EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000004712 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 5747 bases
Position: chr5:2476775-2482521
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000009765	RRM_5	PF13893.6	1.6e-10	1	2
ENSCINP00000009765	RRM_5	PF13893.6	1.6e-10	2	2
ENSCINP00000009765	RRM_1	PF00076.22	3.4e-63	1	3
ENSCINP00000009765	RRM_1	PF00076.22	3.4e-63	2	3
ENSCINP00000009765	RRM_1	PF00076.22	3.4e-63	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000009765	-	1170	-	ENSCINP00000009765	390 (aa)	-	F6QMU4

Gene Model

Click here to download ENSCING00000004712's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000004712's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000004712	-	98	60.052	ENSG00000107105	ELAVL2	100	65.217	Homo_sapiens
ENSCING00000004712	-	91	60.734	ENSAPOG00000022121	ELAVL2	82	60.734	Acanthochromis_polyacanthus
ENSCING00000004712	-	99	60.052	ENSAMEG00000007555	ELAVL2	82	63.068	Ailuropoda_melanoleuca
ENSCING00000004712	-	91	62.429	ENSACIG00000010855	ELAVL2	97	60.169	Amphilophus_citrinellus
ENSCING00000004712	-	91	62.429	ENSAOCG00000019468	ELAVL2	83	62.429	Amphiprion_ocellaris
ENSCING00000004712	-	91	62.429	ENSAPEG00000023474	ELAVL2	83	62.429	Amphiprion_percula
ENSCING00000004712	-	91	62.147	ENSATEG00000018073	ELAVL2	89	62.147	Anabas_testudineus
ENSCING00000004712	-	99	58.929	ENSAPLG00000010429	ELAVL2	82	63.352	Anas_platyrhynchos
ENSCING00000004712	-	99	60.052	ENSACAG00000017521	ELAVL2	77	63.068	Anolis_carolinensis
ENSCING00000004712	-	98	59.794	ENSANAG00000032553	ELAVL2	86	62.784	Aotus_nancymaae
ENSCING00000004712	-	99	56.034	ENSACLG00000002715	ELAVL2	83	62.429	Astatotilapia_calliptera
ENSCING00000004712	-	91	62.606	ENSAMXG00000036990	ELAVL2	83	62.606	Astyanax_mexicanus
ENSCING00000004712	-	99	60.052	ENSBTAG00000046348	ELAVL2	89	63.068	Bos_taurus
ENSCING00000004712	-	99	60.052	ENSCJAG00000008064	ELAVL2	88	63.068	Callithrix_jacchus
ENSCING00000004712	-	99	59.794	ENSCAFG00000001688	ELAVL2	82	62.784	Canis_familiaris
ENSCING00000004712	-	99	60.052	ENSCAFG00020013836	ELAVL2	90	62.784	Canis_lupus_dingo
ENSCING00000004712	-	99	60.104	ENSCHIG00000025894	ELAVL2	89	62.784	Capra_hircus
ENSCING00000004712	-	99	60.052	ENSTSYG00000013066	ELAVL2	87	59.677	Carlito_syrichta
ENSCING00000004712	-	89	58.631	ENSCAPG00000003609	ELAVL2	98	58.631	Cavia_aperea
ENSCING00000004712	-	99	60.052	ENSCPOG00000010472	ELAVL2	86	62.784	Cavia_porcellus
ENSCING00000004712	-	99	60.052	ENSCCAG00000024508	ELAVL2	86	63.068	Cebus_capucinus
ENSCING00000004712	-	99	60.052	ENSCATG00000012522	ELAVL2	86	63.068	Cercocebus_atys
ENSCING00000004712	-	99	60.052	ENSCLAG00000003388	ELAVL2	86	63.068	Chinchilla_lanigera
ENSCING00000004712	-	99	59.794	ENSCSAG00000009718	ELAVL2	82	62.784	Chlorocebus_sabaeus
ENSCING00000004712	-	77	63.415	ENSCHOG00000000635	ELAVL2	60	72.656	Choloepus_hoffmanni
ENSCING00000004712	-	99	60.052	ENSCPBG00000007841	ELAVL2	89	63.068	Chrysemys_picta_bellii
ENSCING00000004712	-	92	85.714	ENSCSAVG00000003440	-	99	85.030	Ciona_savignyi
ENSCING00000004712	-	99	60.052	ENSCANG00000043179	ELAVL2	89	62.784	Colobus_angolensis_palliatus
ENSCING00000004712	-	99	60.622	ENSCGRG00001024409	Elavl2	86	62.784	Cricetulus_griseus_chok1gshd
ENSCING00000004712	-	99	60.622	ENSCGRG00000000487	Elavl2	89	62.784	Cricetulus_griseus_crigri
ENSCING00000004712	-	91	62.712	ENSCSEG00000006335	elavl2	83	62.712	Cynoglossus_semilaevis
ENSCING00000004712	-	91	62.429	ENSCVAG00000013913	ELAVL2	83	62.429	Cyprinodon_variegatus
ENSCING00000004712	-	98	58.808	ENSDARG00000040732	elavl2	100	52.055	Danio_rerio
ENSCING00000004712	-	99	60.052	ENSDNOG00000035657	ELAVL2	82	63.068	Dasypus_novemcinctus
ENSCING00000004712	-	99	60.052	ENSDORG00000010437	Elavl2	86	62.784	Dipodomys_ordii
ENSCING00000004712	-	90	58.592	FBgn0010263	Rbp9	74	59.207	Drosophila_melanogaster
ENSCING00000004712	-	92	55.820	FBgn0086675	fne	94	55.820	Drosophila_melanogaster
ENSCING00000004712	-	99	59.536	ENSETEG00000006134	ELAVL2	82	62.784	Echinops_telfairi
ENSCING00000004712	-	90	53.295	ENSEBUG00000000352	-	96	52.857	Eptatretus_burgeri
ENSCING00000004712	-	92	62.745	ENSEBUG00000008179	-	87	62.712	Eptatretus_burgeri
ENSCING00000004712	-	89	60.323	ENSEBUG00000016008	elavl2	96	60.323	Eptatretus_burgeri
ENSCING00000004712	-	98	59.794	ENSEASG00005004697	ELAVL2	82	62.784	Equus_asinus_asinus
ENSCING00000004712	-	98	59.794	ENSECAG00000020142	ELAVL2	82	62.784	Equus_caballus
ENSCING00000004712	-	98	49.485	ENSEEUG00000008733	ELAVL2	83	51.420	Erinaceus_europaeus
ENSCING00000004712	-	91	62.712	ENSELUG00000010026	ELAVL2	83	62.712	Esox_lucius
ENSCING00000004712	-	99	59.794	ENSFCAG00000011976	ELAVL2	86	62.784	Felis_catus
ENSCING00000004712	-	99	58.673	ENSFALG00000007363	ELAVL2	82	63.068	Ficedula_albicollis
ENSCING00000004712	-	99	59.536	ENSFDAG00000018820	ELAVL2	86	62.784	Fukomys_damarensis
ENSCING00000004712	-	91	60.734	ENSFHEG00000010307	ELAVL2	82	60.734	Fundulus_heteroclitus
ENSCING00000004712	-	91	62.429	ENSGMOG00000011182	ELAVL2	89	62.429	Gadus_morhua
ENSCING00000004712	-	99	59.184	ENSGALG00000015799	ELAVL2	82	63.352	Gallus_gallus
ENSCING00000004712	-	91	62.429	ENSGAFG00000016517	ELAVL2	76	62.429	Gambusia_affinis
ENSCING00000004712	-	91	62.429	ENSGACG00000019484	elavl2	89	62.429	Gasterosteus_aculeatus
ENSCING00000004712	-	99	60.052	ENSGAGG00000022382	ELAVL2	89	63.068	Gopherus_agassizii
ENSCING00000004712	-	98	60.052	ENSGGOG00000003678	ELAVL2	88	60.795	Gorilla_gorilla
ENSCING00000004712	-	91	62.429	ENSHBUG00000005968	ELAVL2	83	62.429	Haplochromis_burtoni
ENSCING00000004712	-	99	59.794	ENSHGLG00000005423	ELAVL2	89	62.784	Heterocephalus_glaber_female
ENSCING00000004712	-	99	59.794	ENSHGLG00100002344	ELAVL2	89	62.784	Heterocephalus_glaber_male
ENSCING00000004712	-	92	60.169	ENSHCOG00000005961	elavl2	82	59.605	Hippocampus_comes
ENSCING00000004712	-	99	57.143	ENSIPUG00000012337	elavl2	81	61.299	Ictalurus_punctatus
ENSCING00000004712	-	99	59.536	ENSSTOG00000007792	ELAVL2	86	62.784	Ictidomys_tridecemlineatus
ENSCING00000004712	-	99	60.052	ENSJJAG00000008247	Elavl2	86	62.784	Jaculus_jaculus
ENSCING00000004712	-	91	62.712	ENSKMAG00000006299	ELAVL2	83	62.712	Kryptolebias_marmoratus
ENSCING00000004712	-	91	62.429	ENSLBEG00000027924	ELAVL2	86	60.169	Labrus_bergylta
ENSCING00000004712	-	99	59.845	ENSLACG00000010888	ELAVL2	89	59.420	Latimeria_chalumnae
ENSCING00000004712	-	99	59.585	ENSLOCG00000012575	ELAVL2	83	62.712	Lepisosteus_oculatus
ENSCING00000004712	-	99	60.052	ENSLAFG00000009938	ELAVL2	85	63.068	Loxodonta_africana
ENSCING00000004712	-	99	60.052	ENSMFAG00000039694	ELAVL2	89	63.068	Macaca_fascicularis
ENSCING00000004712	-	99	60.104	ENSMMUG00000010038	ELAVL2	88	63.068	Macaca_mulatta
ENSCING00000004712	-	99	60.052	ENSMNEG00000032526	ELAVL2	89	63.068	Macaca_nemestrina
ENSCING00000004712	-	91	61.864	ENSMAMG00000004806	ELAVL2	89	61.864	Mastacembelus_armatus
ENSCING00000004712	-	91	62.429	ENSMZEG00005000778	ELAVL2	83	62.429	Maylandia_zebra
ENSCING00000004712	-	97	43.689	ENSMGAG00000008665	ELAVL2	76	71.429	Meleagris_gallopavo
ENSCING00000004712	-	99	60.309	ENSMAUG00000011955	Elavl2	88	60.795	Mesocricetus_auratus
ENSCING00000004712	-	98	60.052	ENSMICG00000001558	ELAVL2	87	61.050	Microcebus_murinus
ENSCING00000004712	-	99	60.309	ENSMOCG00000016960	Elavl2	86	62.784	Microtus_ochrogaster
ENSCING00000004712	-	91	62.712	ENSMMOG00000012031	ELAVL2	89	62.712	Mola_mola
ENSCING00000004712	-	99	60.052	ENSMODG00000003936	ELAVL2	82	63.068	Monodelphis_domestica
ENSCING00000004712	-	91	62.147	ENSMALG00000003411	elavl2	80	62.147	Monopterus_albus
ENSCING00000004712	-	99	60.309	MGP_CAROLIEiJ_G0026159	Elavl2	89	63.068	Mus_caroli
ENSCING00000004712	-	99	60.309	ENSMUSG00000008489	Elavl2	89	63.068	Mus_musculus
ENSCING00000004712	-	99	60.309	MGP_PahariEiJ_G0028496	Elavl2	89	63.068	Mus_pahari
ENSCING00000004712	-	99	60.309	MGP_SPRETEiJ_G0027124	Elavl2	89	63.068	Mus_spretus
ENSCING00000004712	-	99	59.794	ENSMPUG00000015967	ELAVL2	82	62.784	Mustela_putorius_furo
ENSCING00000004712	-	99	60.825	ENSMLUG00000014210	ELAVL2	86	63.920	Myotis_lucifugus
ENSCING00000004712	-	99	60.052	ENSNGAG00000014535	Elavl2	86	62.784	Nannospalax_galili
ENSCING00000004712	-	89	61.489	ENSNBRG00000023764	-	91	61.165	Neolamprologus_brichardi
ENSCING00000004712	-	91	53.371	ENSNBRG00000010284	ELAVL2	89	53.371	Neolamprologus_brichardi
ENSCING00000004712	-	99	59.794	ENSNLEG00000016382	ELAVL2	89	62.784	Nomascus_leucogenys
ENSCING00000004712	-	98	52.320	ENSMEUG00000006499	ELAVL2	82	54.545	Notamacropus_eugenii
ENSCING00000004712	-	99	59.794	ENSOPRG00000012874	ELAVL2	82	62.784	Ochotona_princeps
ENSCING00000004712	-	99	59.794	ENSODEG00000002531	ELAVL2	89	62.784	Octodon_degus
ENSCING00000004712	-	91	62.994	ENSONIG00000007552	ELAVL2	88	62.994	Oreochromis_niloticus
ENSCING00000004712	-	98	55.013	ENSOANG00000009634	ELAVL2	80	57.790	Ornithorhynchus_anatinus
ENSCING00000004712	-	99	59.794	ENSOCUG00000005891	ELAVL2	82	62.784	Oryctolagus_cuniculus
ENSCING00000004712	-	91	62.429	ENSORLG00000004217	ELAVL2	89	60.169	Oryzias_latipes
ENSCING00000004712	-	91	62.429	ENSORLG00020016040	ELAVL2	83	62.429	Oryzias_latipes_hni
ENSCING00000004712	-	91	62.429	ENSORLG00015013661	ELAVL2	83	62.429	Oryzias_latipes_hsok
ENSCING00000004712	-	91	62.429	ENSOMEG00000005178	ELAVL2	83	62.429	Oryzias_melastigma
ENSCING00000004712	-	99	56.286	ENSOGAG00000016228	ELAVL2	86	59.236	Otolemur_garnettii
ENSCING00000004712	-	99	60.052	ENSOARG00000014465	ELAVL2	85	63.068	Ovis_aries
ENSCING00000004712	-	99	59.536	ENSPPAG00000041539	ELAVL2	86	62.784	Pan_paniscus
ENSCING00000004712	-	99	60.052	ENSPPRG00000018510	ELAVL2	88	60.511	Panthera_pardus
ENSCING00000004712	-	99	60.052	ENSPTIG00000005627	ELAVL2	89	62.784	Panthera_tigris_altaica
ENSCING00000004712	-	98	60.052	ENSPTRG00000020830	ELAVL2	89	63.068	Pan_troglodytes
ENSCING00000004712	-	99	60.052	ENSPANG00000025263	ELAVL2	86	63.068	Papio_anubis
ENSCING00000004712	-	99	59.326	ENSPKIG00000001903	-	89	62.147	Paramormyrops_kingsleyae
ENSCING00000004712	-	98	59.845	ENSPKIG00000006187	ELAVL2	84	62.712	Paramormyrops_kingsleyae
ENSCING00000004712	-	89	62.611	ENSPSIG00000015330	ELAVL2	98	62.611	Pelodiscus_sinensis
ENSCING00000004712	-	91	61.905	ENSPMGG00000022018	elavl2	89	62.147	Periophthalmus_magnuspinnatus
ENSCING00000004712	-	99	60.309	ENSPEMG00000014101	Elavl2	86	62.784	Peromyscus_maniculatus_bairdii
ENSCING00000004712	-	99	59.794	ENSPCIG00000011696	ELAVL2	86	62.784	Phascolarctos_cinereus
ENSCING00000004712	-	91	62.429	ENSPFOG00000003436	ELAVL2	76	62.429	Poecilia_formosa
ENSCING00000004712	-	91	62.429	ENSPLAG00000005203	ELAVL2	89	62.429	Poecilia_latipinna
ENSCING00000004712	-	91	62.429	ENSPMEG00000021929	ELAVL2	82	60.169	Poecilia_mexicana
ENSCING00000004712	-	91	62.429	ENSPREG00000017160	ELAVL2	83	62.429	Poecilia_reticulata
ENSCING00000004712	-	99	59.794	ENSPPYG00000019166	ELAVL2	82	62.784	Pongo_abelii
ENSCING00000004712	-	98	56.777	ENSPCAG00000014998	ELAVL2	82	59.659	Procavia_capensis
ENSCING00000004712	-	99	60.052	ENSPCOG00000022819	ELAVL2	88	62.784	Propithecus_coquereli
ENSCING00000004712	-	99	59.794	ENSPVAG00000002688	ELAVL2	82	62.784	Pteropus_vampyrus
ENSCING00000004712	-	96	59.631	ENSPNYG00000001514	ELAVL2	95	60.114	Pundamilia_nyererei
ENSCING00000004712	-	99	59.326	ENSPNAG00000029068	ELAVL2	83	62.323	Pygocentrus_nattereri
ENSCING00000004712	-	99	60.052	ENSRNOG00000006853	Elavl2	88	60.795	Rattus_norvegicus
ENSCING00000004712	-	99	59.794	ENSRBIG00000029495	ELAVL2	86	62.784	Rhinopithecus_bieti
ENSCING00000004712	-	99	60.052	ENSRROG00000041782	ELAVL2	89	63.068	Rhinopithecus_roxellana
ENSCING00000004712	-	99	60.052	ENSSBOG00000028114	ELAVL2	86	63.068	Saimiri_boliviensis_boliviensis
ENSCING00000004712	-	99	57.474	ENSSHAG00000006756	ELAVL2	98	60.062	Sarcophilus_harrisii
ENSCING00000004712	-	98	59.690	ENSSFOG00015001257	ELAVL2	87	61.050	Scleropages_formosus
ENSCING00000004712	-	91	62.745	ENSSFOG00015018252	elavl2	83	62.994	Scleropages_formosus
ENSCING00000004712	-	91	62.429	ENSSMAG00000010745	ELAVL2	83	62.429	Scophthalmus_maximus
ENSCING00000004712	-	91	62.429	ENSSDUG00000008140	ELAVL2	83	62.429	Seriola_dumerili
ENSCING00000004712	-	91	62.429	ENSSLDG00000008455	ELAVL2	89	62.429	Seriola_lalandi_dorsalis
ENSCING00000004712	-	99	59.794	ENSSARG00000005702	ELAVL2	82	62.784	Sorex_araneus
ENSCING00000004712	-	99	60.052	ENSSPUG00000001246	ELAVL2	89	63.068	Sphenodon_punctatus
ENSCING00000004712	-	91	62.429	ENSSPAG00000002388	ELAVL2	89	62.429	Stegastes_partitus
ENSCING00000004712	-	98	59.794	ENSSSCG00000005130	ELAVL2	89	62.784	Sus_scrofa
ENSCING00000004712	-	98	57.513	ENSTGUG00000001349	ELAVL2	88	61.254	Taeniopygia_guttata
ENSCING00000004712	-	91	62.712	ENSTNIG00000011312	elavl2	86	62.712	Tetraodon_nigroviridis
ENSCING00000004712	-	98	49.872	ENSTBEG00000017759	ELAVL2	82	51.989	Tupaia_belangeri
ENSCING00000004712	-	99	59.794	ENSTTRG00000011656	ELAVL2	82	62.784	Tursiops_truncatus
ENSCING00000004712	-	99	60.052	ENSUAMG00000018679	ELAVL2	88	63.068	Ursus_americanus
ENSCING00000004712	-	99	60.052	ENSUMAG00000005644	ELAVL2	90	62.784	Ursus_maritimus
ENSCING00000004712	-	99	59.794	ENSVPAG00000005109	ELAVL2	82	62.784	Vicugna_pacos
ENSCING00000004712	-	98	59.794	ENSVVUG00000021291	ELAVL2	88	60.511	Vulpes_vulpes
ENSCING00000004712	-	99	58.869	ENSXETG00000009387	elavl2	99	58.501	Xenopus_tropicalis
ENSCING00000004712	-	91	60.169	ENSXCOG00000002464	ELAVL2	88	60.169	Xiphophorus_couchianus
ENSCING00000004712	-	91	62.429	ENSXMAG00000029211	ELAVL2	76	62.429	Xiphophorus_maculatus