EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000004877 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 8A-like
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 825 bases
Position: chr8:358553-359377
Accession: 100185146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000010079	RRM_1	PF00076.22	1.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000010079	-	787	-	ENSCINP00000010079	164 (aa)	XP_002129738	A0A1W5BDS1

Gene Model

Click here to download ENSCING00000004877's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03013	RNA transport	KEGG
cin03015	mRNA surveillance pathway	KEGG
cin03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000004877's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000004877	-	89	65.333	ENSG00000265241	RBM8A	91	63.291	Homo_sapiens
ENSCING00000004877	-	93	64.557	ENSAPOG00000009727	rbm8a	90	64.557	Acanthochromis_polyacanthus
ENSCING00000004877	-	89	59.740	ENSAMEG00000017623	RBM8A	92	62.346	Ailuropoda_melanoleuca
ENSCING00000004877	-	95	64.375	ENSACIG00000017678	rbm8a	99	64.557	Amphilophus_citrinellus
ENSCING00000004877	-	93	64.557	ENSAOCG00000023887	rbm8a	76	64.557	Amphiprion_ocellaris
ENSCING00000004877	-	93	64.557	ENSAPEG00000022847	rbm8a	76	64.557	Amphiprion_percula
ENSCING00000004877	-	93	64.557	ENSATEG00000005630	rbm8a	90	64.557	Anabas_testudineus
ENSCING00000004877	-	89	64.901	ENSANAG00000004525	RBM8A	91	62.893	Aotus_nancymaae
ENSCING00000004877	-	93	63.924	ENSACLG00000009627	rbm8a	90	63.924	Astatotilapia_calliptera
ENSCING00000004877	-	89	65.563	ENSAMXG00000040754	rbm8a	91	63.522	Astyanax_mexicanus
ENSCING00000004877	-	80	52.985	WBGene00004387	rnp-4	85	57.377	Caenorhabditis_elegans
ENSCING00000004877	-	89	64.901	ENSCJAG00000046869	RBM8A	91	62.893	Callithrix_jacchus
ENSCING00000004877	-	89	64.901	ENSCAFG00000023172	RBM8A	91	62.893	Canis_familiaris
ENSCING00000004877	-	89	64.901	ENSCAFG00020019945	RBM8A	91	62.893	Canis_lupus_dingo
ENSCING00000004877	-	89	64.901	ENSCHIG00000012114	RBM8A	91	62.893	Capra_hircus
ENSCING00000004877	-	89	64.901	ENSTSYG00000028809	RBM8A	91	62.893	Carlito_syrichta
ENSCING00000004877	-	64	68.224	ENSCAPG00000014086	RBM8A	87	68.224	Cavia_aperea
ENSCING00000004877	-	93	63.291	ENSCPOG00000022453	RBM8A	99	59.412	Cavia_porcellus
ENSCING00000004877	-	89	64.238	ENSCCAG00000022460	-	91	62.264	Cebus_capucinus
ENSCING00000004877	-	89	64.901	ENSCCAG00000028589	-	91	62.893	Cebus_capucinus
ENSCING00000004877	-	89	64.901	ENSCATG00000021691	RBM8A	91	62.893	Cercocebus_atys
ENSCING00000004877	-	89	64.901	ENSCLAG00000000547	RBM8A	91	62.893	Chinchilla_lanigera
ENSCING00000004877	-	89	64.901	ENSCSAG00000001779	RBM8A	91	62.893	Chlorocebus_sabaeus
ENSCING00000004877	-	89	64.901	ENSCPBG00000007941	RBM8A	73	62.893	Chrysemys_picta_bellii
ENSCING00000004877	-	92	91.447	ENSCSAVG00000005685	-	94	91.613	Ciona_savignyi
ENSCING00000004877	-	89	64.901	ENSCANG00000042182	RBM8A	91	62.893	Colobus_angolensis_palliatus
ENSCING00000004877	-	91	56.051	ENSCGRG00001003032	-	91	55.280	Cricetulus_griseus_chok1gshd
ENSCING00000004877	-	89	64.901	ENSCGRG00001002681	-	91	62.893	Cricetulus_griseus_chok1gshd
ENSCING00000004877	-	89	64.901	ENSCGRG00000006832	-	91	62.893	Cricetulus_griseus_crigri
ENSCING00000004877	-	93	63.924	ENSCSEG00000011865	rbm8a	90	63.924	Cynoglossus_semilaevis
ENSCING00000004877	-	93	64.103	ENSCVAG00000020734	rbm8a	90	64.103	Cyprinodon_variegatus
ENSCING00000004877	-	91	64.516	ENSDARG00000016516	rbm8a	91	63.522	Danio_rerio
ENSCING00000004877	-	53	65.556	ENSDNOG00000025265	-	98	65.556	Dasypus_novemcinctus
ENSCING00000004877	-	89	64.901	ENSDORG00000027340	-	99	58.824	Dipodomys_ordii
ENSCING00000004877	-	100	51.479	FBgn0033378	tsu	93	53.896	Drosophila_melanogaster
ENSCING00000004877	-	91	56.494	ENSETEG00000017932	-	91	55.346	Echinops_telfairi
ENSCING00000004877	-	84	64.583	ENSETEG00000008411	-	81	64.583	Echinops_telfairi
ENSCING00000004877	-	91	66.452	ENSEBUG00000010386	rbm8a	89	66.452	Eptatretus_burgeri
ENSCING00000004877	-	89	64.901	ENSEASG00005007455	RBM8A	91	62.893	Equus_asinus_asinus
ENSCING00000004877	-	89	64.901	ENSECAG00000022024	RBM8A	91	62.893	Equus_caballus
ENSCING00000004877	-	89	40.397	ENSEEUG00000008823	RBM8A	91	39.623	Erinaceus_europaeus
ENSCING00000004877	-	91	65.161	ENSELUG00000012464	rbm8a	91	64.151	Esox_lucius
ENSCING00000004877	-	89	65.333	ENSFCAG00000033936	RBM8A	91	63.291	Felis_catus
ENSCING00000004877	-	89	64.901	ENSFDAG00000020821	RBM8A	91	62.893	Fukomys_damarensis
ENSCING00000004877	-	93	64.744	ENSFHEG00000013538	rbm8a	90	64.744	Fundulus_heteroclitus
ENSCING00000004877	-	82	64.234	ENSGMOG00000007353	rbm8a	87	64.234	Gadus_morhua
ENSCING00000004877	-	89	57.047	ENSGALG00000036283	RBM8A	91	56.410	Gallus_gallus
ENSCING00000004877	-	93	63.924	ENSGAFG00000021698	rbm8a	90	63.924	Gambusia_affinis
ENSCING00000004877	-	73	63.934	ENSGACG00000013157	rbm8a	87	63.504	Gasterosteus_aculeatus
ENSCING00000004877	-	89	64.901	ENSGAGG00000023769	RBM8A	91	62.893	Gopherus_agassizii
ENSCING00000004877	-	89	64.901	ENSGGOG00000037248	RBM8A	91	62.893	Gorilla_gorilla
ENSCING00000004877	-	95	63.750	ENSHBUG00000008827	rbm8a	99	63.924	Haplochromis_burtoni
ENSCING00000004877	-	89	64.901	ENSHGLG00000007303	RBM8A	91	62.893	Heterocephalus_glaber_female
ENSCING00000004877	-	89	64.901	ENSHGLG00100012468	RBM8A	91	62.893	Heterocephalus_glaber_male
ENSCING00000004877	-	91	64.052	ENSHCOG00000010122	rbm8a	91	63.694	Hippocampus_comes
ENSCING00000004877	-	91	64.286	ENSIPUG00000006525	rbm8a	82	62.893	Ictalurus_punctatus
ENSCING00000004877	-	89	64.901	ENSSTOG00000013917	RBM8A	91	62.893	Ictidomys_tridecemlineatus
ENSCING00000004877	-	89	64.901	ENSJJAG00000009488	-	91	62.893	Jaculus_jaculus
ENSCING00000004877	-	93	63.924	ENSKMAG00000014454	rbm8a	90	63.924	Kryptolebias_marmoratus
ENSCING00000004877	-	93	65.190	ENSLBEG00000015720	rbm8a	90	65.190	Labrus_bergylta
ENSCING00000004877	-	91	63.462	ENSLACG00000014365	RBM8A	92	61.728	Latimeria_chalumnae
ENSCING00000004877	-	91	65.161	ENSLOCG00000009082	rbm8a	91	64.151	Lepisosteus_oculatus
ENSCING00000004877	-	96	48.521	ENSLAFG00000011031	-	87	50.000	Loxodonta_africana
ENSCING00000004877	-	91	63.871	ENSLAFG00000021886	-	91	62.893	Loxodonta_africana
ENSCING00000004877	-	89	65.333	ENSMFAG00000045376	RBM8A	91	63.291	Macaca_fascicularis
ENSCING00000004877	-	95	59.880	ENSMMUG00000016051	RBM8A	99	60.843	Macaca_mulatta
ENSCING00000004877	-	89	64.901	ENSMNEG00000040422	RBM8A	91	62.893	Macaca_nemestrina
ENSCING00000004877	-	89	64.901	ENSMLEG00000039155	RBM8A	91	62.893	Mandrillus_leucophaeus
ENSCING00000004877	-	93	63.924	ENSMAMG00000010565	rbm8a	90	63.924	Mastacembelus_armatus
ENSCING00000004877	-	93	63.924	ENSMZEG00005016453	rbm8a	90	63.924	Maylandia_zebra
ENSCING00000004877	-	95	60.000	ENSMAUG00000016783	-	99	59.763	Mesocricetus_auratus
ENSCING00000004877	-	89	55.705	ENSMICG00000037163	-	93	55.705	Microcebus_murinus
ENSCING00000004877	-	89	64.901	ENSMICG00000031698	-	91	62.893	Microcebus_murinus
ENSCING00000004877	-	89	64.901	ENSMOCG00000017782	-	91	62.893	Microtus_ochrogaster
ENSCING00000004877	-	95	58.599	ENSMMOG00000017179	rbm8a	93	58.710	Mola_mola
ENSCING00000004877	-	89	64.238	ENSMODG00000018752	RBM8A	91	62.264	Monodelphis_domestica
ENSCING00000004877	-	93	64.557	ENSMALG00000010145	rbm8a	90	64.557	Monopterus_albus
ENSCING00000004877	-	89	63.576	MGP_CAROLIEiJ_G0014951	Rbm8a2	91	61.635	Mus_caroli
ENSCING00000004877	-	89	65.333	MGP_CAROLIEiJ_G0025383	Rbm8a	99	59.412	Mus_caroli
ENSCING00000004877	-	89	64.238	ENSMUSG00000078184	Rbm8a2	91	62.264	Mus_musculus
ENSCING00000004877	-	89	65.333	ENSMUSG00000038374	Rbm8a	99	60.000	Mus_musculus
ENSCING00000004877	-	89	65.333	MGP_PahariEiJ_G0026828	-	99	59.412	Mus_pahari
ENSCING00000004877	-	89	65.333	MGP_SPRETEiJ_G0026330	Rbm8a	99	60.000	Mus_spretus
ENSCING00000004877	-	89	64.901	ENSMPUG00000000775	RBM8A	91	62.893	Mustela_putorius_furo
ENSCING00000004877	-	89	64.901	ENSMLUG00000017436	-	91	62.893	Myotis_lucifugus
ENSCING00000004877	-	89	64.865	ENSMLUG00000022711	-	90	63.226	Myotis_lucifugus
ENSCING00000004877	-	91	63.871	ENSNGAG00000016038	-	91	62.893	Nannospalax_galili
ENSCING00000004877	-	93	63.924	ENSNBRG00000004541	rbm8a	90	63.924	Neolamprologus_brichardi
ENSCING00000004877	-	89	64.901	ENSNLEG00000029632	RBM8A	91	62.893	Nomascus_leucogenys
ENSCING00000004877	-	60	71.717	ENSMEUG00000016058	RBM8A	82	68.224	Notamacropus_eugenii
ENSCING00000004877	-	66	64.912	ENSOPRG00000013316	RBM8A	100	64.912	Ochotona_princeps
ENSCING00000004877	-	89	55.629	ENSODEG00000002094	-	91	54.088	Octodon_degus
ENSCING00000004877	-	89	64.901	ENSODEG00000000114	-	91	62.893	Octodon_degus
ENSCING00000004877	-	89	58.000	ENSODEG00000008563	-	91	56.329	Octodon_degus
ENSCING00000004877	-	93	63.924	ENSONIG00000008608	rbm8a	90	63.924	Oreochromis_niloticus
ENSCING00000004877	-	89	59.740	ENSOCUG00000025693	RBM8A	92	62.346	Oryctolagus_cuniculus
ENSCING00000004877	-	93	64.557	ENSORLG00000016263	rbm8a	90	64.557	Oryzias_latipes
ENSCING00000004877	-	97	62.805	ENSORLG00020012904	rbm8a	84	64.557	Oryzias_latipes_hni
ENSCING00000004877	-	93	64.557	ENSORLG00015018824	rbm8a	90	64.557	Oryzias_latipes_hsok
ENSCING00000004877	-	93	65.190	ENSOMEG00000021533	rbm8a	71	65.190	Oryzias_melastigma
ENSCING00000004877	-	89	59.740	ENSOGAG00000000202	RBM8A	92	62.346	Otolemur_garnettii
ENSCING00000004877	-	89	64.901	ENSOARG00000020634	RBM8A	91	62.893	Ovis_aries
ENSCING00000004877	-	89	64.901	ENSPPAG00000029116	RBM8A	91	62.893	Pan_paniscus
ENSCING00000004877	-	89	65.333	ENSPPRG00000008243	RBM8A	91	63.291	Panthera_pardus
ENSCING00000004877	-	89	64.901	ENSPTIG00000009472	RBM8A	91	62.893	Panthera_tigris_altaica
ENSCING00000004877	-	89	64.901	ENSPTRG00000001201	RBM8A	91	62.893	Pan_troglodytes
ENSCING00000004877	-	89	64.901	ENSPANG00000020584	RBM8A	91	62.893	Papio_anubis
ENSCING00000004877	-	91	64.516	ENSPKIG00000009551	rbm8a	68	64.151	Paramormyrops_kingsleyae
ENSCING00000004877	-	91	65.359	ENSPKIG00000020558	rbm8a	91	64.331	Paramormyrops_kingsleyae
ENSCING00000004877	-	93	64.557	ENSPMGG00000010122	rbm8a	90	64.557	Periophthalmus_magnuspinnatus
ENSCING00000004877	-	89	64.901	ENSPEMG00000018117	-	91	62.893	Peromyscus_maniculatus_bairdii
ENSCING00000004877	-	89	64.238	ENSPCIG00000011931	RBM8A	91	62.264	Phascolarctos_cinereus
ENSCING00000004877	-	93	64.557	ENSPFOG00000010695	rbm8a	90	64.557	Poecilia_formosa
ENSCING00000004877	-	93	64.557	ENSPLAG00000009183	rbm8a	90	64.557	Poecilia_latipinna
ENSCING00000004877	-	93	64.557	ENSPMEG00000013950	rbm8a	90	64.557	Poecilia_mexicana
ENSCING00000004877	-	95	63.750	ENSPREG00000017572	rbm8a	99	63.924	Poecilia_reticulata
ENSCING00000004877	-	89	64.901	ENSPPYG00000000929	RBM8A	91	62.893	Pongo_abelii
ENSCING00000004877	-	91	63.871	ENSPCAG00000002146	-	91	62.893	Procavia_capensis
ENSCING00000004877	-	89	64.901	ENSPCOG00000022886	RBM8A	91	62.893	Propithecus_coquereli
ENSCING00000004877	-	89	64.901	ENSPVAG00000014471	RBM8A	91	62.893	Pteropus_vampyrus
ENSCING00000004877	-	93	63.924	ENSPNYG00000013564	rbm8a	90	63.924	Pundamilia_nyererei
ENSCING00000004877	-	91	65.161	ENSPNAG00000028502	rbm8a	91	64.151	Pygocentrus_nattereri
ENSCING00000004877	-	89	64.901	ENSRNOG00000021215	Rbm8a	91	62.893	Rattus_norvegicus
ENSCING00000004877	-	89	65.333	ENSRBIG00000039233	RBM8A	91	63.291	Rhinopithecus_bieti
ENSCING00000004877	-	89	62.667	ENSRROG00000033023	-	91	60.759	Rhinopithecus_roxellana
ENSCING00000004877	-	89	64.901	ENSRROG00000040324	-	91	62.893	Rhinopithecus_roxellana
ENSCING00000004877	-	89	64.901	ENSSBOG00000031316	RBM8A	91	62.893	Saimiri_boliviensis_boliviensis
ENSCING00000004877	-	89	64.238	ENSSHAG00000018629	RBM8A	91	62.264	Sarcophilus_harrisii
ENSCING00000004877	-	91	65.806	ENSSFOG00015009007	rbm8a	91	64.780	Scleropages_formosus
ENSCING00000004877	-	91	64.516	ENSSFOG00015024171	rbm8a	91	64.151	Scleropages_formosus
ENSCING00000004877	-	93	63.291	ENSSMAG00000012998	rbm8a	90	63.291	Scophthalmus_maximus
ENSCING00000004877	-	93	64.557	ENSSDUG00000005911	rbm8a	90	64.557	Seriola_dumerili
ENSCING00000004877	-	93	64.557	ENSSLDG00000011664	rbm8a	90	64.557	Seriola_lalandi_dorsalis
ENSCING00000004877	-	89	64.901	ENSSARG00000013289	RBM8A	91	62.893	Sorex_araneus
ENSCING00000004877	-	89	65.563	ENSSPUG00000001576	RBM8A	91	63.522	Sphenodon_punctatus
ENSCING00000004877	-	93	64.557	ENSSPAG00000012181	rbm8a	90	64.557	Stegastes_partitus
ENSCING00000004877	-	89	64.901	ENSSSCG00000028509	RBM8A	91	62.893	Sus_scrofa
ENSCING00000004877	-	89	63.576	ENSTGUG00000004447	RBM8A	91	61.635	Taeniopygia_guttata
ENSCING00000004877	-	93	63.462	ENSTRUG00000013173	rbm8a	90	63.462	Takifugu_rubripes
ENSCING00000004877	-	93	63.291	ENSTNIG00000006869	rbm8a	90	63.291	Tetraodon_nigroviridis
ENSCING00000004877	-	66	64.912	ENSTBEG00000014947	RBM8A	100	64.912	Tupaia_belangeri
ENSCING00000004877	-	69	66.087	ENSTTRG00000009081	RBM8A	89	63.704	Tursiops_truncatus
ENSCING00000004877	-	89	64.901	ENSUAMG00000021929	RBM8A	91	62.893	Ursus_americanus
ENSCING00000004877	-	89	64.901	ENSUMAG00000010298	RBM8A	91	62.893	Ursus_maritimus
ENSCING00000004877	-	89	64.901	ENSVVUG00000007486	RBM8A	91	62.893	Vulpes_vulpes
ENSCING00000004877	-	93	63.924	ENSXCOG00000004369	rbm8a	90	63.924	Xiphophorus_couchianus
ENSCING00000004877	-	95	63.924	ENSXMAG00000013463	rbm8a	99	64.103	Xiphophorus_maculatus