EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000004961 (Gene tree)
Gene ID: 100183149
Gene Symbol: -
Alias: -
Full Name: rab-like protein 2A
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 3246 bases
Position: chr2:7551476-7554721
Accession: 100183149
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000010211	MMR_HSR1	PF01926.23	2.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000010211	-	1260	XM_002130538	ENSCINP00000010211	214 (aa)	XP_002130574	F6X9K2

Gene Model

Click here to download ENSCING00000004961's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000004961's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000004961	-	93	62.500	ENSG00000079974	RABL2B	92	63.736	Homo_sapiens
ENSCING00000004961	-	87	65.608	ENSG00000144134	RABL2A	93	65.094	Homo_sapiens
ENSCING00000004961	-	84	70.000	ENSAPOG00000023708	rabl2	81	70.000	Acanthochromis_polyacanthus
ENSCING00000004961	-	84	65.761	ENSAMEG00000003173	-	81	65.761	Ailuropoda_melanoleuca
ENSCING00000004961	-	87	66.321	ENSACIG00000000670	rabl2	87	66.321	Amphilophus_citrinellus
ENSCING00000004961	-	84	69.444	ENSAOCG00000008069	rabl2	81	69.444	Amphiprion_ocellaris
ENSCING00000004961	-	84	70.000	ENSAPEG00000003164	rabl2	81	70.000	Amphiprion_percula
ENSCING00000004961	-	84	70.556	ENSATEG00000001111	rabl2	81	70.556	Anabas_testudineus
ENSCING00000004961	-	72	73.377	ENSACAG00000000418	-	88	73.377	Anolis_carolinensis
ENSCING00000004961	-	88	64.921	ENSANAG00000021001	-	83	64.921	Aotus_nancymaae
ENSCING00000004961	-	87	68.817	ENSACLG00000025632	rabl2	84	68.817	Astatotilapia_calliptera
ENSCING00000004961	-	84	73.333	ENSAMXG00000040611	rabl2	81	73.333	Astyanax_mexicanus
ENSCING00000004961	-	84	66.111	ENSBTAG00000004876	RABL2B	82	64.516	Bos_taurus
ENSCING00000004961	-	87	65.426	ENSCJAG00000018414	-	82	65.426	Callithrix_jacchus
ENSCING00000004961	-	87	66.489	ENSCAFG00020006938	-	84	66.489	Canis_lupus_dingo
ENSCING00000004961	-	84	66.667	ENSCHIG00000000591	-	78	66.667	Capra_hircus
ENSCING00000004961	-	87	65.775	ENSTSYG00000004323	-	82	65.775	Carlito_syrichta
ENSCING00000004961	-	84	66.667	ENSCPOG00000026899	-	81	66.667	Cavia_porcellus
ENSCING00000004961	-	87	65.957	ENSCCAG00000025944	-	82	65.957	Cebus_capucinus
ENSCING00000004961	-	92	62.437	ENSCATG00000034307	-	86	62.437	Cercocebus_atys
ENSCING00000004961	-	87	67.553	ENSCLAG00000017218	-	84	67.553	Chinchilla_lanigera
ENSCING00000004961	-	92	62.944	ENSCSAG00000004698	-	85	62.944	Chlorocebus_sabaeus
ENSCING00000004961	-	84	70.000	ENSCPBG00000011715	-	80	70.000	Chrysemys_picta_bellii
ENSCING00000004961	-	97	88.889	ENSCSAVG00000006042	-	99	88.889	Ciona_savignyi
ENSCING00000004961	-	87	65.591	ENSCANG00000030879	-	81	65.591	Colobus_angolensis_palliatus
ENSCING00000004961	-	87	65.426	ENSCGRG00001021894	Rabl2	84	65.426	Cricetulus_griseus_chok1gshd
ENSCING00000004961	-	86	69.730	ENSCSEG00000005479	rabl2	79	71.910	Cynoglossus_semilaevis
ENSCING00000004961	-	90	67.188	ENSCVAG00000011432	rabl2	88	67.188	Cyprinodon_variegatus
ENSCING00000004961	-	89	68.394	ENSDARG00000063321	rabl2	88	68.394	Danio_rerio
ENSCING00000004961	-	84	68.333	ENSDNOG00000035151	-	81	68.333	Dasypus_novemcinctus
ENSCING00000004961	-	87	66.489	ENSDORG00000000003	Rabl2	84	66.489	Dipodomys_ordii
ENSCING00000004961	-	84	66.111	ENSEASG00005008239	-	81	66.111	Equus_asinus_asinus
ENSCING00000004961	-	84	66.111	ENSECAG00000026942	-	81	66.111	Equus_caballus
ENSCING00000004961	-	87	65.608	ENSFCAG00000033642	-	85	65.608	Felis_catus
ENSCING00000004961	-	84	68.333	ENSFDAG00000002113	-	81	68.333	Fukomys_damarensis
ENSCING00000004961	-	84	68.333	ENSFHEG00000015015	rabl2	68	68.333	Fundulus_heteroclitus
ENSCING00000004961	-	86	69.730	ENSGMOG00000018928	rabl2	94	69.730	Gadus_morhua
ENSCING00000004961	-	84	68.889	ENSGALG00000032458	RABL2B	81	68.889	Gallus_gallus
ENSCING00000004961	-	84	68.333	ENSGAFG00000005188	rabl2	84	67.914	Gambusia_affinis
ENSCING00000004961	-	84	67.778	ENSGACG00000012474	rabl2	81	67.778	Gasterosteus_aculeatus
ENSCING00000004961	-	87	68.817	ENSHBUG00000010964	rabl2	84	68.817	Haplochromis_burtoni
ENSCING00000004961	-	87	67.021	ENSHGLG00000005750	-	84	67.021	Heterocephalus_glaber_female
ENSCING00000004961	-	87	67.021	ENSHGLG00100016281	-	84	67.021	Heterocephalus_glaber_male
ENSCING00000004961	-	87	67.021	ENSSTOG00000002723	-	84	67.021	Ictidomys_tridecemlineatus
ENSCING00000004961	-	87	66.489	ENSJJAG00000010792	Rabl2	84	66.489	Jaculus_jaculus
ENSCING00000004961	-	90	67.188	ENSKMAG00000012723	rabl2	86	67.188	Kryptolebias_marmoratus
ENSCING00000004961	-	84	70.556	ENSLBEG00000003644	rabl2	81	70.556	Labrus_bergylta
ENSCING00000004961	-	90	68.750	ENSLACG00000003722	rabl2	86	68.750	Latimeria_chalumnae
ENSCING00000004961	-	90	67.188	ENSLOCG00000016767	rabl2	85	67.188	Lepisosteus_oculatus
ENSCING00000004961	-	92	62.944	ENSMFAG00000044775	-	86	62.944	Macaca_fascicularis
ENSCING00000004961	-	92	62.944	ENSMMUG00000022914	RABL2B	86	62.944	Macaca_mulatta
ENSCING00000004961	-	92	62.944	ENSMNEG00000028460	-	86	62.944	Macaca_nemestrina
ENSCING00000004961	-	92	62.437	ENSMLEG00000032621	-	86	62.437	Mandrillus_leucophaeus
ENSCING00000004961	-	84	72.222	ENSMAMG00000008168	rabl2	81	72.222	Mastacembelus_armatus
ENSCING00000004961	-	83	71.348	ENSMZEG00005019758	rabl2	82	71.348	Maylandia_zebra
ENSCING00000004961	-	87	65.957	ENSMAUG00000010955	Rabl2	85	65.957	Mesocricetus_auratus
ENSCING00000004961	-	87	67.196	ENSMICG00000031301	-	83	67.196	Microcebus_murinus
ENSCING00000004961	-	87	65.426	ENSMOCG00000002775	Rabl2	84	65.426	Microtus_ochrogaster
ENSCING00000004961	-	87	67.380	ENSMODG00000010838	-	85	67.380	Monodelphis_domestica
ENSCING00000004961	-	91	67.010	ENSMALG00000005944	rabl2	87	67.010	Monopterus_albus
ENSCING00000004961	-	87	65.957	MGP_CAROLIEiJ_G0020176	Rabl2	83	65.957	Mus_caroli
ENSCING00000004961	-	87	65.957	ENSMUSG00000022621	Rabl2	84	65.957	Mus_musculus
ENSCING00000004961	-	87	65.957	MGP_PahariEiJ_G0020181	Rabl2	84	65.957	Mus_pahari
ENSCING00000004961	-	87	65.957	MGP_SPRETEiJ_G0021073	Rabl2	84	65.957	Mus_spretus
ENSCING00000004961	-	91	63.776	ENSMPUG00000001806	-	88	63.776	Mustela_putorius_furo
ENSCING00000004961	-	84	66.111	ENSNGAG00000012843	Rabl2	78	66.111	Nannospalax_galili
ENSCING00000004961	-	87	68.817	ENSNBRG00000000489	rabl2	84	68.817	Neolamprologus_brichardi
ENSCING00000004961	-	87	65.079	ENSNLEG00000030435	-	83	65.079	Nomascus_leucogenys
ENSCING00000004961	-	86	68.280	ENSODEG00000015650	-	83	68.280	Octodon_degus
ENSCING00000004961	-	87	68.817	ENSONIG00000014885	rabl2	84	68.817	Oreochromis_niloticus
ENSCING00000004961	-	90	66.834	ENSORLG00000009874	rabl2	88	66.834	Oryzias_latipes
ENSCING00000004961	-	90	66.834	ENSORLG00020001721	rabl2	88	66.834	Oryzias_latipes_hni
ENSCING00000004961	-	90	67.337	ENSORLG00015014268	rabl2	88	67.337	Oryzias_latipes_hsok
ENSCING00000004961	-	87	67.188	ENSOMEG00000008576	rabl2	88	67.188	Oryzias_melastigma
ENSCING00000004961	-	87	67.196	ENSOGAG00000009123	-	83	67.196	Otolemur_garnettii
ENSCING00000004961	-	84	66.484	ENSPPRG00000014642	-	80	66.484	Panthera_pardus
ENSCING00000004961	-	87	65.608	ENSPTIG00000018747	-	85	65.608	Panthera_tigris_altaica
ENSCING00000004961	-	87	62.814	ENSPTRG00000014555	-	84	62.814	Pan_troglodytes
ENSCING00000004961	-	92	60.870	ENSPANG00000036121	-	87	60.870	Papio_anubis
ENSCING00000004961	-	88	67.513	ENSPKIG00000025372	rabl2	88	67.513	Paramormyrops_kingsleyae
ENSCING00000004961	-	92	65.306	ENSPSIG00000014041	-	87	65.306	Pelodiscus_sinensis
ENSCING00000004961	-	86	68.852	ENSPMGG00000012946	rabl2	89	68.852	Periophthalmus_magnuspinnatus
ENSCING00000004961	-	87	65.426	ENSPEMG00000024045	Rabl2	84	65.426	Peromyscus_maniculatus_bairdii
ENSCING00000004961	-	87	67.380	ENSPCIG00000012436	-	80	65.464	Phascolarctos_cinereus
ENSCING00000004961	-	87	65.128	ENSPFOG00000017960	rabl2	88	65.128	Poecilia_formosa
ENSCING00000004961	-	87	65.803	ENSPLAG00000015685	rabl2	88	65.803	Poecilia_latipinna
ENSCING00000004961	-	87	65.803	ENSPMEG00000004703	rabl2	88	65.803	Poecilia_mexicana
ENSCING00000004961	-	90	66.321	ENSPREG00000014761	rabl2	96	66.321	Poecilia_reticulata
ENSCING00000004961	-	93	64.500	ENSPPYG00000012000	-	87	64.500	Pongo_abelii
ENSCING00000004961	-	87	67.196	ENSPCOG00000024865	-	83	67.196	Propithecus_coquereli
ENSCING00000004961	-	87	61.692	ENSPVAG00000004539	-	84	61.692	Pteropus_vampyrus
ENSCING00000004961	-	87	68.817	ENSPNYG00000004845	rabl2	84	68.817	Pundamilia_nyererei
ENSCING00000004961	-	84	72.222	ENSPNAG00000024254	rabl2	81	72.222	Pygocentrus_nattereri
ENSCING00000004961	-	87	65.957	ENSRNOG00000013947	Rabl2	75	65.957	Rattus_norvegicus
ENSCING00000004961	-	87	65.591	ENSRBIG00000033607	-	81	65.591	Rhinopithecus_bieti
ENSCING00000004961	-	87	65.591	ENSRROG00000031130	-	81	65.591	Rhinopithecus_roxellana
ENSCING00000004961	-	87	65.957	ENSSBOG00000033266	-	82	65.957	Saimiri_boliviensis_boliviensis
ENSCING00000004961	-	84	70.556	ENSSFOG00015020738	rabl2	81	70.556	Scleropages_formosus
ENSCING00000004961	-	84	70.556	ENSSMAG00000004606	rabl2	81	70.556	Scophthalmus_maximus
ENSCING00000004961	-	84	71.111	ENSSDUG00000014765	rabl2	81	71.111	Seriola_dumerili
ENSCING00000004961	-	71	67.550	ENSSSCG00000025041	-	89	67.550	Sus_scrofa
ENSCING00000004961	-	92	64.000	ENSTGUG00000016028	-	96	64.000	Taeniopygia_guttata
ENSCING00000004961	-	84	70.556	ENSTRUG00000012454	rabl2	81	70.556	Takifugu_rubripes
ENSCING00000004961	-	87	68.984	ENSTNIG00000017951	rabl2	84	68.984	Tetraodon_nigroviridis
ENSCING00000004961	-	90	64.767	ENSUAMG00000015761	-	85	64.767	Ursus_americanus
ENSCING00000004961	-	84	67.222	ENSUMAG00000017116	-	81	67.222	Ursus_maritimus
ENSCING00000004961	-	87	66.489	ENSVVUG00000025761	-	84	66.489	Vulpes_vulpes
ENSCING00000004961	-	90	66.321	ENSXETG00000015712	rabl2b	86	66.321	Xenopus_tropicalis
ENSCING00000004961	-	84	68.889	ENSXMAG00000004569	rabl2	81	68.889	Xiphophorus_maculatus