EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000004858 (Gene tree)
Gene ID: 100186731
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 1619 bases
Position: chr8:391238-392856
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000010033	Ribosomal_L2	PF00181.23	1.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000010033	-	686	-	ENSCINP00000010033	219 (aa)	-	F6TCE2

Gene Model

Click here to download ENSCING00000004858's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000004858's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000004858	-	74	30.682	ENSAMXG00000021532	mrpl2	52	30.682	Astyanax_mexicanus
ENSCING00000004858	-	88	66.837	ENSCSAVG00000005708	-	60	66.837	Ciona_savignyi
ENSCING00000004858	-	58	35.714	ENSFCAG00000028089	MRPL2	50	35.714	Felis_catus
ENSCING00000004858	-	74	31.579	ENSLBEG00000014102	mrpl2	52	31.579	Labrus_bergylta
ENSCING00000004858	-	79	33.908	ENSMOCG00000002525	Mrpl2	52	33.908	Microtus_ochrogaster
ENSCING00000004858	-	78	34.302	MGP_CAROLIEiJ_G0021678	Mrpl2	51	34.302	Mus_caroli
ENSCING00000004858	-	78	34.884	ENSMUSG00000002767	Mrpl2	63	34.302	Mus_musculus
ENSCING00000004858	-	78	33.721	MGP_PahariEiJ_G0020669	Mrpl2	51	33.721	Mus_pahari
ENSCING00000004858	-	78	34.302	MGP_SPRETEiJ_G0022590	Mrpl2	63	33.721	Mus_spretus
ENSCING00000004858	-	81	30.899	ENSPREG00000008625	mrpl2	51	30.899	Poecilia_reticulata
ENSCING00000004858	-	78	33.333	ENSRNOG00000018057	Mrpl2	51	33.333	Rattus_norvegicus
ENSCING00000004858	-	83	31.319	ENSTRUG00000000908	mrpl2	54	31.319	Takifugu_rubripes
ENSCING00000004858	-	72	33.540	ENSTNIG00000013424	mrpl2	50	33.540	Tetraodon_nigroviridis
ENSCING00000004858	-	58	36.508	ENSVVUG00000028143	MRPL2	50	36.508	Vulpes_vulpes