EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000004991 (Gene tree)
Gene ID: 100177778
Gene Symbol: -
Alias: -
Full Name: DNA-directed RNA polymerase II subunit RPB7
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 519 bases
Position: chr3:1161237-1161755
Accession: 100177778
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000010264	S1	PF00575.23	1.4e-20	1	1
ENSCINP00000010264	SHS2_Rpb7-N	PF03876.17	4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000010264	-	519	-	ENSCINP00000010264	172 (aa)	XP_002120172	F6WM99

Gene Model

Click here to download ENSCING00000004991's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000004991's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000004991	-	100	91.860	ENSG00000168002	POLR2G	100	97.561	Homo_sapiens
ENSCING00000004991	-	98	90.533	ENSAPOG00000010949	polr2gl	99	90.533	Acanthochromis_polyacanthus
ENSCING00000004991	-	100	91.860	ENSAMEG00000006386	POLR2G	100	91.860	Ailuropoda_melanoleuca
ENSCING00000004991	-	98	90.533	ENSACIG00000007252	polr2gl	88	90.533	Amphilophus_citrinellus
ENSCING00000004991	-	100	91.860	ENSAOCG00000013628	polr2gl	100	91.860	Amphiprion_ocellaris
ENSCING00000004991	-	100	91.860	ENSAPEG00000011229	polr2gl	100	91.860	Amphiprion_percula
ENSCING00000004991	-	100	91.860	ENSATEG00000013382	polr2gl	100	91.860	Anabas_testudineus
ENSCING00000004991	-	97	92.814	ENSACAG00000001005	POLR2G	97	92.814	Anolis_carolinensis
ENSCING00000004991	-	100	91.860	ENSANAG00000037428	POLR2G	100	91.860	Aotus_nancymaae
ENSCING00000004991	-	100	92.442	ENSACLG00000014753	polr2gl	100	92.442	Astatotilapia_calliptera
ENSCING00000004991	-	100	91.860	ENSAMXG00000030439	polr2gl	100	91.860	Astyanax_mexicanus
ENSCING00000004991	-	100	91.860	ENSBTAG00000009483	POLR2G	100	91.860	Bos_taurus
ENSCING00000004991	-	99	77.647	WBGene00021845	rpb-7	86	77.647	Caenorhabditis_elegans
ENSCING00000004991	-	100	91.860	ENSCJAG00000018688	POLR2G	100	91.860	Callithrix_jacchus
ENSCING00000004991	-	55	94.737	ENSCAFG00000015461	POLR2G	81	94.737	Canis_familiaris
ENSCING00000004991	-	100	91.860	ENSCAFG00020013136	POLR2G	100	91.860	Canis_lupus_dingo
ENSCING00000004991	-	98	92.308	ENSCHIG00000023730	POLR2G	89	92.308	Capra_hircus
ENSCING00000004991	-	100	91.279	ENSTSYG00000011918	POLR2G	100	91.279	Carlito_syrichta
ENSCING00000004991	-	76	90.076	ENSCAPG00000017572	POLR2G	100	90.076	Cavia_aperea
ENSCING00000004991	-	100	91.860	ENSCPOG00000036420	POLR2G	100	91.860	Cavia_porcellus
ENSCING00000004991	-	100	83.140	ENSCCAG00000033483	-	95	83.140	Cebus_capucinus
ENSCING00000004991	-	100	91.860	ENSCATG00000034443	POLR2G	100	91.860	Cercocebus_atys
ENSCING00000004991	-	100	91.860	ENSCLAG00000000802	POLR2G	100	91.860	Chinchilla_lanigera
ENSCING00000004991	-	100	91.860	ENSCSAG00000006715	POLR2G	100	91.860	Chlorocebus_sabaeus
ENSCING00000004991	-	77	91.729	ENSCHOG00000009928	POLR2G	100	91.729	Choloepus_hoffmanni
ENSCING00000004991	-	100	91.860	ENSCPBG00000017972	POLR2G	100	91.860	Chrysemys_picta_bellii
ENSCING00000004991	-	100	94.767	ENSCSAVG00000002667	-	100	94.767	Ciona_savignyi
ENSCING00000004991	-	100	91.860	ENSCANG00000043203	POLR2G	100	91.860	Colobus_angolensis_palliatus
ENSCING00000004991	-	100	91.860	ENSCGRG00001022692	-	100	91.860	Cricetulus_griseus_chok1gshd
ENSCING00000004991	-	100	85.465	ENSCGRG00001011370	-	100	85.465	Cricetulus_griseus_chok1gshd
ENSCING00000004991	-	100	91.860	ENSCGRG00000015350	Polr2g	100	91.860	Cricetulus_griseus_crigri
ENSCING00000004991	-	98	92.262	ENSCSEG00000011991	polr2gl	90	92.262	Cynoglossus_semilaevis
ENSCING00000004991	-	100	91.860	ENSCVAG00000021090	polr2gl	100	91.860	Cyprinodon_variegatus
ENSCING00000004991	-	100	92.442	ENSDARG00000056127	polr2gl	100	92.442	Danio_rerio
ENSCING00000004991	-	100	91.860	ENSDNOG00000043426	POLR2G	100	91.860	Dasypus_novemcinctus
ENSCING00000004991	-	100	88.372	ENSDORG00000010351	-	100	88.372	Dipodomys_ordii
ENSCING00000004991	-	100	56.395	ENSDORG00000015696	-	100	56.395	Dipodomys_ordii
ENSCING00000004991	-	100	80.814	FBgn0051155	Rpb7	99	80.814	Drosophila_melanogaster
ENSCING00000004991	-	100	74.419	ENSETEG00000019637	POLR2G	100	74.419	Echinops_telfairi
ENSCING00000004991	-	100	90.116	ENSEBUG00000000439	-	86	90.116	Eptatretus_burgeri
ENSCING00000004991	-	100	91.860	ENSEASG00005011357	POLR2G	100	91.860	Equus_asinus_asinus
ENSCING00000004991	-	98	92.308	ENSECAG00000021465	POLR2G	87	92.308	Equus_caballus
ENSCING00000004991	-	100	62.209	ENSEEUG00000007416	POLR2G	100	62.209	Erinaceus_europaeus
ENSCING00000004991	-	100	91.860	ENSELUG00000003401	polr2g	100	91.860	Esox_lucius
ENSCING00000004991	-	100	91.860	ENSFCAG00000026072	POLR2G	62	91.860	Felis_catus
ENSCING00000004991	-	100	91.860	ENSFDAG00000020977	POLR2G	100	91.860	Fukomys_damarensis
ENSCING00000004991	-	100	91.279	ENSFHEG00000003053	polr2gl	100	91.279	Fundulus_heteroclitus
ENSCING00000004991	-	95	92.073	ENSGMOG00000000535	polr2gl	100	92.073	Gadus_morhua
ENSCING00000004991	-	95	90.854	ENSGAFG00000001773	polr2gl	98	90.854	Gambusia_affinis
ENSCING00000004991	-	100	91.860	ENSGACG00000017706	polr2gl	100	91.860	Gasterosteus_aculeatus
ENSCING00000004991	-	98	91.667	ENSGAGG00000001303	POLR2G	100	91.667	Gopherus_agassizii
ENSCING00000004991	-	100	91.860	ENSGGOG00000011739	POLR2G	100	91.860	Gorilla_gorilla
ENSCING00000004991	-	98	91.124	ENSHBUG00000011421	polr2gl	93	91.124	Haplochromis_burtoni
ENSCING00000004991	-	100	91.860	ENSHGLG00000004851	POLR2G	100	91.860	Heterocephalus_glaber_female
ENSCING00000004991	-	100	86.628	ENSHGLG00100018441	POLR2G	100	86.628	Heterocephalus_glaber_male
ENSCING00000004991	-	100	91.860	ENSHCOG00000009499	polr2gl	91	91.860	Hippocampus_comes
ENSCING00000004991	-	100	92.442	ENSIPUG00000000671	polr2g	100	92.442	Ictalurus_punctatus
ENSCING00000004991	-	100	90.698	ENSSTOG00000004391	POLR2G	100	90.698	Ictidomys_tridecemlineatus
ENSCING00000004991	-	100	91.860	ENSJJAG00000005019	Polr2g	100	91.860	Jaculus_jaculus
ENSCING00000004991	-	98	92.308	ENSKMAG00000011056	polr2gl	89	92.308	Kryptolebias_marmoratus
ENSCING00000004991	-	100	91.860	ENSLBEG00000001458	polr2gl	100	91.860	Labrus_bergylta
ENSCING00000004991	-	100	91.279	ENSLACG00000006420	POLR2G	100	91.279	Latimeria_chalumnae
ENSCING00000004991	-	100	91.860	ENSLAFG00000004354	POLR2G	100	91.860	Loxodonta_africana
ENSCING00000004991	-	100	91.860	ENSMFAG00000033674	POLR2G	100	91.860	Macaca_fascicularis
ENSCING00000004991	-	100	91.860	ENSMMUG00000014368	POLR2G	100	91.860	Macaca_mulatta
ENSCING00000004991	-	100	91.860	ENSMNEG00000041523	POLR2G	100	91.860	Macaca_nemestrina
ENSCING00000004991	-	100	91.860	ENSMLEG00000032928	POLR2G	100	91.860	Mandrillus_leucophaeus
ENSCING00000004991	-	95	91.463	ENSMAMG00000001188	polr2gl	100	91.463	Mastacembelus_armatus
ENSCING00000004991	-	100	92.442	ENSMZEG00005003618	polr2gl	100	92.442	Maylandia_zebra
ENSCING00000004991	-	55	94.681	ENSMAUG00000013079	Polr2g	100	94.681	Mesocricetus_auratus
ENSCING00000004991	-	100	91.860	ENSMICG00000009967	POLR2G	100	91.860	Microcebus_murinus
ENSCING00000004991	-	99	87.647	ENSMOCG00000010638	Polr2g	98	87.647	Microtus_ochrogaster
ENSCING00000004991	-	98	92.308	ENSMMOG00000003102	polr2gl	93	92.308	Mola_mola
ENSCING00000004991	-	98	92.308	ENSMODG00000007984	POLR2G	98	92.308	Monodelphis_domestica
ENSCING00000004991	-	100	91.860	ENSMALG00000013385	polr2gl	100	91.860	Monopterus_albus
ENSCING00000004991	-	100	91.860	MGP_CAROLIEiJ_G0022653	Polr2g	100	91.860	Mus_caroli
ENSCING00000004991	-	100	91.860	ENSMUSG00000071662	Polr2g	100	91.860	Mus_musculus
ENSCING00000004991	-	100	91.860	MGP_PahariEiJ_G0014148	Polr2g	100	91.860	Mus_pahari
ENSCING00000004991	-	100	91.860	MGP_SPRETEiJ_G0023566	Polr2g	100	91.860	Mus_spretus
ENSCING00000004991	-	100	91.860	ENSMPUG00000013667	POLR2G	100	91.860	Mustela_putorius_furo
ENSCING00000004991	-	100	91.860	ENSMLUG00000011039	-	100	91.860	Myotis_lucifugus
ENSCING00000004991	-	100	91.279	ENSMLUG00000003971	-	100	91.279	Myotis_lucifugus
ENSCING00000004991	-	100	91.860	ENSNGAG00000020624	Polr2g	100	91.860	Nannospalax_galili
ENSCING00000004991	-	94	89.506	ENSNBRG00000003949	polr2gl	100	89.506	Neolamprologus_brichardi
ENSCING00000004991	-	98	73.373	ENSNLEG00000004097	-	91	73.373	Nomascus_leucogenys
ENSCING00000004991	-	98	92.262	ENSMEUG00000011547	POLR2G	100	92.262	Notamacropus_eugenii
ENSCING00000004991	-	100	74.419	ENSOPRG00000014769	POLR2G	100	74.419	Ochotona_princeps
ENSCING00000004991	-	91	82.692	ENSODEG00000018495	-	100	82.692	Octodon_degus
ENSCING00000004991	-	100	66.279	ENSODEG00000005609	-	100	66.279	Octodon_degus
ENSCING00000004991	-	100	91.860	ENSODEG00000002048	-	100	91.860	Octodon_degus
ENSCING00000004991	-	100	91.860	ENSONIG00000005183	polr2gl	100	91.860	Oreochromis_niloticus
ENSCING00000004991	-	100	91.860	ENSOANG00000005808	POLR2G	100	91.860	Ornithorhynchus_anatinus
ENSCING00000004991	-	100	91.860	ENSOCUG00000009485	POLR2G	100	91.860	Oryctolagus_cuniculus
ENSCING00000004991	-	100	91.860	ENSORLG00000003154	polr2gl	100	91.860	Oryzias_latipes
ENSCING00000004991	-	98	90.533	ENSORLG00020017682	polr2gl	99	90.533	Oryzias_latipes_hni
ENSCING00000004991	-	100	91.860	ENSORLG00015018537	polr2gl	100	91.860	Oryzias_latipes_hsok
ENSCING00000004991	-	100	91.860	ENSOMEG00000020086	polr2gl	100	91.860	Oryzias_melastigma
ENSCING00000004991	-	100	76.136	ENSOGAG00000032720	POLR2G	100	76.136	Otolemur_garnettii
ENSCING00000004991	-	98	90.588	ENSOARG00000016984	POLR2G	81	90.588	Ovis_aries
ENSCING00000004991	-	100	91.860	ENSPPAG00000039868	POLR2G	100	91.860	Pan_paniscus
ENSCING00000004991	-	100	91.860	ENSPPRG00000005669	POLR2G	100	91.860	Panthera_pardus
ENSCING00000004991	-	100	88.000	ENSPTIG00000015781	POLR2G	100	88.000	Panthera_tigris_altaica
ENSCING00000004991	-	100	91.860	ENSPANG00000025888	POLR2G	100	91.860	Papio_anubis
ENSCING00000004991	-	98	92.308	ENSPKIG00000000902	polr2gl	90	91.124	Paramormyrops_kingsleyae
ENSCING00000004991	-	100	91.860	ENSPSIG00000004285	POLR2G	82	91.860	Pelodiscus_sinensis
ENSCING00000004991	-	100	91.860	ENSPMGG00000008462	polr2gl	100	91.860	Periophthalmus_magnuspinnatus
ENSCING00000004991	-	100	91.860	ENSPEMG00000000685	Polr2g	100	91.860	Peromyscus_maniculatus_bairdii
ENSCING00000004991	-	100	91.860	ENSPCIG00000015245	-	100	91.860	Phascolarctos_cinereus
ENSCING00000004991	-	60	87.379	ENSPFOG00000024274	polr2gl	94	87.379	Poecilia_formosa
ENSCING00000004991	-	98	91.716	ENSPLAG00000022848	polr2gl	95	91.716	Poecilia_latipinna
ENSCING00000004991	-	100	91.279	ENSPMEG00000009317	polr2gl	100	91.279	Poecilia_mexicana
ENSCING00000004991	-	100	91.279	ENSPREG00000016633	polr2gl	100	91.279	Poecilia_reticulata
ENSCING00000004991	-	100	81.714	ENSPPYG00000003147	POLR2G	100	81.714	Pongo_abelii
ENSCING00000004991	-	100	91.860	ENSPCAG00000016408	POLR2G	100	91.860	Procavia_capensis
ENSCING00000004991	-	100	91.860	ENSPCOG00000024131	POLR2G	100	91.860	Propithecus_coquereli
ENSCING00000004991	-	100	91.279	ENSPVAG00000003481	POLR2G	100	91.279	Pteropus_vampyrus
ENSCING00000004991	-	100	92.442	ENSPNYG00000016136	polr2gl	100	92.442	Pundamilia_nyererei
ENSCING00000004991	-	100	91.860	ENSPNAG00000025210	polr2gl	100	91.860	Pygocentrus_nattereri
ENSCING00000004991	-	100	91.860	ENSRNOG00000019439	Polr2g	100	91.860	Rattus_norvegicus
ENSCING00000004991	-	100	91.860	ENSRBIG00000009173	POLR2G	100	91.860	Rhinopithecus_bieti
ENSCING00000004991	-	98	91.124	ENSRROG00000033543	POLR2G	88	74.713	Rhinopithecus_roxellana
ENSCING00000004991	-	99	42.197	YDR404C	RPB7	100	42.197	Saccharomyces_cerevisiae
ENSCING00000004991	-	100	91.860	ENSSBOG00000015220	POLR2G	100	91.860	Saimiri_boliviensis_boliviensis
ENSCING00000004991	-	100	91.860	ENSSHAG00000006006	POLR2G	100	91.860	Sarcophilus_harrisii
ENSCING00000004991	-	100	91.860	ENSSFOG00015001245	polr2g	100	91.860	Scleropages_formosus
ENSCING00000004991	-	100	91.860	ENSSMAG00000001197	polr2gl	100	91.860	Scophthalmus_maximus
ENSCING00000004991	-	100	91.860	ENSSDUG00000015179	polr2gl	100	91.860	Seriola_dumerili
ENSCING00000004991	-	100	91.860	ENSSLDG00000001822	polr2gl	100	91.860	Seriola_lalandi_dorsalis
ENSCING00000004991	-	100	91.860	ENSSPUG00000008614	POLR2G	100	91.860	Sphenodon_punctatus
ENSCING00000004991	-	98	92.308	ENSSPAG00000015276	polr2gl	99	92.308	Stegastes_partitus
ENSCING00000004991	-	100	91.860	ENSSSCG00000025571	POLR2G	100	91.860	Sus_scrofa
ENSCING00000004991	-	77	90.226	ENSTGUG00000014456	POLR2G	100	90.226	Taeniopygia_guttata
ENSCING00000004991	-	100	91.860	ENSTRUG00000002492	polr2gl	100	91.860	Takifugu_rubripes
ENSCING00000004991	-	100	75.000	ENSTBEG00000015752	POLR2G	100	75.000	Tupaia_belangeri
ENSCING00000004991	-	100	91.860	ENSTTRG00000002478	POLR2G	100	91.860	Tursiops_truncatus
ENSCING00000004991	-	100	91.860	ENSUAMG00000025968	POLR2G	100	91.860	Ursus_americanus
ENSCING00000004991	-	65	95.495	ENSUMAG00000014537	POLR2G	66	95.495	Ursus_maritimus
ENSCING00000004991	-	76	86.923	ENSVPAG00000009534	POLR2G	100	86.923	Vicugna_pacos
ENSCING00000004991	-	100	91.860	ENSVVUG00000029844	POLR2G	100	91.860	Vulpes_vulpes
ENSCING00000004991	-	100	92.442	ENSXETG00000006022	polr2g	100	92.442	Xenopus_tropicalis
ENSCING00000004991	-	98	91.716	ENSXCOG00000002005	polr2gl	93	91.716	Xiphophorus_couchianus
ENSCING00000004991	-	98	91.716	ENSXMAG00000010063	polr2gl	93	91.716	Xiphophorus_maculatus