EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000004797 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 1975 bases
Position: chr1:1695232-1697206
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000009926	L51_S25_CI-B8	PF05047.16	1.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000009926	-	1040	-	ENSCINP00000009926	184 (aa)	-	F6REV8

Gene Model

Click here to download ENSCING00000004797's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000004797's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000004797	-	79	46.667	ENSG00000131368	MRPS25	96	47.706	Homo_sapiens
ENSCING00000004797	-	79	46.000	ENSAPOG00000022005	mrps25	85	46.000	Acanthochromis_polyacanthus
ENSCING00000004797	-	79	47.020	ENSAMEG00000004349	MRPS25	86	47.020	Ailuropoda_melanoleuca
ENSCING00000004797	-	79	46.000	ENSACIG00000007796	mrps25	85	46.000	Amphilophus_citrinellus
ENSCING00000004797	-	79	46.000	ENSAOCG00000017022	mrps25	85	46.000	Amphiprion_ocellaris
ENSCING00000004797	-	79	46.000	ENSAPEG00000016566	mrps25	85	46.000	Amphiprion_percula
ENSCING00000004797	-	79	46.667	ENSATEG00000009141	mrps25	85	46.667	Anabas_testudineus
ENSCING00000004797	-	79	46.667	ENSANAG00000036121	MRPS25	85	47.333	Aotus_nancymaae
ENSCING00000004797	-	78	44.966	ENSAMXG00000019894	mrps25	84	44.966	Astyanax_mexicanus
ENSCING00000004797	-	80	45.098	ENSBTAG00000013723	MRPS25	87	45.098	Bos_taurus
ENSCING00000004797	-	80	39.474	WBGene00021920	mrps-25	87	39.474	Caenorhabditis_elegans
ENSCING00000004797	-	79	46.667	ENSCJAG00000017160	MRPS25	85	47.333	Callithrix_jacchus
ENSCING00000004797	-	79	45.333	ENSCAFG00000028683	MRPS25	85	47.333	Canis_familiaris
ENSCING00000004797	-	79	45.333	ENSCAFG00020006345	MRPS25	85	47.333	Canis_lupus_dingo
ENSCING00000004797	-	80	45.098	ENSCHIG00000009931	MRPS25	87	45.098	Capra_hircus
ENSCING00000004797	-	79	45.333	ENSTSYG00000037222	MRPS25	85	45.333	Carlito_syrichta
ENSCING00000004797	-	54	45.192	ENSCAPG00000006099	MRPS25	82	45.192	Cavia_aperea
ENSCING00000004797	-	79	45.333	ENSCPOG00000020398	MRPS25	85	45.333	Cavia_porcellus
ENSCING00000004797	-	79	46.667	ENSCCAG00000029293	MRPS25	85	47.333	Cebus_capucinus
ENSCING00000004797	-	79	46.000	ENSCATG00000042651	MRPS25	85	46.667	Cercocebus_atys
ENSCING00000004797	-	79	44.667	ENSCLAG00000008381	MRPS25	85	44.667	Chinchilla_lanigera
ENSCING00000004797	-	79	46.000	ENSCSAG00000009193	MRPS25	85	46.667	Chlorocebus_sabaeus
ENSCING00000004797	-	78	42.953	ENSCHOG00000006975	-	83	42.953	Choloepus_hoffmanni
ENSCING00000004797	-	79	45.333	ENSCPBG00000014615	MRPS25	85	45.333	Chrysemys_picta_bellii
ENSCING00000004797	-	79	46.000	ENSCANG00000037875	MRPS25	85	46.667	Colobus_angolensis_palliatus
ENSCING00000004797	-	79	44.667	ENSCGRG00001016556	Mrps25	86	44.667	Cricetulus_griseus_chok1gshd
ENSCING00000004797	-	79	44.667	ENSCGRG00000014568	Mrps25	86	44.667	Cricetulus_griseus_crigri
ENSCING00000004797	-	80	46.711	ENSCSEG00000021392	mrps25	87	46.711	Cynoglossus_semilaevis
ENSCING00000004797	-	79	46.000	ENSCVAG00000012389	mrps25	85	46.000	Cyprinodon_variegatus
ENSCING00000004797	-	78	42.282	ENSDARG00000041306	mrps25	84	42.282	Danio_rerio
ENSCING00000004797	-	55	46.667	ENSDNOG00000048066	-	83	46.667	Dasypus_novemcinctus
ENSCING00000004797	-	54	45.192	ENSDORG00000026838	Mrps25	82	45.192	Dipodomys_ordii
ENSCING00000004797	-	79	40.940	FBgn0030572	mRpS25	87	40.940	Drosophila_melanogaster
ENSCING00000004797	-	79	46.667	ENSEASG00005015419	MRPS25	62	46.667	Equus_asinus_asinus
ENSCING00000004797	-	79	46.000	ENSELUG00000023537	mrps25	85	46.000	Esox_lucius
ENSCING00000004797	-	79	46.667	ENSFCAG00000027687	MRPS25	85	46.667	Felis_catus
ENSCING00000004797	-	80	45.098	ENSFALG00000013684	MRPS25	88	45.098	Ficedula_albicollis
ENSCING00000004797	-	79	44.667	ENSFDAG00000006252	MRPS25	85	44.667	Fukomys_damarensis
ENSCING00000004797	-	75	44.755	ENSFHEG00000003470	mrps25	80	44.755	Fundulus_heteroclitus
ENSCING00000004797	-	79	43.333	ENSGMOG00000017071	mrps25	89	43.333	Gadus_morhua
ENSCING00000004797	-	80	40.909	ENSGALG00000008506	MRPS25	87	44.156	Gallus_gallus
ENSCING00000004797	-	79	45.333	ENSGAFG00000021080	mrps25	85	45.333	Gambusia_affinis
ENSCING00000004797	-	79	45.333	ENSGACG00000002961	mrps25	88	45.333	Gasterosteus_aculeatus
ENSCING00000004797	-	79	44.000	ENSGAGG00000012589	MRPS25	85	44.000	Gopherus_agassizii
ENSCING00000004797	-	79	46.667	ENSGGOG00000011005	MRPS25	85	47.333	Gorilla_gorilla
ENSCING00000004797	-	79	45.333	ENSHBUG00000022813	mrps25	85	45.333	Haplochromis_burtoni
ENSCING00000004797	-	79	45.695	ENSHGLG00100005267	MRPS25	86	45.695	Heterocephalus_glaber_male
ENSCING00000004797	-	79	47.333	ENSHCOG00000010210	mrps25	85	47.333	Hippocampus_comes
ENSCING00000004797	-	78	44.966	ENSIPUG00000022462	mrps25	84	44.966	Ictalurus_punctatus
ENSCING00000004797	-	79	44.000	ENSSTOG00000030962	MRPS25	85	44.000	Ictidomys_tridecemlineatus
ENSCING00000004797	-	59	46.789	ENSJJAG00000013413	Mrps25	96	46.789	Jaculus_jaculus
ENSCING00000004797	-	79	46.000	ENSKMAG00000015394	mrps25	85	46.000	Kryptolebias_marmoratus
ENSCING00000004797	-	79	43.333	ENSLBEG00000005216	mrps25	85	43.333	Labrus_bergylta
ENSCING00000004797	-	81	47.742	ENSLACG00000009006	MRPS25	88	47.742	Latimeria_chalumnae
ENSCING00000004797	-	79	43.333	ENSLOCG00000011170	mrps25	85	43.333	Lepisosteus_oculatus
ENSCING00000004797	-	79	45.333	ENSLAFG00000022178	MRPS25	86	45.333	Loxodonta_africana
ENSCING00000004797	-	80	45.752	ENSMFAG00000035383	MRPS25	87	46.405	Macaca_fascicularis
ENSCING00000004797	-	59	46.789	ENSMMUG00000005157	MRPS25	74	46.789	Macaca_mulatta
ENSCING00000004797	-	80	45.752	ENSMNEG00000034531	MRPS25	87	46.405	Macaca_nemestrina
ENSCING00000004797	-	79	46.000	ENSMLEG00000031574	MRPS25	85	46.667	Mandrillus_leucophaeus
ENSCING00000004797	-	79	46.000	ENSMAMG00000013121	mrps25	85	46.000	Mastacembelus_armatus
ENSCING00000004797	-	79	46.000	ENSMZEG00005000200	mrps25	85	46.000	Maylandia_zebra
ENSCING00000004797	-	78	38.926	ENSMGAG00000010421	MRPS25	85	42.282	Meleagris_gallopavo
ENSCING00000004797	-	79	42.667	ENSMICG00000040033	-	86	42.667	Microcebus_murinus
ENSCING00000004797	-	79	44.667	ENSMOCG00000000775	Mrps25	86	44.667	Microtus_ochrogaster
ENSCING00000004797	-	59	44.037	ENSMMOG00000021174	mrps25	96	44.037	Mola_mola
ENSCING00000004797	-	81	44.805	ENSMODG00000007018	MRPS25	65	44.805	Monodelphis_domestica
ENSCING00000004797	-	79	44.667	ENSMALG00000021413	mrps25	85	44.667	Monopterus_albus
ENSCING00000004797	-	79	44.667	MGP_CAROLIEiJ_G0028662	Mrps25	86	44.667	Mus_caroli
ENSCING00000004797	-	79	44.667	ENSMUSG00000014551	Mrps25	86	44.667	Mus_musculus
ENSCING00000004797	-	79	44.000	MGP_PahariEiJ_G0022409	Mrps25	86	44.000	Mus_pahari
ENSCING00000004797	-	79	47.333	ENSMPUG00000017248	MRPS25	85	47.333	Mustela_putorius_furo
ENSCING00000004797	-	79	45.333	ENSMLUG00000017504	-	85	45.333	Myotis_lucifugus
ENSCING00000004797	-	61	44.828	ENSMLUG00000022193	-	98	44.828	Myotis_lucifugus
ENSCING00000004797	-	79	44.000	ENSNGAG00000021861	Mrps25	86	44.000	Nannospalax_galili
ENSCING00000004797	-	79	45.333	ENSNBRG00000019573	mrps25	85	45.333	Neolamprologus_brichardi
ENSCING00000004797	-	72	46.324	ENSNLEG00000031537	MRPS25	85	47.794	Nomascus_leucogenys
ENSCING00000004797	-	79	45.333	ENSOPRG00000009370	MRPS25	85	45.333	Ochotona_princeps
ENSCING00000004797	-	79	44.000	ENSODEG00000001966	MRPS25	85	44.000	Octodon_degus
ENSCING00000004797	-	79	45.333	ENSONIG00000017238	mrps25	85	45.333	Oreochromis_niloticus
ENSCING00000004797	-	80	45.752	ENSOANG00000021369	MRPS25	87	45.752	Ornithorhynchus_anatinus
ENSCING00000004797	-	79	45.333	ENSOCUG00000006984	MRPS25	85	45.333	Oryctolagus_cuniculus
ENSCING00000004797	-	79	44.667	ENSORLG00000010890	mrps25	85	44.667	Oryzias_latipes
ENSCING00000004797	-	79	44.000	ENSORLG00020020489	mrps25	85	44.000	Oryzias_latipes_hni
ENSCING00000004797	-	79	44.667	ENSORLG00015015827	mrps25	85	44.667	Oryzias_latipes_hsok
ENSCING00000004797	-	79	44.000	ENSOMEG00000009352	mrps25	85	44.000	Oryzias_melastigma
ENSCING00000004797	-	79	45.333	ENSOGAG00000014041	MRPS25	85	45.333	Otolemur_garnettii
ENSCING00000004797	-	59	45.872	ENSOARG00000017225	MRPS25	96	45.872	Ovis_aries
ENSCING00000004797	-	79	46.667	ENSPPAG00000039324	MRPS25	85	47.333	Pan_paniscus
ENSCING00000004797	-	79	46.000	ENSPPRG00000013901	MRPS25	85	46.000	Panthera_pardus
ENSCING00000004797	-	79	46.000	ENSPTIG00000016698	MRPS25	85	46.000	Panthera_tigris_altaica
ENSCING00000004797	-	79	46.667	ENSPTRG00000014658	MRPS25	85	47.333	Pan_troglodytes
ENSCING00000004797	-	79	46.000	ENSPANG00000029339	MRPS25	85	46.667	Papio_anubis
ENSCING00000004797	-	79	47.333	ENSPKIG00000011826	mrps25	85	47.333	Paramormyrops_kingsleyae
ENSCING00000004797	-	79	44.000	ENSPSIG00000008882	MRPS25	85	44.000	Pelodiscus_sinensis
ENSCING00000004797	-	79	45.333	ENSPMGG00000019549	mrps25	85	45.333	Periophthalmus_magnuspinnatus
ENSCING00000004797	-	79	44.667	ENSPEMG00000015595	Mrps25	86	44.667	Peromyscus_maniculatus_bairdii
ENSCING00000004797	-	81	42.857	ENSPMAG00000001827	mrps25	87	42.857	Petromyzon_marinus
ENSCING00000004797	-	79	46.358	ENSPCIG00000023530	-	86	46.358	Phascolarctos_cinereus
ENSCING00000004797	-	79	45.033	ENSPFOG00000011720	mrps25	86	45.033	Poecilia_formosa
ENSCING00000004797	-	79	45.333	ENSPLAG00000013689	mrps25	85	45.333	Poecilia_latipinna
ENSCING00000004797	-	79	45.333	ENSPMEG00000019743	mrps25	85	45.333	Poecilia_mexicana
ENSCING00000004797	-	79	45.333	ENSPREG00000016711	mrps25	85	45.333	Poecilia_reticulata
ENSCING00000004797	-	79	45.333	ENSPPYG00000013409	MRPS25	85	46.000	Pongo_abelii
ENSCING00000004797	-	79	46.667	ENSPCAG00000011135	MRPS25	85	46.667	Procavia_capensis
ENSCING00000004797	-	79	45.333	ENSPNYG00000010498	mrps25	85	45.333	Pundamilia_nyererei
ENSCING00000004797	-	78	44.966	ENSPNAG00000000160	mrps25	84	44.966	Pygocentrus_nattereri
ENSCING00000004797	-	79	44.667	ENSRNOG00000010912	Mrps25	86	44.667	Rattus_norvegicus
ENSCING00000004797	-	79	46.000	ENSRBIG00000012859	MRPS25	85	46.667	Rhinopithecus_bieti
ENSCING00000004797	-	79	46.000	ENSRROG00000034718	MRPS25	85	46.667	Rhinopithecus_roxellana
ENSCING00000004797	-	79	42.667	ENSSBOG00000032606	-	88	48.810	Saimiri_boliviensis_boliviensis
ENSCING00000004797	-	79	46.667	ENSSBOG00000035105	-	85	47.333	Saimiri_boliviensis_boliviensis
ENSCING00000004797	-	80	45.098	ENSSHAG00000016039	MRPS25	87	45.098	Sarcophilus_harrisii
ENSCING00000004797	-	79	49.333	ENSSFOG00015016016	mrps25	85	49.333	Scleropages_formosus
ENSCING00000004797	-	79	46.000	ENSSMAG00000012013	mrps25	85	46.000	Scophthalmus_maximus
ENSCING00000004797	-	79	45.333	ENSSDUG00000012983	mrps25	85	45.333	Seriola_dumerili
ENSCING00000004797	-	79	45.333	ENSSLDG00000004856	mrps25	85	45.333	Seriola_lalandi_dorsalis
ENSCING00000004797	-	79	42.667	ENSSPUG00000017201	MRPS25	85	42.667	Sphenodon_punctatus
ENSCING00000004797	-	79	46.667	ENSSPAG00000011672	mrps25	85	46.667	Stegastes_partitus
ENSCING00000004797	-	79	44.667	ENSSSCG00000034318	MRPS25	85	46.667	Sus_scrofa
ENSCING00000004797	-	80	44.156	ENSTGUG00000010579	MRPS25	88	44.156	Taeniopygia_guttata
ENSCING00000004797	-	79	44.667	ENSTRUG00000011566	mrps25	85	44.667	Takifugu_rubripes
ENSCING00000004797	-	79	44.667	ENSTNIG00000017920	mrps25	85	44.667	Tetraodon_nigroviridis
ENSCING00000004797	-	54	45.192	ENSTBEG00000002596	MRPS25	82	45.192	Tupaia_belangeri
ENSCING00000004797	-	79	46.000	ENSTTRG00000009881	MRPS25	85	46.000	Tursiops_truncatus
ENSCING00000004797	-	79	47.333	ENSUAMG00000002002	MRPS25	68	47.333	Ursus_americanus
ENSCING00000004797	-	79	47.333	ENSUMAG00000017301	MRPS25	68	47.333	Ursus_maritimus
ENSCING00000004797	-	79	44.667	ENSVVUG00000013846	MRPS25	85	46.667	Vulpes_vulpes
ENSCING00000004797	-	55	46.667	ENSXETG00000000318	-	81	46.667	Xenopus_tropicalis
ENSCING00000004797	-	79	46.000	ENSXETG00000004816	mrps25	85	46.000	Xenopus_tropicalis
ENSCING00000004797	-	59	44.954	ENSXCOG00000001254	mrps25	96	44.954	Xiphophorus_couchianus
ENSCING00000004797	-	79	45.333	ENSXMAG00000023324	mrps25	85	45.333	Xiphophorus_maculatus