EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000004861 (Gene tree)
Gene ID: 778991
Gene Symbol: zf(c2h2)-12
Alias: -
Full Name: Ciona intestinalis zinc finger protein (zf(c2h2)-12)%2C mRNA.
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 4303 bases
Position: chr2:2165053-2169355
Accession: NM_001078543
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000010037	zf-C2H2	PF00096.26	2.2e-52	1	10
ENSCINP00000010037	zf-C2H2	PF00096.26	2.2e-52	2	10
ENSCINP00000010037	zf-C2H2	PF00096.26	2.2e-52	3	10
ENSCINP00000010037	zf-C2H2	PF00096.26	2.2e-52	4	10
ENSCINP00000010037	zf-C2H2	PF00096.26	2.2e-52	5	10
ENSCINP00000010037	zf-C2H2	PF00096.26	2.2e-52	6	10
ENSCINP00000010037	zf-C2H2	PF00096.26	2.2e-52	7	10
ENSCINP00000010037	zf-C2H2	PF00096.26	2.2e-52	8	10
ENSCINP00000010037	zf-C2H2	PF00096.26	2.2e-52	9	10
ENSCINP00000010037	zf-C2H2	PF00096.26	2.2e-52	10	10
ENSCINP00000010037	zf-met	PF12874.7	2e-18	1	2
ENSCINP00000010037	zf-met	PF12874.7	2e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000010037	-	1686	-	ENSCINP00000010037	540 (aa)	-	F6TCA9

Gene Model

Click here to download ENSCING00000004861's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000004861's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000004861	zf(c2h2)-12	65	34.532	ENSACIG00000017166	-	76	34.532	Amphilophus_citrinellus
ENSCING00000004861	zf(c2h2)-12	66	33.945	ENSAOCG00000018579	-	69	33.945	Amphiprion_ocellaris
ENSCING00000004861	zf(c2h2)-12	74	41.441	ENSAPEG00000007889	-	81	41.441	Amphiprion_percula
ENSCING00000004861	zf(c2h2)-12	71	33.516	ENSAPEG00000019755	-	84	33.516	Amphiprion_percula
ENSCING00000004861	zf(c2h2)-12	70	33.133	ENSAPEG00000007910	-	50	33.133	Amphiprion_percula
ENSCING00000004861	zf(c2h2)-12	69	32.143	ENSAMXG00000032845	-	56	32.407	Astyanax_mexicanus
ENSCING00000004861	zf(c2h2)-12	70	30.921	WBGene00021374	Y37E11B.1	90	30.263	Caenorhabditis_elegans
ENSCING00000004861	zf(c2h2)-12	76	31.373	ENSCING00000000529	zf(btb/c2h2)	60	32.609	Ciona_intestinalis
ENSCING00000004861	zf(c2h2)-12	100	62.637	ENSCSAVG00000006729	-	100	62.637	Ciona_savignyi
ENSCING00000004861	zf(c2h2)-12	63	38.739	ENSCSAVG00000003895	-	100	37.143	Ciona_savignyi
ENSCING00000004861	zf(c2h2)-12	100	71.455	ENSCSAVG00000005896	-	100	71.455	Ciona_savignyi
ENSCING00000004861	zf(c2h2)-12	78	37.234	ENSCSAVG00000009574	-	98	37.234	Ciona_savignyi
ENSCING00000004861	zf(c2h2)-12	76	32.164	ENSCVAG00000016098	-	96	32.164	Cyprinodon_variegatus
ENSCING00000004861	zf(c2h2)-12	69	39.450	ENSCVAG00000002295	-	98	39.450	Cyprinodon_variegatus
ENSCING00000004861	zf(c2h2)-12	73	40.506	FBgn0028895	CG17328	66	40.506	Drosophila_melanogaster
ENSCING00000004861	zf(c2h2)-12	68	30.994	FBgn0030012	CG18262	62	30.994	Drosophila_melanogaster
ENSCING00000004861	zf(c2h2)-12	69	32.571	FBgn0033934	CG17385	64	32.402	Drosophila_melanogaster
ENSCING00000004861	zf(c2h2)-12	93	36.364	ENSEBUG00000008392	-	88	36.096	Eptatretus_burgeri
ENSCING00000004861	zf(c2h2)-12	78	35.657	ENSEBUG00000015522	-	73	35.294	Eptatretus_burgeri
ENSCING00000004861	zf(c2h2)-12	68	38.235	ENSEBUG00000000735	-	98	37.968	Eptatretus_burgeri
ENSCING00000004861	zf(c2h2)-12	72	33.780	ENSEBUG00000004841	-	82	33.780	Eptatretus_burgeri
ENSCING00000004861	zf(c2h2)-12	69	33.463	ENSFHEG00000012990	-	95	32.441	Fundulus_heteroclitus
ENSCING00000004861	zf(c2h2)-12	80	31.597	ENSFHEG00000020889	-	82	30.903	Fundulus_heteroclitus
ENSCING00000004861	zf(c2h2)-12	71	34.940	ENSFHEG00000003596	-	74	34.524	Fundulus_heteroclitus
ENSCING00000004861	zf(c2h2)-12	80	35.556	ENSFHEG00000013644	-	85	35.027	Fundulus_heteroclitus
ENSCING00000004861	zf(c2h2)-12	69	35.000	ENSGACG00000018415	-	99	35.000	Gasterosteus_aculeatus
ENSCING00000004861	zf(c2h2)-12	68	33.918	ENSHCOG00000001313	-	51	35.374	Hippocampus_comes
ENSCING00000004861	zf(c2h2)-12	83	37.349	ENSHCOG00000014887	-	76	37.349	Hippocampus_comes
ENSCING00000004861	zf(c2h2)-12	80	39.706	ENSHCOG00000014881	-	73	39.706	Hippocampus_comes
ENSCING00000004861	zf(c2h2)-12	71	32.184	ENSKMAG00000007658	-	87	32.353	Kryptolebias_marmoratus
ENSCING00000004861	zf(c2h2)-12	73	33.333	ENSKMAG00000012909	-	90	33.333	Kryptolebias_marmoratus
ENSCING00000004861	zf(c2h2)-12	77	31.092	ENSLBEG00000026573	-	75	31.092	Labrus_bergylta
ENSCING00000004861	zf(c2h2)-12	69	32.768	ENSONIG00000003224	-	94	32.768	Oreochromis_niloticus
ENSCING00000004861	zf(c2h2)-12	69	33.133	ENSONIG00000009894	-	100	33.133	Oreochromis_niloticus
ENSCING00000004861	zf(c2h2)-12	75	36.416	ENSONIG00000007812	-	99	35.838	Oreochromis_niloticus
ENSCING00000004861	zf(c2h2)-12	72	34.211	ENSONIG00000016416	-	98	34.211	Oreochromis_niloticus
ENSCING00000004861	zf(c2h2)-12	69	38.971	ENSONIG00000003471	-	97	39.394	Oreochromis_niloticus
ENSCING00000004861	zf(c2h2)-12	74	31.034	ENSORLG00015018254	-	89	30.693	Oryzias_latipes_hsok
ENSCING00000004861	zf(c2h2)-12	84	30.790	ENSOMEG00000017673	-	97	30.245	Oryzias_melastigma
ENSCING00000004861	zf(c2h2)-12	82	33.846	ENSPMGG00000000218	-	60	33.086	Periophthalmus_magnuspinnatus
ENSCING00000004861	zf(c2h2)-12	71	33.094	ENSPMGG00000000489	-	79	32.836	Periophthalmus_magnuspinnatus
ENSCING00000004861	zf(c2h2)-12	78	33.446	ENSPMGG00000022524	-	98	31.613	Periophthalmus_magnuspinnatus
ENSCING00000004861	zf(c2h2)-12	76	33.083	ENSPMGG00000000458	-	92	37.190	Periophthalmus_magnuspinnatus
ENSCING00000004861	zf(c2h2)-12	79	34.653	ENSPMGG00000000243	-	88	34.653	Periophthalmus_magnuspinnatus
ENSCING00000004861	zf(c2h2)-12	70	32.402	ENSPMGG00000019842	-	68	32.402	Periophthalmus_magnuspinnatus
ENSCING00000004861	zf(c2h2)-12	78	36.765	ENSPMGG00000010664	-	97	36.765	Periophthalmus_magnuspinnatus
ENSCING00000004861	zf(c2h2)-12	69	34.637	ENSPMAG00000007983	-	99	33.520	Petromyzon_marinus
ENSCING00000004861	zf(c2h2)-12	69	34.807	ENSPFOG00000020691	-	86	33.702	Poecilia_formosa
ENSCING00000004861	zf(c2h2)-12	69	34.913	ENSPFOG00000002879	-	99	34.091	Poecilia_formosa
ENSCING00000004861	zf(c2h2)-12	82	34.759	ENSPLAG00000006174	-	76	34.316	Poecilia_latipinna
ENSCING00000004861	zf(c2h2)-12	77	34.074	ENSPLAG00000011254	-	94	34.074	Poecilia_latipinna
ENSCING00000004861	zf(c2h2)-12	70	34.074	ENSPMEG00000007503	-	75	34.074	Poecilia_mexicana
ENSCING00000004861	zf(c2h2)-12	68	33.511	ENSPMEG00000021927	-	52	33.511	Poecilia_mexicana
ENSCING00000004861	zf(c2h2)-12	72	34.507	ENSPMEG00000022676	-	99	34.507	Poecilia_mexicana
ENSCING00000004861	zf(c2h2)-12	71	31.487	ENSPMEG00000019229	-	68	31.487	Poecilia_mexicana
ENSCING00000004861	zf(c2h2)-12	77	34.074	ENSPREG00000015352	-	86	34.074	Poecilia_reticulata
ENSCING00000004861	zf(c2h2)-12	71	40.777	ENSPREG00000016204	-	65	31.343	Poecilia_reticulata
ENSCING00000004861	zf(c2h2)-12	71	31.195	ENSPREG00000007146	-	69	31.195	Poecilia_reticulata
ENSCING00000004861	zf(c2h2)-12	81	32.530	ENSSMAG00000000404	-	69	32.530	Scophthalmus_maximus
ENSCING00000004861	zf(c2h2)-12	83	36.508	ENSSDUG00000000946	-	96	34.483	Seriola_dumerili
ENSCING00000004861	zf(c2h2)-12	76	33.333	ENSSDUG00000000871	-	59	33.913	Seriola_dumerili
ENSCING00000004861	zf(c2h2)-12	72	34.286	ENSSLDG00000000464	-	58	34.286	Seriola_lalandi_dorsalis
ENSCING00000004861	zf(c2h2)-12	79	33.043	ENSSLDG00000002515	-	94	34.091	Seriola_lalandi_dorsalis
ENSCING00000004861	zf(c2h2)-12	64	36.066	ENSXCOG00000005697	-	83	40.741	Xiphophorus_couchianus
ENSCING00000004861	zf(c2h2)-12	70	33.333	ENSXMAG00000022242	-	75	33.333	Xiphophorus_maculatus