EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000004657 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 1067 bases
Position: chr12:5160083-5161149
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000009643	MMR_HSR1	PF01926.23	1.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000009643	-	558	-	ENSCINP00000009643	185 (aa)	-	F6RLS6

Gene Model

Click here to download ENSCING00000004657's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000004657's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000004657	-	94	59.429	ENSG00000113966	ARL6	94	59.429	Homo_sapiens
ENSCING00000004657	-	92	57.803	ENSAPOG00000024515	ARL6	93	57.803	Acanthochromis_polyacanthus
ENSCING00000004657	-	89	60.241	ENSAPOG00000016893	-	90	60.241	Acanthochromis_polyacanthus
ENSCING00000004657	-	89	60.241	ENSAMEG00000013671	ARL6	91	60.241	Ailuropoda_melanoleuca
ENSCING00000004657	-	89	60.843	ENSACIG00000000945	-	90	60.843	Amphilophus_citrinellus
ENSCING00000004657	-	88	58.537	ENSACIG00000022050	ARL6	69	58.537	Amphilophus_citrinellus
ENSCING00000004657	-	89	60.241	ENSAOCG00000008262	-	90	60.241	Amphiprion_ocellaris
ENSCING00000004657	-	92	57.803	ENSAOCG00000003575	ARL6	93	57.803	Amphiprion_ocellaris
ENSCING00000004657	-	91	60.000	ENSAPEG00000012838	-	88	60.000	Amphiprion_percula
ENSCING00000004657	-	92	57.803	ENSAPEG00000020063	ARL6	93	57.803	Amphiprion_percula
ENSCING00000004657	-	91	58.824	ENSATEG00000001425	-	90	58.824	Anabas_testudineus
ENSCING00000004657	-	96	57.778	ENSAPLG00000004069	ARL6	96	57.778	Anas_platyrhynchos
ENSCING00000004657	-	91	59.412	ENSACAG00000009179	ARL6	87	59.412	Anolis_carolinensis
ENSCING00000004657	-	94	55.429	ENSANAG00000031061	-	94	55.429	Aotus_nancymaae
ENSCING00000004657	-	94	58.286	ENSANAG00000032648	-	94	58.286	Aotus_nancymaae
ENSCING00000004657	-	91	59.412	ENSACLG00000020245	-	90	59.412	Astatotilapia_calliptera
ENSCING00000004657	-	92	58.382	ENSACLG00000024656	ARL6	93	58.382	Astatotilapia_calliptera
ENSCING00000004657	-	94	60.000	ENSAMXG00000035902	ARL6	94	60.000	Astyanax_mexicanus
ENSCING00000004657	-	94	57.714	ENSBTAG00000010091	ARL6	94	57.714	Bos_taurus
ENSCING00000004657	-	91	44.706	WBGene00000193	arl-6	89	44.706	Caenorhabditis_elegans
ENSCING00000004657	-	94	58.857	ENSCJAG00000008542	ARL6	94	58.857	Callithrix_jacchus
ENSCING00000004657	-	94	59.429	ENSCAFG00000009111	ARL6	94	59.429	Canis_familiaris
ENSCING00000004657	-	94	59.429	ENSCAFG00020009819	ARL6	94	59.429	Canis_lupus_dingo
ENSCING00000004657	-	91	57.647	ENSCHIG00000017792	ARL6	91	57.647	Capra_hircus
ENSCING00000004657	-	94	59.429	ENSTSYG00000001257	ARL6	94	59.429	Carlito_syrichta
ENSCING00000004657	-	88	58.788	ENSCAPG00000007819	ARL6	88	58.788	Cavia_aperea
ENSCING00000004657	-	91	58.824	ENSCPOG00000005344	ARL6	91	58.824	Cavia_porcellus
ENSCING00000004657	-	94	60.000	ENSCATG00000031356	ARL6	94	60.000	Cercocebus_atys
ENSCING00000004657	-	94	58.857	ENSCLAG00000011788	ARL6	94	58.857	Chinchilla_lanigera
ENSCING00000004657	-	94	60.000	ENSCSAG00000005966	ARL6	94	60.000	Chlorocebus_sabaeus
ENSCING00000004657	-	94	59.429	ENSCPBG00000005852	ARL6	90	59.429	Chrysemys_picta_bellii
ENSCING00000004657	-	92	62.428	ENSCING00000015355	-	93	62.428	Ciona_intestinalis
ENSCING00000004657	-	95	77.901	ENSCSAVG00000000015	-	95	77.901	Ciona_savignyi
ENSCING00000004657	-	94	47.429	ENSCANG00000029903	ARL6	92	47.429	Colobus_angolensis_palliatus
ENSCING00000004657	-	94	58.857	ENSCGRG00001021791	Arl6	94	58.857	Cricetulus_griseus_chok1gshd
ENSCING00000004657	-	94	58.857	ENSCGRG00000002022	Arl6	94	58.857	Cricetulus_griseus_crigri
ENSCING00000004657	-	92	50.292	ENSCSEG00000013136	-	83	50.292	Cynoglossus_semilaevis
ENSCING00000004657	-	92	58.960	ENSCSEG00000005784	ARL6	93	58.960	Cynoglossus_semilaevis
ENSCING00000004657	-	92	57.803	ENSCVAG00000015183	ARL6	93	57.803	Cyprinodon_variegatus
ENSCING00000004657	-	79	54.268	ENSCVAG00000016249	ARL6	86	54.268	Cyprinodon_variegatus
ENSCING00000004657	-	96	58.333	ENSDARG00000032056	arl6	96	58.333	Danio_rerio
ENSCING00000004657	-	94	59.429	ENSDNOG00000032833	ARL6	94	59.429	Dasypus_novemcinctus
ENSCING00000004657	-	94	58.286	ENSDORG00000009252	Arl6	94	58.286	Dipodomys_ordii
ENSCING00000004657	-	91	47.399	FBgn0034446	Arl6	85	47.399	Drosophila_melanogaster
ENSCING00000004657	-	96	48.889	ENSEBUG00000011004	arl6	96	48.889	Eptatretus_burgeri
ENSCING00000004657	-	94	60.000	ENSEASG00005010902	ARL6	94	60.000	Equus_asinus_asinus
ENSCING00000004657	-	56	66.990	ENSEEUG00000005325	ARL6	55	66.990	Erinaceus_europaeus
ENSCING00000004657	-	94	51.579	ENSELUG00000000269	ARL6	94	52.717	Esox_lucius
ENSCING00000004657	-	96	58.333	ENSELUG00000002496	-	96	58.333	Esox_lucius
ENSCING00000004657	-	94	58.857	ENSFCAG00000023205	ARL6	94	58.857	Felis_catus
ENSCING00000004657	-	91	59.064	ENSFALG00000001644	ARL6	80	59.064	Ficedula_albicollis
ENSCING00000004657	-	91	59.412	ENSFDAG00000013592	ARL6	91	59.412	Fukomys_damarensis
ENSCING00000004657	-	89	60.241	ENSFHEG00000009562	-	83	60.241	Fundulus_heteroclitus
ENSCING00000004657	-	92	57.803	ENSFHEG00000000850	ARL6	93	57.803	Fundulus_heteroclitus
ENSCING00000004657	-	94	59.429	ENSGMOG00000002486	-	94	59.429	Gadus_morhua
ENSCING00000004657	-	89	59.036	ENSGMOG00000007007	ARL6	87	59.036	Gadus_morhua
ENSCING00000004657	-	96	57.778	ENSGALG00000019215	ARL6	96	57.778	Gallus_gallus
ENSCING00000004657	-	92	58.382	ENSGAFG00000012355	ARL6	93	58.382	Gambusia_affinis
ENSCING00000004657	-	79	53.939	ENSGAFG00000011077	-	93	53.939	Gambusia_affinis
ENSCING00000004657	-	92	58.960	ENSGACG00000015382	ARL6	93	58.960	Gasterosteus_aculeatus
ENSCING00000004657	-	92	60.116	ENSGACG00000006779	-	92	60.116	Gasterosteus_aculeatus
ENSCING00000004657	-	96	57.778	ENSGAGG00000010966	ARL6	96	57.778	Gopherus_agassizii
ENSCING00000004657	-	94	59.429	ENSGGOG00000005474	ARL6	94	59.429	Gorilla_gorilla
ENSCING00000004657	-	78	58.219	ENSHBUG00000002695	ARL6	86	58.219	Haplochromis_burtoni
ENSCING00000004657	-	91	59.412	ENSHBUG00000002834	-	90	59.412	Haplochromis_burtoni
ENSCING00000004657	-	91	59.412	ENSHGLG00000001077	ARL6	91	59.412	Heterocephalus_glaber_female
ENSCING00000004657	-	91	59.412	ENSHGLG00100014402	ARL6	91	59.412	Heterocephalus_glaber_male
ENSCING00000004657	-	88	59.146	ENSHCOG00000003724	ARL6	94	50.505	Hippocampus_comes
ENSCING00000004657	-	89	60.241	ENSHCOG00000019844	-	85	60.241	Hippocampus_comes
ENSCING00000004657	-	97	50.838	ENSIPUG00000024239	ARL6	93	50.838	Ictalurus_punctatus
ENSCING00000004657	-	94	59.429	ENSSTOG00000028777	ARL6	94	59.429	Ictidomys_tridecemlineatus
ENSCING00000004657	-	94	58.286	ENSJJAG00000014206	Arl6	94	58.286	Jaculus_jaculus
ENSCING00000004657	-	91	62.941	ENSKMAG00000000815	-	88	62.941	Kryptolebias_marmoratus
ENSCING00000004657	-	92	58.382	ENSKMAG00000000362	ARL6	93	58.382	Kryptolebias_marmoratus
ENSCING00000004657	-	89	60.843	ENSLBEG00000027842	-	80	60.843	Labrus_bergylta
ENSCING00000004657	-	92	58.960	ENSLBEG00000010881	ARL6	90	58.960	Labrus_bergylta
ENSCING00000004657	-	96	58.889	ENSLACG00000016480	-	96	58.889	Latimeria_chalumnae
ENSCING00000004657	-	91	57.310	ENSLOCG00000010419	arl6	94	57.310	Lepisosteus_oculatus
ENSCING00000004657	-	91	59.064	ENSLAFG00000011730	ARL6	88	59.064	Loxodonta_africana
ENSCING00000004657	-	94	60.000	ENSMFAG00000035901	ARL6	94	60.000	Macaca_fascicularis
ENSCING00000004657	-	94	60.000	ENSMMUG00000038349	ARL6	90	64.220	Macaca_mulatta
ENSCING00000004657	-	94	60.000	ENSMNEG00000032712	ARL6	94	60.000	Macaca_nemestrina
ENSCING00000004657	-	94	60.000	ENSMLEG00000044308	ARL6	94	60.000	Mandrillus_leucophaeus
ENSCING00000004657	-	89	55.307	ENSMAMG00000018088	-	88	55.307	Mastacembelus_armatus
ENSCING00000004657	-	92	59.538	ENSMAMG00000002718	ARL6	93	59.538	Mastacembelus_armatus
ENSCING00000004657	-	91	59.412	ENSMZEG00005010769	-	90	59.412	Maylandia_zebra
ENSCING00000004657	-	92	58.382	ENSMZEG00005002556	ARL6	93	58.382	Maylandia_zebra
ENSCING00000004657	-	96	57.459	ENSMGAG00000014417	ARL6	96	57.459	Meleagris_gallopavo
ENSCING00000004657	-	94	58.857	ENSMAUG00000016932	Arl6	94	58.857	Mesocricetus_auratus
ENSCING00000004657	-	94	58.857	ENSMICG00000048962	ARL6	94	58.857	Microcebus_murinus
ENSCING00000004657	-	94	58.857	ENSMOCG00000022581	Arl6	94	58.857	Microtus_ochrogaster
ENSCING00000004657	-	94	57.143	ENSMMOG00000005765	-	83	57.143	Mola_mola
ENSCING00000004657	-	88	59.756	ENSMMOG00000017848	ARL6	85	59.756	Mola_mola
ENSCING00000004657	-	94	59.429	ENSMODG00000017010	ARL6	94	59.429	Monodelphis_domestica
ENSCING00000004657	-	91	57.647	ENSMALG00000004143	ARL6	92	57.647	Monopterus_albus
ENSCING00000004657	-	92	59.538	ENSMALG00000016513	ARL6	93	59.538	Monopterus_albus
ENSCING00000004657	-	94	58.857	MGP_CAROLIEiJ_G0020853	Arl6	94	58.857	Mus_caroli
ENSCING00000004657	-	94	59.429	ENSMUSG00000022722	Arl6	94	59.429	Mus_musculus
ENSCING00000004657	-	94	58.286	MGP_PahariEiJ_G0016558	Arl6	94	58.286	Mus_pahari
ENSCING00000004657	-	94	58.857	MGP_SPRETEiJ_G0021760	Arl6	94	58.857	Mus_spretus
ENSCING00000004657	-	91	59.412	ENSMPUG00000002675	ARL6	87	59.412	Mustela_putorius_furo
ENSCING00000004657	-	94	58.286	ENSNGAG00000000832	Arl6	94	58.286	Nannospalax_galili
ENSCING00000004657	-	88	59.146	ENSNBRG00000017591	ARL6	80	59.146	Neolamprologus_brichardi
ENSCING00000004657	-	91	61.176	ENSNBRG00000004364	-	88	61.176	Neolamprologus_brichardi
ENSCING00000004657	-	94	59.429	ENSNLEG00000027577	ARL6	94	59.429	Nomascus_leucogenys
ENSCING00000004657	-	94	58.857	ENSOPRG00000015714	ARL6	94	58.857	Ochotona_princeps
ENSCING00000004657	-	91	60.588	ENSODEG00000000685	ARL6	91	60.588	Octodon_degus
ENSCING00000004657	-	91	56.150	ENSONIG00000004329	-	89	56.150	Oreochromis_niloticus
ENSCING00000004657	-	92	58.382	ENSONIG00000003098	ARL6	93	58.382	Oreochromis_niloticus
ENSCING00000004657	-	94	58.286	ENSOANG00000007539	ARL6	94	58.286	Ornithorhynchus_anatinus
ENSCING00000004657	-	94	58.857	ENSOCUG00000029293	ARL6	94	58.857	Oryctolagus_cuniculus
ENSCING00000004657	-	89	60.241	ENSORLG00000015588	-	79	60.241	Oryzias_latipes
ENSCING00000004657	-	92	58.382	ENSORLG00000005063	ARL6	93	58.382	Oryzias_latipes
ENSCING00000004657	-	92	58.382	ENSORLG00020015550	ARL6	92	60.355	Oryzias_latipes_hni
ENSCING00000004657	-	89	59.639	ENSORLG00020003428	-	67	59.639	Oryzias_latipes_hni
ENSCING00000004657	-	92	58.382	ENSORLG00015014133	ARL6	93	58.382	Oryzias_latipes_hsok
ENSCING00000004657	-	89	60.241	ENSORLG00015004725	-	85	60.241	Oryzias_latipes_hsok
ENSCING00000004657	-	89	59.639	ENSOMEG00000023152	-	84	59.639	Oryzias_melastigma
ENSCING00000004657	-	92	58.382	ENSOMEG00000017204	ARL6	93	58.382	Oryzias_melastigma
ENSCING00000004657	-	89	62.048	ENSOGAG00000000536	ARL6	89	62.048	Otolemur_garnettii
ENSCING00000004657	-	94	56.571	ENSOARG00000017430	ARL6	89	56.571	Ovis_aries
ENSCING00000004657	-	94	59.429	ENSPPAG00000043743	ARL6	94	59.429	Pan_paniscus
ENSCING00000004657	-	94	59.429	ENSPPRG00000018780	ARL6	94	59.429	Panthera_pardus
ENSCING00000004657	-	94	59.429	ENSPTIG00000008500	ARL6	94	59.429	Panthera_tigris_altaica
ENSCING00000004657	-	94	59.429	ENSPTRG00000015139	ARL6	94	59.429	Pan_troglodytes
ENSCING00000004657	-	94	60.000	ENSPANG00000007238	ARL6	94	60.000	Papio_anubis
ENSCING00000004657	-	96	58.333	ENSPKIG00000021369	arl6	96	58.333	Paramormyrops_kingsleyae
ENSCING00000004657	-	96	58.889	ENSPSIG00000008221	ARL6	96	58.889	Pelodiscus_sinensis
ENSCING00000004657	-	89	59.036	ENSPMGG00000014527	-	91	59.036	Periophthalmus_magnuspinnatus
ENSCING00000004657	-	88	60.366	ENSPMGG00000008663	ARL6	84	60.366	Periophthalmus_magnuspinnatus
ENSCING00000004657	-	94	58.857	ENSPEMG00000021089	Arl6	94	58.857	Peromyscus_maniculatus_bairdii
ENSCING00000004657	-	94	59.429	ENSPCIG00000010456	ARL6	94	59.429	Phascolarctos_cinereus
ENSCING00000004657	-	89	55.738	ENSPFOG00000006540	-	85	55.738	Poecilia_formosa
ENSCING00000004657	-	90	57.396	ENSPFOG00000008534	ARL6	88	57.396	Poecilia_formosa
ENSCING00000004657	-	92	56.647	ENSPLAG00000008306	ARL6	93	56.647	Poecilia_latipinna
ENSCING00000004657	-	94	58.857	ENSPLAG00000012234	-	88	58.857	Poecilia_latipinna
ENSCING00000004657	-	92	56.647	ENSPMEG00000008489	ARL6	93	56.647	Poecilia_mexicana
ENSCING00000004657	-	89	60.241	ENSPMEG00000014418	-	84	60.241	Poecilia_mexicana
ENSCING00000004657	-	94	58.286	ENSPREG00000013042	-	88	58.286	Poecilia_reticulata
ENSCING00000004657	-	89	56.886	ENSPREG00000021943	ARL6	90	56.886	Poecilia_reticulata
ENSCING00000004657	-	91	55.191	ENSPNYG00000016273	-	91	55.191	Pundamilia_nyererei
ENSCING00000004657	-	78	58.219	ENSPNYG00000004054	ARL6	86	58.219	Pundamilia_nyererei
ENSCING00000004657	-	94	60.000	ENSPNAG00000024137	ARL6	94	60.000	Pygocentrus_nattereri
ENSCING00000004657	-	94	60.000	ENSRNOG00000001689	Arl6	94	60.000	Rattus_norvegicus
ENSCING00000004657	-	94	60.000	ENSRBIG00000031963	ARL6	94	60.000	Rhinopithecus_bieti
ENSCING00000004657	-	94	60.000	ENSRROG00000041416	ARL6	94	60.000	Rhinopithecus_roxellana
ENSCING00000004657	-	94	58.286	ENSSBOG00000031045	ARL6	94	58.286	Saimiri_boliviensis_boliviensis
ENSCING00000004657	-	94	58.857	ENSSHAG00000007402	ARL6	94	58.857	Sarcophilus_harrisii
ENSCING00000004657	-	96	58.889	ENSSFOG00015023135	arl6	96	58.889	Scleropages_formosus
ENSCING00000004657	-	88	63.636	ENSSFOG00015004083	arl6	85	63.855	Scleropages_formosus
ENSCING00000004657	-	92	58.382	ENSSMAG00000021333	ARL6	93	58.382	Scophthalmus_maximus
ENSCING00000004657	-	94	54.688	ENSSMAG00000007588	-	94	54.688	Scophthalmus_maximus
ENSCING00000004657	-	78	51.923	ENSSDUG00000006652	ARL6	82	51.875	Seriola_dumerili
ENSCING00000004657	-	91	59.412	ENSSDUG00000013427	-	92	59.412	Seriola_dumerili
ENSCING00000004657	-	91	54.545	ENSSLDG00000023797	ARL6	93	54.545	Seriola_lalandi_dorsalis
ENSCING00000004657	-	92	58.960	ENSSLDG00000000746	ARL6	93	58.960	Seriola_lalandi_dorsalis
ENSCING00000004657	-	96	57.778	ENSSPUG00000009412	ARL6	96	57.778	Sphenodon_punctatus
ENSCING00000004657	-	92	57.803	ENSSPAG00000017528	ARL6	93	57.803	Stegastes_partitus
ENSCING00000004657	-	89	55.307	ENSSPAG00000013916	-	91	55.307	Stegastes_partitus
ENSCING00000004657	-	94	59.429	ENSSSCG00000027278	ARL6	94	59.429	Sus_scrofa
ENSCING00000004657	-	96	57.222	ENSTGUG00000013497	ARL6	96	57.222	Taeniopygia_guttata
ENSCING00000004657	-	92	58.960	ENSTRUG00000017239	ARL6	93	58.960	Takifugu_rubripes
ENSCING00000004657	-	89	57.831	ENSTRUG00000003716	-	71	57.831	Takifugu_rubripes
ENSCING00000004657	-	90	51.613	ENSTNIG00000004395	ARL6	89	51.613	Tetraodon_nigroviridis
ENSCING00000004657	-	92	58.382	ENSTNIG00000009430	ARL6	93	58.382	Tetraodon_nigroviridis
ENSCING00000004657	-	94	58.286	ENSTBEG00000002112	ARL6	94	58.286	Tupaia_belangeri
ENSCING00000004657	-	94	46.552	ENSTTRG00000001601	ARL6	94	46.552	Tursiops_truncatus
ENSCING00000004657	-	94	59.429	ENSUAMG00000004582	ARL6	94	59.429	Ursus_americanus
ENSCING00000004657	-	94	59.429	ENSUMAG00000013919	ARL6	94	59.429	Ursus_maritimus
ENSCING00000004657	-	94	60.000	ENSVPAG00000011377	ARL6	94	60.000	Vicugna_pacos
ENSCING00000004657	-	94	60.000	ENSVVUG00000021551	ARL6	79	60.000	Vulpes_vulpes
ENSCING00000004657	-	92	57.225	ENSXMAG00000021202	ARL6	93	57.225	Xiphophorus_maculatus
ENSCING00000004657	-	94	58.286	ENSXMAG00000003438	-	88	58.286	Xiphophorus_maculatus