Esox_lucius
ENSCING00000004639	-	99	64.538	ENSFCAG00000023994	KPNB1	99	64.538	Felis_catus
ENSCING00000004639	-	95	65.083	ENSFDAG00000019923	KPNB1	99	65.083	Fukomys_damarensis
ENSCING00000004639	-	99	64.880	ENSFHEG00000020199	kpnb1	99	64.880	Fundulus_heteroclitus
ENSCING00000004639	-	99	61.345	ENSGMOG00000011607	kpnb1	99	61.345	Gadus_morhua
ENSCING00000004639	-	99	64.310	ENSGALG00000036962	KPNB1	99	64.310	Gallus_gallus
ENSCING00000004639	-	99	64.880	ENSGAFG00000000783	kpnb1	99	64.880	Gambusia_affinis
ENSCING00000004639	-	99	62.089	ENSGACG00000014765	kpnb1	99	62.089	Gasterosteus_aculeatus
ENSCING00000004639	-	95	65.321	ENSGAGG00000023737	KPNB1	92	65.321	Gopherus_agassizii
ENSCING00000004639	-	99	64.424	ENSGGOG00000008089	KPNB1	99	64.424	Gorilla_gorilla
ENSCING00000004639	-	99	64.994	ENSHBUG00000016826	kpnb1	99	64.994	Haplochromis_burtoni
ENSCING00000004639	-	99	64.652	ENSHGLG00000014138	KPNB1	99	64.652	Heterocephalus_glaber_female
ENSCING00000004639	-	95	65.083	ENSHGLG00100006572	KPNB1	99	65.083	Heterocephalus_glaber_male
ENSCING00000004639	-	99	63.398	ENSHCOG00000002084	kpnb1	99	63.398	Hippocampus_comes
ENSCING00000004639	-	98	61.822	ENSIPUG00000012402	kpnb1	95	61.822	Ictalurus_punctatus
ENSCING00000004639	-	99	64.424	ENSSTOG00000007896	KPNB1	99	64.424	Ictidomys_tridecemlineatus
ENSCING00000004639	-	99	64.196	ENSJJAG00000010909	Kpnb1	99	64.196	Jaculus_jaculus
ENSCING00000004639	-	99	64.766	ENSKMAG00000001547	kpnb1	99	64.766	Kryptolebias_marmoratus
ENSCING00000004639	-	99	64.376	ENSLBEG00000025794	kpnb1	98	64.260	Labrus_bergylta
ENSCING00000004639	-	87	66.925	ENSLACG00000017620	KPNB1	99	66.925	Latimeria_chalumnae
ENSCING00000004639	-	99	65.108	ENSLOCG00000013753	kpnb1	99	65.792	Lepisosteus_oculatus
ENSCING00000004639	-	99	61.433	ENSLAFG00000001328	KPNB1	99	61.433	Loxodonta_africana
ENSCING00000004639	-	95	64.846	ENSMFAG00000030197	KPNB1	99	64.846	Macaca_fascicularis
ENSCING00000004639	-	98	63.783	ENSMMUG00000019760	KPNB1	99	63.783	Macaca_mulatta
ENSCING00000004639	-	99	64.424	ENSMNEG00000040927	KPNB1	99	64.424	Macaca_nemestrina
ENSCING00000004639	-	95	64.846	ENSMLEG00000038185	KPNB1	96	64.846	Mandrillus_leucophaeus
ENSCING00000004639	-	99	65.108	ENSMAMG00000011036	kpnb1	99	65.108	Mastacembelus_armatus
ENSCING00000004639	-	99	64.994	ENSMZEG00005004564	kpnb1	99	64.994	Maylandia_zebra
ENSCING00000004639	-	54	64.449	ENSMGAG00000002770	-	99	64.449	Meleagris_gallopavo
ENSCING00000004639	-	99	64.538	ENSMAUG00000006211	Kpnb1	99	64.538	Mesocricetus_auratus
ENSCING00000004639	-	99	64.424	ENSMICG00000012059	KPNB1	84	64.424	Microcebus_murinus
ENSCING00000004639	-	99	64.538	ENSMOCG00000003683	Kpnb1	99	64.538	Microtus_ochrogaster
ENSCING00000004639	-	99	64.994	ENSMODG00000012505	KPNB1	99	64.994	Monodelphis_domestica
ENSCING00000004639	-	99	64.880	ENSMALG00000000863	kpnb1	99	64.880	Monopterus_albus
ENSCING00000004639	-	93	65.617	MGP_CAROLIEiJ_G0017050	Kpnb1	100	65.617	Mus_caroli
ENSCING00000004639	-	99	64.538	ENSMUSG00000001440	Kpnb1	99	64.538	Mus_musculus
ENSCING00000004639	-	99	64.196	ENSMPUG00000015220	KPNB1	99	64.196	Mustela_putorius_furo
ENSCING00000004639	-	99	61.092	ENSMLUG00000014522	KPNB1	99	61.092	Myotis_lucifugus
ENSCING00000004639	-	98	63.626	ENSNGAG00000017610	Kpnb1	99	64.727	Nannospalax_galili
ENSCING00000004639	-	99	64.994	ENSNBRG00000019305	kpnb1	99	64.994	Neolamprologus_brichardi
ENSCING00000004639	-	99	64.424	ENSNLEG00000001446	KPNB1	99	64.424	Nomascus_leucogenys
ENSCING00000004639	-	99	61.231	ENSMEUG00000014284	KPNB1	99	61.231	Notamacropus_eugenii
ENSCING00000004639	-	99	64.424	ENSODEG00000017287	KPNB1	99	64.424	Octodon_degus
ENSCING00000004639	-	99	64.994	ENSONIG00000009269	kpnb1	99	64.994	Oreochromis_niloticus
ENSCING00000004639	-	99	64.538	ENSOCUG00000015425	KPNB1	99	64.538	Oryctolagus_cuniculus
ENSCING00000004639	-	99	64.766	ENSORLG00000019936	kpnb1	99	64.766	Oryzias_latipes
ENSCING00000004639	-	99	64.766	ENSORLG00020021181	kpnb1	99	64.766	Oryzias_latipes_hni
ENSCING00000004639	-	99	64.652	ENSORLG00015012177	kpnb1	99	64.652	Oryzias_latipes_hsok
ENSCING00000004639	-	99	64.880	ENSOMEG00000021022	kpnb1	99	64.880	Oryzias_melastigma
ENSCING00000004639	-	99	64.424	ENSOGAG00000006153	KPNB1	99	64.424	Otolemur_garnettii
ENSCING00000004639	-	95	65.083	ENSOARG00000008469	KPNB1	97	65.083	Ovis_aries
ENSCING00000004639	-	99	64.424	ENSPPAG00000028842	KPNB1	99	64.424	Pan_paniscus
ENSCING00000004639	-	95	64.964	ENSPPRG00000022879	KPNB1	96	64.964	Panthera_pardus
ENSCING00000004639	-	95	64.964	ENSPTIG00000006870	KPNB1	96	64.964	Panthera_tigris_altaica
ENSCING00000004639	-	99	64.424	ENSPTRG00000009333	KPNB1	99	64.424	Pan_troglodytes
ENSCING00000004639	-	99	64.424	ENSPANG00000022099	KPNB1	99	64.424	Papio_anubis
ENSCING00000004639	-	99	65.678	ENSPKIG00000017563	kpnb1	99	65.678	Paramormyrops_kingsleyae
ENSCING00000004639	-	95	65.677	ENSPSIG00000009775	KPNB1	99	65.677	Pelodiscus_sinensis
ENSCING00000004639	-	99	63.348	ENSPMGG00000001041	kpnb1	92	63.729	Periophthalmus_magnuspinnatus
ENSCING00000004639	-	99	64.538	ENSPEMG00000017783	Kpnb1	99	64.538	Peromyscus_maniculatus_bairdii
ENSCING00000004639	-	99	63.636	ENSPMAG00000007117	kpnb1	99	63.636	Petromyzon_marinus
ENSCING00000004639	-	99	64.880	ENSPCIG00000001034	KPNB1	99	64.880	Phascolarctos_cinereus
ENSCING00000004639	-	99	64.880	ENSPFOG00000009014	kpnb1	99	64.880	Poecilia_formosa
ENSCING00000004639	-	99	64.880	ENSPLAG00000010922	kpnb1	99	64.880	Poecilia_latipinna
ENSCING00000004639	-	99	64.880	ENSPREG00000012268	kpnb1	99	64.880	Poecilia_reticulata
ENSCING00000004639	-	99	64.082	ENSPPYG00000025935	KPNB1	99	64.082	Pongo_abelii
ENSCING00000004639	-	75	55.369	ENSPCAG00000002526	KPNB1	77	55.369	Procavia_capensis
ENSCING00000004639	-	99	64.424	ENSPCOG00000026259	KPNB1	99	64.424	Propithecus_coquereli
ENSCING00000004639	-	99	64.082	ENSPVAG00000004910	KPNB1	99	64.082	Pteropus_vampyrus
ENSCING00000004639	-	99	62.268	ENSPNYG00000017703	kpnb1	96	66.709	Pundamilia_nyererei
ENSCING00000004639	-	99	59.611	ENSPNAG00000024047	kpnb1	98	59.611	Pygocentrus_nattereri
ENSCING00000004639	-	99	64.538	ENSRNOG00000009275	Kpnb1	99	64.538	Rattus_norvegicus
ENSCING00000004639	-	99	64.310	ENSRBIG00000002254	KPNB1	99	64.310	Rhinopithecus_bieti
ENSCING00000004639	-	98	64.129	ENSRROG00000030419	KPNB1	99	64.129	Rhinopithecus_roxellana
ENSCING00000004639	-	99	32.619	YLR347C	KAP95	99	32.619	Saccharomyces_cerevisiae
ENSCING00000004639	-	99	64.424	ENSSBOG00000030025	KPNB1	94	64.424	Saimiri_boliviensis_boliviensis
ENSCING00000004639	-	95	65.248	ENSSHAG00000018214	KPNB1	99	65.248	Sarcophilus_harrisii
ENSCING00000004639	-	99	65.564	ENSSFOG00015020000	kpnb1	99	65.564	Scleropages_formosus
ENSCING00000004639	-	99	65.108	ENSSDUG00000016218	kpnb1	99	65.108	Seriola_dumerili
ENSCING00000004639	-	97	65.268	ENSSLDG00000021549	kpnb1	96	65.268	Seriola_lalandi_dorsalis
ENSCING00000004639	-	99	64.880	ENSSPUG00000017799	KPNB1	99	64.880	Sphenodon_punctatus
ENSCING00000004639	-	99	65.108	ENSSPAG00000019346	kpnb1	99	65.108	Stegastes_partitus
ENSCING00000004639	-	99	64.538	ENSSSCG00000017514	KPNB1	99	64.538	Sus_scrofa
ENSCING00000004639	-	95	61.401	ENSTGUG00000003387	KPNB1	99	61.401	Taeniopygia_guttata
ENSCING00000004639	-	99	64.652	ENSTRUG00000000542	kpnb1	99	64.652	Takifugu_rubripes
ENSCING00000004639	-	99	64.538	ENSTNIG00000006494	kpnb1	99	64.538	Tetraodon_nigroviridis
ENSCING00000004639	-	95	64.964	ENSTTRG00000004682	KPNB1	99	64.964	Tursiops_truncatus
ENSCING00000004639	-	99	64.538	ENSUAMG00000025344	KPNB1	99	64.538	Ursus_americanus
ENSCING00000004639	-	95	64.964	ENSUMAG00000016471	KPNB1	95	64.964	Ursus_maritimus
ENSCING00000004639	-	99	55.125	ENSVPAG00000003675	KPNB1	99	55.125	Vicugna_pacos
ENSCING00000004639	-	99	64.538	ENSVVUG00000003085	KPNB1	99	64.538	Vulpes_vulpes
ENSCING00000004639	-	99	64.310	ENSXETG00000014717	kpnb1	99	64.310	Xenopus_tropicalis
ENSCING00000004639	-	99	64.766	ENSXMAG00000018792	kpnb1	99	64.766	Xiphophorus_maculatus