EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000004681 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 9247 bases
Position: chr1:7403680-7412926
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000009697	HA2	PF04408.23	8.5e-14	1	1
ENSCINP00000009702	HA2	PF04408.23	8.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000009702	-	3315	-	ENSCINP00000009702	1105 (aa)	-	F6QSR3
ENSCINT00000009697	-	3306	-	ENSCINP00000009697	1102 (aa)	-	F6RBH3

Gene Model

Click here to download ENSCING00000004681's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000004681's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000004681	-	99	49.731	ENSG00000134815	DHX34	96	49.820	Homo_sapiens
ENSCING00000004681	-	99	50.309	ENSAPOG00000012602	dhx34	97	50.663	Acanthochromis_polyacanthus
ENSCING00000004681	-	99	48.523	ENSAMEG00000008270	DHX34	96	48.877	Ailuropoda_melanoleuca
ENSCING00000004681	-	99	50.973	ENSACIG00000024038	dhx34	97	50.888	Amphilophus_citrinellus
ENSCING00000004681	-	99	50.000	ENSAOCG00000006310	dhx34	98	50.354	Amphiprion_ocellaris
ENSCING00000004681	-	99	50.223	ENSAPEG00000013725	dhx34	97	50.442	Amphiprion_percula
ENSCING00000004681	-	99	50.088	ENSATEG00000009105	dhx34	98	50.177	Anabas_testudineus
ENSCING00000004681	-	83	47.503	ENSACAG00000004112	DHX34	97	47.863	Anolis_carolinensis
ENSCING00000004681	-	99	49.462	ENSANAG00000038287	DHX34	96	49.550	Aotus_nancymaae
ENSCING00000004681	-	99	50.662	ENSACLG00000021819	dhx34	98	50.443	Astatotilapia_calliptera
ENSCING00000004681	-	99	49.478	ENSAMXG00000019705	dhx34	98	49.391	Astyanax_mexicanus
ENSCING00000004681	-	99	50.044	ENSBTAG00000006848	DHX34	96	50.045	Bos_taurus
ENSCING00000004681	-	86	42.887	WBGene00021365	smgl-2	86	41.247	Caenorhabditis_elegans
ENSCING00000004681	-	99	49.462	ENSCJAG00000011504	DHX34	95	49.550	Callithrix_jacchus
ENSCING00000004681	-	99	49.416	ENSCAFG00000004170	DHX34	96	49.282	Canis_familiaris
ENSCING00000004681	-	99	49.506	ENSCAFG00020001163	DHX34	96	49.506	Canis_lupus_dingo
ENSCING00000004681	-	99	50.045	ENSCHIG00000024526	DHX34	96	50.224	Capra_hircus
ENSCING00000004681	-	93	53.456	ENSTSYG00000031168	DHX34	89	53.356	Carlito_syrichta
ENSCING00000004681	-	99	49.110	ENSCAPG00000014599	DHX34	96	49.375	Cavia_aperea
ENSCING00000004681	-	99	49.643	ENSCPOG00000006510	DHX34	96	49.462	Cavia_porcellus
ENSCING00000004681	-	99	50.045	ENSCCAG00000028675	DHX34	96	49.821	Cebus_capucinus
ENSCING00000004681	-	99	48.065	ENSCATG00000032316	DHX34	96	47.975	Cercocebus_atys
ENSCING00000004681	-	99	49.290	ENSCLAG00000000906	DHX34	96	49.109	Chinchilla_lanigera
ENSCING00000004681	-	99	47.477	ENSCSAG00000002965	DHX34	96	47.387	Chlorocebus_sabaeus
ENSCING00000004681	-	100	81.522	ENSCSAVG00000009685	-	100	90.196	Ciona_savignyi
ENSCING00000004681	-	99	49.642	ENSCANG00000037215	DHX34	96	49.730	Colobus_angolensis_palliatus
ENSCING00000004681	-	99	49.735	ENSCSEG00000007100	dhx34	97	49.823	Cynoglossus_semilaevis
ENSCING00000004681	-	99	50.309	ENSCVAG00000002423	dhx34	97	50.309	Cyprinodon_variegatus
ENSCING00000004681	-	99	49.650	ENSDARG00000061168	dhx34	98	49.736	Danio_rerio
ENSCING00000004681	-	100	45.044	ENSDNOG00000031738	DHX34	96	44.916	Dasypus_novemcinctus
ENSCING00000004681	-	99	49.153	ENSDORG00000008437	Dhx34	96	49.102	Dipodomys_ordii
ENSCING00000004681	-	98	41.764	FBgn0052533	CG32533	95	41.944	Drosophila_melanogaster
ENSCING00000004681	-	61	54.286	ENSETEG00000013686	-	59	54.286	Echinops_telfairi
ENSCING00000004681	-	99	49.418	ENSEBUG00000014272	dhx34	99	49.865	Eptatretus_burgeri
ENSCING00000004681	-	99	50.404	ENSEASG00005004155	DHX34	96	50.223	Equus_asinus_asinus
ENSCING00000004681	-	99	50.314	ENSECAG00000011354	DHX34	96	53.488	Equus_caballus
ENSCING00000004681	-	81	57.692	ENSEEUG00000009027	DHX34	80	57.692	Erinaceus_europaeus
ENSCING00000004681	-	99	49.479	ENSELUG00000021992	dhx34	98	49.217	Esox_lucius
ENSCING00000004681	-	99	49.413	ENSFCAG00000006144	DHX34	96	49.593	Felis_catus
ENSCING00000004681	-	83	53.704	ENSFDAG00000014928	DHX34	91	53.704	Fukomys_damarensis
ENSCING00000004681	-	99	51.019	ENSFHEG00000000517	dhx34	99	51.019	Fundulus_heteroclitus
ENSCING00000004681	-	99	50.531	ENSGMOG00000013400	dhx34	98	50.265	Gadus_morhua
ENSCING00000004681	-	99	50.044	ENSGACG00000013085	dhx34	97	67.647	Gasterosteus_aculeatus
ENSCING00000004681	-	67	55.260	ENSGAGG00000008776	DHX34	87	57.483	Gopherus_agassizii
ENSCING00000004681	-	99	47.760	ENSGGOG00000010037	DHX34	96	47.838	Gorilla_gorilla
ENSCING00000004681	-	99	50.485	ENSHBUG00000009820	dhx34	98	50.619	Haplochromis_burtoni
ENSCING00000004681	-	99	50.089	ENSHGLG00000004917	DHX34	96	49.911	Heterocephalus_glaber_female
ENSCING00000004681	-	99	50.000	ENSHGLG00100017146	DHX34	96	49.821	Heterocephalus_glaber_male
ENSCING00000004681	-	99	49.603	ENSHCOG00000017578	dhx34	97	49.513	Hippocampus_comes
ENSCING00000004681	-	99	48.891	ENSIPUG00000000655	Dhx34	98	48.802	Ictalurus_punctatus
ENSCING00000004681	-	99	49.552	ENSSTOG00000015831	DHX34	96	49.552	Ictidomys_tridecemlineatus
ENSCING00000004681	-	99	47.502	ENSLBEG00000018430	dhx34	97	47.590	Labrus_bergylta
ENSCING00000004681	-	86	52.205	ENSLACG00000014421	DHX34	98	52.205	Latimeria_chalumnae
ENSCING00000004681	-	99	49.567	ENSLOCG00000014928	dhx34	96	49.479	Lepisosteus_oculatus
ENSCING00000004681	-	99	48.709	ENSLAFG00000003186	DHX34	96	48.485	Loxodonta_africana
ENSCING00000004681	-	99	49.820	ENSMFAG00000032991	DHX34	96	49.730	Macaca_fascicularis
ENSCING00000004681	-	99	49.730	ENSMMUG00000009275	DHX34	96	49.640	Macaca_mulatta
ENSCING00000004681	-	99	49.820	ENSMNEG00000038649	DHX34	96	49.730	Macaca_nemestrina
ENSCING00000004681	-	78	53.979	ENSMLEG00000041860	DHX34	91	53.864	Mandrillus_leucophaeus
ENSCING00000004681	-	99	50.398	ENSMAMG00000014106	dhx34	96	50.221	Mastacembelus_armatus
ENSCING00000004681	-	99	50.574	ENSMZEG00005024153	dhx34	98	50.355	Maylandia_zebra
ENSCING00000004681	-	99	49.510	ENSMAUG00000013394	Dhx34	96	49.463	Mesocricetus_auratus
ENSCING00000004681	-	99	49.597	ENSMICG00000011585	DHX34	96	49.597	Microcebus_murinus
ENSCING00000004681	-	99	49.776	ENSMOCG00000016843	Dhx34	96	49.731	Microtus_ochrogaster
ENSCING00000004681	-	99	50.358	ENSMMOG00000001357	dhx34	98	50.447	Mola_mola
ENSCING00000004681	-	99	49.510	ENSMODG00000008850	DHX34	97	49.597	Monodelphis_domestica
ENSCING00000004681	-	99	50.663	ENSMALG00000008883	dhx34	97	50.840	Monopterus_albus
ENSCING00000004681	-	99	50.313	MGP_CAROLIEiJ_G0029226	Dhx34	96	50.313	Mus_caroli
ENSCING00000004681	-	99	50.224	ENSMUSG00000006019	Dhx34	96	50.224	Mus_musculus
ENSCING00000004681	-	99	49.821	MGP_PahariEiJ_G0021082	Dhx34	96	49.821	Mus_pahari
ENSCING00000004681	-	99	50.134	MGP_SPRETEiJ_G0030305	Dhx34	96	50.224	Mus_spretus
ENSCING00000004681	-	93	50.242	ENSMPUG00000004925	DHX34	94	50.486	Mustela_putorius_furo
ENSCING00000004681	-	99	49.865	ENSMLUG00000013743	DHX34	96	50.045	Myotis_lucifugus
ENSCING00000004681	-	99	49.462	ENSNGAG00000012974	Dhx34	96	49.462	Nannospalax_galili
ENSCING00000004681	-	99	48.079	ENSNLEG00000003010	DHX34	96	48.158	Nomascus_leucogenys
ENSCING00000004681	-	99	44.454	ENSMEUG00000005067	DHX34	97	44.444	Notamacropus_eugenii
ENSCING00000004681	-	87	53.998	ENSOPRG00000011872	-	84	53.875	Ochotona_princeps
ENSCING00000004681	-	99	48.479	ENSODEG00000006333	DHX34	96	48.338	Octodon_degus
ENSCING00000004681	-	99	50.708	ENSONIG00000004067	dhx34	98	50.888	Oreochromis_niloticus
ENSCING00000004681	-	75	46.722	ENSOANG00000000569	-	95	47.080	Ornithorhynchus_anatinus
ENSCING00000004681	-	99	49.640	ENSOCUG00000014005	DHX34	96	49.640	Oryctolagus_cuniculus
ENSCING00000004681	-	99	50.000	ENSORLG00000002308	dhx34	97	49.868	Oryzias_latipes
ENSCING00000004681	-	99	50.088	ENSORLG00020017122	dhx34	96	49.956	Oryzias_latipes_hni
ENSCING00000004681	-	99	50.353	ENSORLG00015005813	dhx34	97	50.221	Oryzias_latipes_hsok
ENSCING00000004681	-	99	50.710	ENSOMEG00000001279	dhx34	97	50.888	Oryzias_melastigma
ENSCING00000004681	-	99	49.821	ENSOGAG00000002061	DHX34	96	49.910	Otolemur_garnettii
ENSCING00000004681	-	81	53.724	ENSOARG00000011049	DHX34	86	53.724	Ovis_aries
ENSCING00000004681	-	99	47.760	ENSPPAG00000029582	DHX34	96	47.838	Pan_paniscus
ENSCING00000004681	-	99	49.593	ENSPPRG00000002535	DHX34	96	49.774	Panthera_pardus
ENSCING00000004681	-	96	40.543	ENSPTIG00000018435	DHX34	89	46.647	Panthera_tigris_altaica
ENSCING00000004681	-	99	49.731	ENSPTRG00000011207	DHX34	96	49.820	Pan_troglodytes
ENSCING00000004681	-	99	49.820	ENSPANG00000011774	DHX34	96	49.730	Papio_anubis
ENSCING00000004681	-	99	49.383	ENSPKIG00000013394	dhx34	98	49.297	Paramormyrops_kingsleyae
ENSCING00000004681	-	99	50.581	ENSPMGG00000016033	dhx34	98	50.581	Periophthalmus_magnuspinnatus
ENSCING00000004681	-	99	49.422	ENSPEMG00000017613	Dhx34	96	49.556	Peromyscus_maniculatus_bairdii
ENSCING00000004681	-	99	52.712	ENSPMAG00000000368	dhx34	99	52.984	Petromyzon_marinus
ENSCING00000004681	-	99	49.423	ENSPCIG00000000889	DHX34	89	58.065	Phascolarctos_cinereus
ENSCING00000004681	-	99	50.310	ENSPFOG00000011417	dhx34	97	50.265	Poecilia_formosa
ENSCING00000004681	-	99	50.441	ENSPLAG00000021500	dhx34	97	50.353	Poecilia_latipinna
ENSCING00000004681	-	99	50.353	ENSPMEG00000008135	dhx34	97	50.353	Poecilia_mexicana
ENSCING00000004681	-	99	50.311	ENSPREG00000016403	dhx34	97	50.134	Poecilia_reticulata
ENSCING00000004681	-	99	49.731	ENSPPYG00000010172	DHX34	96	49.820	Pongo_abelii
ENSCING00000004681	-	80	55.978	ENSPCAG00000003843	DHX34	75	57.345	Procavia_capensis
ENSCING00000004681	-	99	49.955	ENSPCOG00000027801	DHX34	96	49.642	Propithecus_coquereli
ENSCING00000004681	-	83	48.915	ENSPVAG00000004017	DHX34	99	49.407	Pteropus_vampyrus
ENSCING00000004681	-	99	50.796	ENSPNYG00000007967	dhx34	98	50.578	Pundamilia_nyererei
ENSCING00000004681	-	99	49.913	ENSPNAG00000015028	dhx34	98	50.000	Pygocentrus_nattereri
ENSCING00000004681	-	96	50.422	ENSRNOG00000047575	Dhx34	95	50.471	Rattus_norvegicus
ENSCING00000004681	-	99	48.496	ENSRBIG00000037382	DHX34	96	48.577	Rhinopithecus_bieti
ENSCING00000004681	-	99	49.198	ENSRROG00000042872	DHX34	96	49.284	Rhinopithecus_roxellana
ENSCING00000004681	-	99	49.821	ENSSBOG00000026147	DHX34	96	53.385	Saimiri_boliviensis_boliviensis
ENSCING00000004681	-	99	49.735	ENSSFOG00015023082	dhx34	98	49.736	Scleropages_formosus
ENSCING00000004681	-	99	50.088	ENSSMAG00000000815	dhx34	97	50.088	Scophthalmus_maximus
ENSCING00000004681	-	92	53.016	ENSSDUG00000021018	dhx34	94	53.027	Seriola_dumerili
ENSCING00000004681	-	99	50.705	ENSSLDG00000005497	dhx34	97	50.708	Seriola_lalandi_dorsalis
ENSCING00000004681	-	76	55.431	ENSSPUG00000012308	DHX34	94	54.675	Sphenodon_punctatus
ENSCING00000004681	-	97	50.874	ENSSPAG00000023353	dhx34	96	50.966	Stegastes_partitus
ENSCING00000004681	-	83	52.505	ENSSSCG00000003114	DHX34	93	51.720	Sus_scrofa
ENSCING00000004681	-	99	48.018	ENSTRUG00000010539	dhx34	98	47.841	Takifugu_rubripes
ENSCING00000004681	-	99	50.088	ENSTNIG00000016288	dhx34	97	68.627	Tetraodon_nigroviridis
ENSCING00000004681	-	76	56.076	ENSTBEG00000007047	DHX34	73	56.119	Tupaia_belangeri
ENSCING00000004681	-	99	47.090	ENSTTRG00000002257	DHX34	96	47.165	Tursiops_truncatus
ENSCING00000004681	-	99	49.283	ENSUAMG00000020189	DHX34	96	49.508	Ursus_americanus
ENSCING00000004681	-	99	49.416	ENSVVUG00000023515	DHX34	96	49.416	Vulpes_vulpes
ENSCING00000004681	-	99	50.357	ENSXETG00000012176	dhx34	98	50.179	Xenopus_tropicalis
ENSCING00000004681	-	99	50.223	ENSXCOG00000009309	dhx34	98	50.223	Xiphophorus_couchianus
ENSCING00000004681	-	99	50.133	ENSXMAG00000007699	dhx34	97	50.133	Xiphophorus_maculatus