EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCING00000005006 (Gene tree)
Gene ID
778821
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_intestinalis
Status
putative
Strand
Plus strand
Length
5527 bases
Position
chr3:6104096-6109622
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCINP00000010340zf-C2H2PF00096.261.7e-2515
ENSCINP00000010340zf-C2H2PF00096.261.7e-2525
ENSCINP00000010340zf-C2H2PF00096.261.7e-2535
ENSCINP00000010340zf-C2H2PF00096.261.7e-2545
ENSCINP00000010340zf-C2H2PF00096.261.7e-2555
ENSCINP00000010340zf-metPF12874.72.3e-0812
ENSCINP00000010340zf-metPF12874.72.3e-0822
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCINT00000010340-2294-ENSCINP00000010340513 (aa)-F6TAS2
Gene Model
Click here to download ENSCING00000005006's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000005006's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCING00000005006-9344.000ENSG00000130856ZNF2367044.000Homo_sapiens
ENSCING00000005006-9546.875ENSAPOG00000005097znf2367246.875Acanthochromis_polyacanthus
ENSCING00000005006-9343.333ENSAMEG00000010549ZNF2366443.333Ailuropoda_melanoleuca
ENSCING00000005006-9539.024ENSACIG00000014123znf2367839.024Amphilophus_citrinellus
ENSCING00000005006-9746.094ENSAOCG00000022004znf2367546.094Amphiprion_ocellaris
ENSCING00000005006-9546.094ENSAPEG00000019026znf2367246.094Amphiprion_percula
ENSCING00000005006-8746.094ENSATEG00000024503znf2367443.038Anabas_testudineus
ENSCING00000005006-8844.762ENSAPLG00000014682ZNF2366741.772Anas_platyrhynchos
ENSCING00000005006-9344.000ENSANAG00000022552ZNF2366844.000Aotus_nancymaae
ENSCING00000005006-7350.000ENSBTAG00000017517ZNF2367550.000Bos_taurus
ENSCING00000005006-9344.000ENSCJAG00000008039ZNF2366444.000Callithrix_jacchus
ENSCING00000005006-9450.862ENSCAFG00000000017ZNF2366950.862Canis_familiaris
ENSCING00000005006-9343.333ENSCAFG00020015152ZNF2366743.333Canis_lupus_dingo
ENSCING00000005006-9450.000ENSCHIG00000000391ZNF2367550.000Capra_hircus
ENSCING00000005006-9344.000ENSCAPG00000009816ZNF2366844.000Cavia_aperea
ENSCING00000005006-9344.000ENSCPOG00000008424ZNF2366844.000Cavia_porcellus
ENSCING00000005006-9644.000ENSCCAG00000026594ZNF2366944.000Cebus_capucinus
ENSCING00000005006-9344.000ENSCATG00000033072ZNF2366844.000Cercocebus_atys
ENSCING00000005006-9344.000ENSCLAG00000007793ZNF2366844.000Chinchilla_lanigera
ENSCING00000005006-9344.000ENSCSAG00000018240ZNF2366944.000Chlorocebus_sabaeus
ENSCING00000005006-9844.000ENSCPBG00000003495ZNF2367344.000Chrysemys_picta_bellii
ENSCING00000005006-9344.000ENSCANG00000033317ZNF2366744.000Colobus_angolensis_palliatus
ENSCING00000005006-8844.762ENSCGRG00001012398Zfp2366944.000Cricetulus_griseus_chok1gshd
ENSCING00000005006-8844.762ENSCGRG00000009462Zfp2367044.000Cricetulus_griseus_crigri
ENSCING00000005006-9547.581ENSCSEG00000011586znf2367547.407Cynoglossus_semilaevis
ENSCING00000005006-9442.683ENSDARG00000095890znf2367142.683Danio_rerio
ENSCING00000005006-9450.862ENSEASG00005002084ZNF2366750.862Equus_asinus_asinus
ENSCING00000005006-9350.862ENSECAG00000005459ZNF2366750.862Equus_caballus
ENSCING00000005006-9447.328ENSELUG00000020211znf2367747.328Esox_lucius
ENSCING00000005006-8744.762ENSFCAG00000001780ZNF2366644.000Felis_catus
ENSCING00000005006-8844.762ENSFALG00000004682ZNF2367640.805Ficedula_albicollis
ENSCING00000005006-9344.000ENSFDAG00000007103ZNF2367144.000Fukomys_damarensis
ENSCING00000005006-9548.760ENSFHEG00000008286znf2367348.760Fundulus_heteroclitus
ENSCING00000005006-9448.760ENSGMOG00000006668znf2367348.760Gadus_morhua
ENSCING00000005006-9548.980ENSGALG00000013657ZNF2366844.000Gallus_gallus
ENSCING00000005006-9445.312ENSGACG00000005553znf2369644.000Gasterosteus_aculeatus
ENSCING00000005006-9644.000ENSGAGG00000003883ZNF2367244.000Gopherus_agassizii
ENSCING00000005006-9344.000ENSGGOG00000008826ZNF2367044.000Gorilla_gorilla
ENSCING00000005006-9346.094ENSHBUG00000009837znf2367346.094Haplochromis_burtoni
ENSCING00000005006-9344.000ENSHGLG00000000648ZNF2366844.000Heterocephalus_glaber_female
ENSCING00000005006-9344.000ENSHGLG00100004852ZNF2366844.000Heterocephalus_glaber_male
ENSCING00000005006-9345.312ENSHCOG00000010282znf2367245.312Hippocampus_comes
ENSCING00000005006-9344.000ENSSTOG00000006987ZNF2367144.000Ictidomys_tridecemlineatus
ENSCING00000005006-9350.862ENSJJAG00000017493Zfp2366850.862Jaculus_jaculus
ENSCING00000005006-8746.094ENSKMAG00000021817znf2367646.094Kryptolebias_marmoratus
ENSCING00000005006-7440.588ENSLBEG00000005307znf2367440.588Labrus_bergylta
ENSCING00000005006-8847.059ENSLACG00000010627ZNF2365545.455Latimeria_chalumnae
ENSCING00000005006-9650.000ENSLOCG00000003926znf2367050.000Lepisosteus_oculatus
ENSCING00000005006-9344.000ENSMFAG00000044643ZNF2366844.000Macaca_fascicularis
ENSCING00000005006-9344.000ENSMMUG00000011329ZNF2366744.000Macaca_mulatta
ENSCING00000005006-9344.000ENSMNEG00000038296ZNF2367044.000Macaca_nemestrina
ENSCING00000005006-9344.000ENSMLEG00000034779ZNF2366744.000Mandrillus_leucophaeus
ENSCING00000005006-9444.304ENSMAMG00000001157znf2366944.304Mastacembelus_armatus
ENSCING00000005006-9546.094ENSMZEG00005007366znf2367646.094Maylandia_zebra
ENSCING00000005006-9344.000ENSMOCG00000022870Zfp2367044.000Microtus_ochrogaster
ENSCING00000005006-8846.875ENSMMOG00000003268znf2367446.875Mola_mola
ENSCING00000005006-9450.862ENSMODG00000012304ZNF2366550.862Monodelphis_domestica
ENSCING00000005006-8746.875ENSMALG00000003588znf2367246.875Monopterus_albus
ENSCING00000005006-9344.000MGP_CAROLIEiJ_G0022445Zfp2366844.000Mus_caroli
ENSCING00000005006-9344.000ENSMUSG00000041258Zfp2366744.000Mus_musculus
ENSCING00000005006-9344.000MGP_PahariEiJ_G0019173Zfp2366744.000Mus_pahari
ENSCING00000005006-9344.000MGP_SPRETEiJ_G0023360Zfp2367044.000Mus_spretus
ENSCING00000005006-9343.333ENSMPUG00000016639ZNF2366843.333Mustela_putorius_furo
ENSCING00000005006-9343.810ENSMLUG00000011089ZNF2366543.810Myotis_lucifugus
ENSCING00000005006-9344.000ENSNGAG00000011056Zfp2367044.000Nannospalax_galili
ENSCING00000005006-9442.667ENSNBRG00000009075znf2368942.667Neolamprologus_brichardi
ENSCING00000005006-9344.000ENSNLEG00000009319ZNF2366944.000Nomascus_leucogenys
ENSCING00000005006-9446.094ENSONIG00000007298znf2367346.094Oreochromis_niloticus
ENSCING00000005006-9351.724ENSOANG00000005983ZNF2367044.578Ornithorhynchus_anatinus
ENSCING00000005006-9344.000ENSOCUG00000009378ZNF2367144.000Oryctolagus_cuniculus
ENSCING00000005006-9445.312ENSORLG00020001912znf2367545.312Oryzias_latipes_hni
ENSCING00000005006-8746.094ENSORLG00015018340znf2367946.094Oryzias_latipes_hsok
ENSCING00000005006-9344.000ENSOGAG00000027487ZNF2366844.000Otolemur_garnettii
ENSCING00000005006-8744.762ENSOARG00000004433ZNF2367544.762Ovis_aries
ENSCING00000005006-9344.000ENSPPAG00000038362ZNF2366744.000Pan_paniscus
ENSCING00000005006-8744.762ENSPPRG00000012906ZNF2366744.000Panthera_pardus
ENSCING00000005006-7344.762ENSPTIG00000011566ZNF2366542.857Panthera_tigris_altaica
ENSCING00000005006-9344.000ENSPTRG00000010123ZNF2367044.000Pan_troglodytes
ENSCING00000005006-9352.586ENSPKIG00000018168znf2367552.586Paramormyrops_kingsleyae
ENSCING00000005006-7341.573ENSPMGG00000016966znf2367841.573Periophthalmus_magnuspinnatus
ENSCING00000005006-9344.000ENSPPYG00000009250ZNF2366744.000Pongo_abelii
ENSCING00000005006-7342.593ENSPCAG00000008132ZNF2365342.593Procavia_capensis
ENSCING00000005006-9344.000ENSPCOG00000003371ZNF2366944.000Propithecus_coquereli
ENSCING00000005006-9343.210ENSPVAG00000008193ZNF2366343.210Pteropus_vampyrus
ENSCING00000005006-9643.038ENSPNYG00000012877znf2368542.667Pundamilia_nyererei
ENSCING00000005006-9442.157ENSPNAG00000017138znf2369647.273Pygocentrus_nattereri
ENSCING00000005006-9344.000ENSRBIG00000041864ZNF2366844.000Rhinopithecus_bieti
ENSCING00000005006-9344.000ENSRROG00000038700ZNF2366744.000Rhinopithecus_roxellana
ENSCING00000005006-9344.000ENSSBOG00000029994ZNF2367444.000Saimiri_boliviensis_boliviensis
ENSCING00000005006-9343.519ENSSHAG00000013079ZNF2366343.519Sarcophilus_harrisii
ENSCING00000005006-8853.448ENSSFOG00015008994znf2367653.448Scleropages_formosus
ENSCING00000005006-8844.304ENSSMAG00000007561znf2368044.304Scophthalmus_maximus
ENSCING00000005006-9544.304ENSSDUG00000011170znf2366944.304Seriola_dumerili
ENSCING00000005006-7646.875ENSSLDG00000012821znf2367446.875Seriola_lalandi_dorsalis
ENSCING00000005006-8842.667ENSSPUG00000000709ZNF2366842.667Sphenodon_punctatus
ENSCING00000005006-9850.862ENSSSCG00000023533ZNF2367050.862Sus_scrofa
ENSCING00000005006-8844.762ENSTGUG00000009074ZNF2367144.000Taeniopygia_guttata
ENSCING00000005006-8841.772ENSTRUG00000017456znf2367241.772Takifugu_rubripes
ENSCING00000005006-7344.762ENSTBEG00000014726ZNF2365644.000Tupaia_belangeri
ENSCING00000005006-9343.519ENSUAMG00000015472ZNF2366743.519Ursus_americanus
ENSCING00000005006-9450.862ENSVVUG00000018724ZNF2366650.862Vulpes_vulpes
ENSCING00000005006-9746.400ENSXMAG00000026111znf2368746.400Xiphophorus_maculatus

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